RNA–Protein interactions for RNA: ENST00000585799.5

SMARCA4-208, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 2

Gene SMARCA4, Length 3,842 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-208ENST00000585799 LTAP01374 205 aa9.68□□□□□ -0.86
SMARCA4-208ENST00000585799 EVI2AP22794 236 aa9.68□□□□□ -0.86
SMARCA4-208ENST00000585799 SPATA45Q537H7 98 aa9.68□□□□□ -0.86
SMARCA4-208ENST00000585799 AMN1Q8IY45 258 aa9.68□□□□□ -0.86
SMARCA4-208ENST00000585799 ZNF664Q8N3J9 261 aa9.68□□□□□ -0.86
SMARCA4-208ENST00000585799 C18orf32Q8TCD1 76 aa9.68□□□□□ -0.86
SMARCA4-208ENST00000585799 C14orf144Q96I85 54 aa9.68□□□□□ -0.86
SMARCA4-208ENST00000585799 NACAE9PAV3 2078 aa9.67□□□□□ -0.86
SMARCA4-208ENST00000585799 F6UB75 175 aa9.67□□□□□ -0.86
SMARCA4-208ENST00000585799 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa9.67□□□□□ -0.86
SMARCA4-208ENST00000585799 Q6ZS46 218 aa9.67□□□□□ -0.86
SMARCA4-208ENST00000585799 LYPD1Q8N2G4 141 aa9.67□□□□□ -0.86
SMARCA4-208ENST00000585799 AP5S1Q9NUS5 200 aa9.67□□□□□ -0.86
SMARCA4-208ENST00000585799 HECTD1Q9ULT8 2610 aa9.67□□□□□ -0.86
SMARCA4-208ENST00000585799 PRR25Q96S07 402 aa9.67□□□□□ -0.86
SMARCA4-208ENST00000585799 PRSS22Q9GZN4 317 aa9.67□□□□□ -0.86
SMARCA4-208ENST00000585799 PAX1P15863 534 aa9.67□□□□□ -0.86
SMARCA4-208ENST00000585799 G0S2P27469 103 aa9.67□□□□□ -0.86
SMARCA4-208ENST00000585799 HIST2H2BDQ6DRA6 164 aa9.67□□□□□ -0.86
SMARCA4-208ENST00000585799 C8orf86Q6ZUL3 223 aa9.67□□□□□ -0.86
SMARCA4-208ENST00000585799 FAM231DQ6ZW35 169 aa9.67□□□□□ -0.86
SMARCA4-208ENST00000585799 CFAP46Q8IYW2 2715 aa9.67□□□□□ -0.86
SMARCA4-208ENST00000585799 WI2-2373I1.2A0A1W2PRP0 233 aa9.66□□□□□ -0.86
SMARCA4-208ENST00000585799 AVPP01185 164 aa9.66□□□□□ -0.86
SMARCA4-208ENST00000585799 PRSS1P07477 247 aa9.66□□□□□ -0.86
SMARCA4-208ENST00000585799 SMIM17P0DL12 118 aa9.66□□□□□ -0.86
SMARCA4-208ENST00000585799 SYNJ2BPP57105 145 aa9.66□□□□□ -0.86
SMARCA4-208ENST00000585799 KRTAP10-9P60411 292 aa9.66□□□□□ -0.86
SMARCA4-208ENST00000585799 PDE6HQ13956 83 aa9.66□□□□□ -0.86
SMARCA4-208ENST00000585799 Q6ZWC4 215 aa9.66□□□□□ -0.86
SMARCA4-208ENST00000585799 GTSF1Q8WW33 167 aa9.66□□□□□ -0.86
SMARCA4-208ENST00000585799 MAP1LC3CQ9BXW4 147 aa9.66□□□□□ -0.86
SMARCA4-208ENST00000585799 H3BVH4 76 aa9.66□□□□□ -0.86
SMARCA4-208ENST00000585799 PHLDA3Q9Y5J5 127 aa9.66□□□□□ -0.86
SMARCA4-208ENST00000585799 IGLC2P0DOY2 106 aa9.66□□□□□ -0.86
SMARCA4-208ENST00000585799 ID1P41134 155 aa9.66□□□□□ -0.86
SMARCA4-208ENST00000585799 DYNLRB2Q8TF09 96 aa9.66□□□□□ -0.86
SMARCA4-208ENST00000585799 CCDC140Q96MF4 163 aa9.66□□□□□ -0.86
SMARCA4-208ENST00000585799 YAE1D1Q9NRH1 226 aa9.66□□□□□ -0.86
SMARCA4-208ENST00000585799 D6R8Y8 96 aa9.65□□□□□ -0.86
SMARCA4-208ENST00000585799 EGR2P11161 476 aaPredicted RBP9.65□□□□□ -0.86
SMARCA4-208ENST00000585799 UNQ9165/PRO28630Q6UXU0 137 aa9.65□□□□□ -0.86
SMARCA4-208ENST00000585799 ZNF843Q8N446 348 aa9.65□□□□□ -0.86
SMARCA4-208ENST00000585799 DUX3Q96PT4 197 aa9.65□□□□□ -0.86
SMARCA4-208ENST00000585799 C3orf79P0CE67 100 aa9.65□□□□□ -0.86
SMARCA4-208ENST00000585799 BTF3P20290 206 aaKnown RBP9.65□□□□□ -0.87
SMARCA4-208ENST00000585799 Q8N6K4 173 aa9.65□□□□□ -0.87
SMARCA4-208ENST00000585799 KLHDC1Q8N7A1 406 aa9.65□□□□□ -0.87
SMARCA4-208ENST00000585799 BUB3O43684 328 aa9.64□□□□□ -0.87
SMARCA4-208ENST00000585799 LINC00614P0C842 121 aa9.64□□□□□ -0.87
SMARCA4-208ENST00000585799 RPS20P60866 119 aaKnown RBP9.64□□□□□ -0.87
SMARCA4-208ENST00000585799 OR10J3Q5JRS4 329 aa9.64□□□□□ -0.87
SMARCA4-208ENST00000585799 PSMG4Q5JS54 123 aa9.64□□□□□ -0.87
SMARCA4-208ENST00000585799 C10orf99Q6UWK7 81 aa9.64□□□□□ -0.87
SMARCA4-208ENST00000585799 ZNF492Q9P255 531 aa9.64□□□□□ -0.87
SMARCA4-208ENST00000585799 FAM223BA6NKX1 122 aa9.64□□□□□ -0.87
SMARCA4-208ENST00000585799 HOXA3O43365 443 aaPredicted RBP9.64□□□□□ -0.87
SMARCA4-208ENST00000585799 SNAI2O43623 268 aa9.64□□□□□ -0.87
SMARCA4-208ENST00000585799 EBI3Q14213 229 aa9.64□□□□□ -0.87
SMARCA4-208ENST00000585799 FAM74A4Q5TZK3 123 aa9.64□□□□□ -0.87
SMARCA4-208ENST00000585799 ATP5L2Q7Z4Y8 100 aa9.64□□□□□ -0.87
SMARCA4-208ENST00000585799 FAM223AQ8IWN6 122 aa9.64□□□□□ -0.87
SMARCA4-208ENST00000585799 DMRTA1Q5VZB9 504 aa9.64□□□□□ -0.87
SMARCA4-208ENST00000585799 EBLN2Q6P2I7 272 aa9.64□□□□□ -0.87
SMARCA4-208ENST00000585799 TMEM191AQ9H0A3 160 aa9.64□□□□□ -0.87
SMARCA4-208ENST00000585799 PEF1Q9UBV8 284 aaKnown RBP9.64□□□□□ -0.87
SMARCA4-208ENST00000585799 CHD6Q8TD26 2715 aa9.63□□□□□ -0.87
SMARCA4-208ENST00000585799 AGPAT4-IT1Q9H0P7 198 aa9.63□□□□□ -0.87
SMARCA4-208ENST00000585799 KLF12Q9Y4X4 402 aa9.63□□□□□ -0.87
SMARCA4-208ENST00000585799 IGHV3OR16-12A0A075B7B8 117 aa9.63□□□□□ -0.87
SMARCA4-208ENST00000585799 NDUFS6O75380 124 aaKnown RBP9.63□□□□□ -0.87
SMARCA4-208ENST00000585799 DEFB136Q30KP8 78 aa9.63□□□□□ -0.87
SMARCA4-208ENST00000585799 GDF5OSQ5U4N7 250 aa9.63□□□□□ -0.87
SMARCA4-208ENST00000585799 ALKBH7Q9BT30 221 aaPredicted RBP9.63□□□□□ -0.87
SMARCA4-208ENST00000585799 ORMDL3Q8N138 153 aa9.63□□□□□ -0.87
SMARCA4-208ENST00000585799 USMG5Q96IX5 58 aa9.63□□□□□ -0.87
SMARCA4-208ENST00000585799 TMEM208Q9BTX3 173 aa9.63□□□□□ -0.87
SMARCA4-208ENST00000585799 A0A1B0GV90 55 aa9.62□□□□□ -0.87
SMARCA4-208ENST00000585799 FAM181BA6NEQ2 426 aa9.62□□□□□ -0.87
SMARCA4-208ENST00000585799 A8MWP6 167 aa9.62□□□□□ -0.87
SMARCA4-208ENST00000585799 Q0VG73 95 aa9.62□□□□□ -0.87
SMARCA4-208ENST00000585799 TMEM70Q9BUB7 260 aa9.62□□□□□ -0.87
SMARCA4-208ENST00000585799 LOC102724200A0A096LPH7 203 aaPredicted RBP9.62□□□□□ -0.87
SMARCA4-208ENST00000585799 M0R143 59 aa9.62□□□□□ -0.87
SMARCA4-208ENST00000585799 RPLP1P05386 114 aaKnown RBP9.62□□□□□ -0.87
SMARCA4-208ENST00000585799 CTAG1AP78358 180 aa9.62□□□□□ -0.87
SMARCA4-208ENST00000585799 TDRG1Q3Y452 100 aa9.62□□□□□ -0.87
SMARCA4-208ENST00000585799 SPOCK3Q9BQ16 436 aa9.62□□□□□ -0.87
SMARCA4-208ENST00000585799 PRDM13Q9H4Q3 707 aa9.62□□□□□ -0.87
SMARCA4-208ENST00000585799 MSRB1Q9NZV6 116 aa9.62□□□□□ -0.87
SMARCA4-208ENST00000585799 HSPB8Q9UJY1 196 aa9.62□□□□□ -0.87
SMARCA4-208ENST00000585799 PAX2Q02962 417 aa9.62□□□□□ -0.87
SMARCA4-208ENST00000585799 AJUBAQ96IF1 538 aa9.62□□□□□ -0.87
SMARCA4-208ENST00000585799 MYCNOSP40205 109 aa9.61□□□□□ -0.87
SMARCA4-208ENST00000585799 FOXE3Q13461 319 aa9.61□□□□□ -0.87
SMARCA4-208ENST00000585799 COA6Q5JTJ3 125 aaKnown RBP9.61□□□□□ -0.87
SMARCA4-208ENST00000585799 REC114Q7Z4M0 266 aa9.61□□□□□ -0.87
SMARCA4-208ENST00000585799 OR10AG1Q8NH19 301 aa9.61□□□□□ -0.87
SMARCA4-208ENST00000585799 POLR3KQ9Y2Y1 108 aaPredicted RBP9.61□□□□□ -0.87
SMARCA4-208ENST00000585799 FLNBO75369 2602 aaKnown RBP9.61□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms