RNA–Protein interactions for RNA: ENST00000584063.5

CDK5RAP3-231, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 1 (best)

Gene CDK5RAP3, Length 2,759 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-231ENST00000584063 NPFFR1Q9GZQ6 430 aa9.21□□□□□ -0.94
CDK5RAP3-231ENST00000584063 TMEM167BQ9NRX6 74 aa9.21□□□□□ -0.94
CDK5RAP3-231ENST00000584063 TRAV8-1A0A0A6YYK1 113 aa9.2□□□□□ -0.94
CDK5RAP3-231ENST00000584063 Q0VG73 95 aa9.2□□□□□ -0.94
CDK5RAP3-231ENST00000584063 MEIG1Q5JSS6 88 aa9.2□□□□□ -0.94
CDK5RAP3-231ENST00000584063 APRG1Q8IVJ8 170 aa9.2□□□□□ -0.94
CDK5RAP3-231ENST00000584063 NUP35Q8NFH5 326 aa9.2□□□□□ -0.94
CDK5RAP3-231ENST00000584063 C18orf32Q8TCD1 76 aa9.2□□□□□ -0.94
CDK5RAP3-231ENST00000584063 CDIP1Q9H305 208 aa9.2□□□□□ -0.94
CDK5RAP3-231ENST00000584063 RPUSD1Q9UJJ7 312 aaKnown RBP9.2□□□□□ -0.94
CDK5RAP3-231ENST00000584063 TRAV8-6A0A0B4J262 113 aa9.2□□□□□ -0.94
CDK5RAP3-231ENST00000584063 HIGD1CA8MV81 97 aa9.2□□□□□ -0.94
CDK5RAP3-231ENST00000584063 RTL8BQ17RB0 113 aa9.2□□□□□ -0.94
CDK5RAP3-231ENST00000584063 LINC01559Q495D7 138 aa9.2□□□□□ -0.94
CDK5RAP3-231ENST00000584063 LINC00322Q6ZN03 302 aaPredicted RBP9.2□□□□□ -0.94
CDK5RAP3-231ENST00000584063 FAM167A-AS1Q96KT0 104 aa9.2□□□□□ -0.94
CDK5RAP3-231ENST00000584063 TXNDC17Q9BRA2 123 aa9.2□□□□□ -0.94
CDK5RAP3-231ENST00000584063 PAXXQ9BUH6 204 aa9.2□□□□□ -0.94
CDK5RAP3-231ENST00000584063 SPANXA1Q9NS26 97 aa9.2□□□□□ -0.94
CDK5RAP3-231ENST00000584063 CYSLTR1Q9Y271 337 aa9.2□□□□□ -0.94
CDK5RAP3-231ENST00000584063 IGLC7A0M8Q6 106 aa9.19□□□□□ -0.94
CDK5RAP3-231ENST00000584063 CRYGDP07320 174 aa9.19□□□□□ -0.94
CDK5RAP3-231ENST00000584063 UFSP1Q6NVU6 142 aa9.19□□□□□ -0.94
CDK5RAP3-231ENST00000584063 EBLN2Q6P2I7 272 aa9.19□□□□□ -0.94
CDK5RAP3-231ENST00000584063 SLC25A48Q6ZT89 311 aaKnown RBP9.19□□□□□ -0.94
CDK5RAP3-231ENST00000584063 CSN3P07498 182 aa9.19□□□□□ -0.94
CDK5RAP3-231ENST00000584063 CNTFRP26992 372 aa9.19□□□□□ -0.94
CDK5RAP3-231ENST00000584063 TMEM200BQ69YZ2 307 aa9.19□□□□□ -0.94
CDK5RAP3-231ENST00000584063 LINC00305Q7Z4B0 112 aa9.19□□□□□ -0.94
CDK5RAP3-231ENST00000584063 IGF2BP2-AS1Q96M15 143 aa9.19□□□□□ -0.94
CDK5RAP3-231ENST00000584063 CTSZQ9UBR2 303 aa9.19□□□□□ -0.94
CDK5RAP3-231ENST00000584063 S4R3C0 116 aa9.19□□□□□ -0.94
CDK5RAP3-231ENST00000584063 USP9YO00507 2555 aaPredicted RBP9.19□□□□□ -0.94
CDK5RAP3-231ENST00000584063 PGPA6NDG6 321 aa9.18□□□□□ -0.94
CDK5RAP3-231ENST00000584063 SLC25A5P05141 298 aaKnown RBP9.18□□□□□ -0.94
CDK5RAP3-231ENST00000584063 TAS2R45P59539 299 aa9.18□□□□□ -0.94
CDK5RAP3-231ENST00000584063 C10orf113Q5VZT2 155 aa9.18□□□□□ -0.94
CDK5RAP3-231ENST00000584063 PGLYRP4Q96LB8 373 aa9.18□□□□□ -0.94
CDK5RAP3-231ENST00000584063 CELSR1Q9NYQ6 3014 aa9.18□□□□□ -0.94
CDK5RAP3-231ENST00000584063 ABCA12Q86UK0 2595 aa9.18□□□□□ -0.94
CDK5RAP3-231ENST00000584063 ATP5LO75964 103 aa9.18□□□□□ -0.94
CDK5RAP3-231ENST00000584063 IGLC2P0DOY2 106 aa9.18□□□□□ -0.94
CDK5RAP3-231ENST00000584063 IGLC3P0DOY3 106 aa9.18□□□□□ -0.94
CDK5RAP3-231ENST00000584063 KIR2DS2P43631 304 aa9.18□□□□□ -0.94
CDK5RAP3-231ENST00000584063 OR8B2Q96RD0 313 aa9.18□□□□□ -0.94
CDK5RAP3-231ENST00000584063 OSTCQ9NRP0 149 aa9.18□□□□□ -0.94
CDK5RAP3-231ENST00000584063 MRPS16Q9Y3D3 137 aaKnown RBP9.18□□□□□ -0.94
CDK5RAP3-231ENST00000584063 PRB1P04280 392 aa9.18□□□□□ -0.94
CDK5RAP3-231ENST00000584063 CELSR2Q9HCU4 2923 aa9.17□□□□□ -0.94
CDK5RAP3-231ENST00000584063 SMIM27A0A1W2PRY6 76 aa9.17□□□□□ -0.94
CDK5RAP3-231ENST00000584063 CTRLP40313 264 aa9.17□□□□□ -0.94
CDK5RAP3-231ENST00000584063 OR4B1Q8NGF8 309 aa9.17□□□□□ -0.94
CDK5RAP3-231ENST00000584063 DOPEY1Q5JWR5 2465 aa9.17□□□□□ -0.94
CDK5RAP3-231ENST00000584063 MUC21A0A0G2JKD1 596 aa9.17□□□□□ -0.94
CDK5RAP3-231ENST00000584063 MUC21A0A140T8X8 626 aa9.17□□□□□ -0.94
CDK5RAP3-231ENST00000584063 IZUMO1RA6ND01 250 aa9.17□□□□□ -0.94
CDK5RAP3-231ENST00000584063 H0YJW9 148 aa9.17□□□□□ -0.94
CDK5RAP3-231ENST00000584063 PEX7O00628 323 aa9.17□□□□□ -0.94
CDK5RAP3-231ENST00000584063 UBE2G1P62253 170 aa9.17□□□□□ -0.94
CDK5RAP3-231ENST00000584063 ERHP84090 104 aaKnown RBP9.17□□□□□ -0.94
CDK5RAP3-231ENST00000584063 MUC21Q5SSG8 566 aa9.17□□□□□ -0.94
CDK5RAP3-231ENST00000584063 ZNF329Q86UD4 541 aa9.17□□□□□ -0.94
CDK5RAP3-231ENST00000584063 EXOC3-AS1Q8N2X6 119 aa9.17□□□□□ -0.94
CDK5RAP3-231ENST00000584063 CHD6Q8TD26 2715 aa9.16□□□□□ -0.94
CDK5RAP3-231ENST00000584063 TRBV9A0A0B4J1U6 114 aa9.16□□□□□ -0.94
CDK5RAP3-231ENST00000584063 hDV102S1A0JD36 115 aa9.16□□□□□ -0.94
CDK5RAP3-231ENST00000584063 HLA-DQA1P01909 254 aa9.16□□□□□ -0.94
CDK5RAP3-231ENST00000584063 LINC01561Q8N1V8 128 aa9.16□□□□□ -0.94
CDK5RAP3-231ENST00000584063 CARD19Q96LW7 228 aa9.16□□□□□ -0.94
CDK5RAP3-231ENST00000584063 PTPN13Q12923 2485 aa9.16□□□□□ -0.94
CDK5RAP3-231ENST00000584063 TMEM178BH3BS89 294 aa9.16□□□□□ -0.94
CDK5RAP3-231ENST00000584063 MT-ATP8P03928 68 aa9.16□□□□□ -0.94
CDK5RAP3-231ENST00000584063 ELANEP08246 267 aa9.16□□□□□ -0.94
CDK5RAP3-231ENST00000584063 IGLL1P15814 213 aa9.16□□□□□ -0.94
CDK5RAP3-231ENST00000584063 TSPOP30536 169 aa9.16□□□□□ -0.94
CDK5RAP3-231ENST00000584063 FOXI2Q6ZQN5 318 aa9.16□□□□□ -0.94
CDK5RAP3-231ENST00000584063 C3orf56Q8N813 242 aa9.16□□□□□ -0.94
CDK5RAP3-231ENST00000584063 ZNRF2Q8NHG8 242 aa9.16□□□□□ -0.94
CDK5RAP3-231ENST00000584063 C20orf173Q96LM9 149 aa9.16□□□□□ -0.94
CDK5RAP3-231ENST00000584063 TNFRSF19Q9NS68 423 aa9.16□□□□□ -0.94
CDK5RAP3-231ENST00000584063 ARL2-SNX15V9GYD0 113 aa9.16□□□□□ -0.94
CDK5RAP3-231ENST00000584063 IGKV1D-37A0A075B6S9 117 aa9.15□□□□□ -0.94
CDK5RAP3-231ENST00000584063 hADV38S2A0JD32 116 aa9.15□□□□□ -0.94
CDK5RAP3-231ENST00000584063 APOA2P02652 100 aa9.15□□□□□ -0.94
CDK5RAP3-231ENST00000584063 FAM106CPP0CH98 169 aa9.15□□□□□ -0.94
CDK5RAP3-231ENST00000584063 EVI2AP22794 236 aa9.15□□□□□ -0.94
CDK5RAP3-231ENST00000584063 FAM106AQ4KMX7 169 aa9.15□□□□□ -0.94
CDK5RAP3-231ENST00000584063 C2orf83Q53S99 150 aa9.15□□□□□ -0.94
CDK5RAP3-231ENST00000584063 C2orf48Q96LS8 159 aa9.15□□□□□ -0.94
CDK5RAP3-231ENST00000584063 ZNF714Q96N38 554 aa9.15□□□□□ -0.94
CDK5RAP3-231ENST00000584063 TM2D2Q9BX73 214 aa9.15□□□□□ -0.94
CDK5RAP3-231ENST00000584063 NDUFA4L2Q9NRX3 87 aa9.15□□□□□ -0.94
CDK5RAP3-231ENST00000584063 SOX21Q9Y651 276 aaPredicted RBP9.15□□□□□ -0.94
CDK5RAP3-231ENST00000584063 FAM181BA6NEQ2 426 aa9.15□□□□□ -0.95
CDK5RAP3-231ENST00000584063 TEX36Q5VZQ5 186 aa9.15□□□□□ -0.95
CDK5RAP3-231ENST00000584063 CIARTQ8N365 385 aaPredicted RBP9.15□□□□□ -0.95
CDK5RAP3-231ENST00000584063 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP9.14□□□□□ -0.953e-7■■■□□ 15.6
CDK5RAP3-231ENST00000584063 MT-ND6P03923 174 aa9.14□□□□□ -0.95
CDK5RAP3-231ENST00000584063 FXYD7P58549 80 aa9.14□□□□□ -0.95
CDK5RAP3-231ENST00000584063 ZNF833PQ6ZTB9 187 aa9.14□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms