RNA–Protein interactions for RNA: ENST00000583294.1

SMARCE1-219, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 2

Gene SMARCE1, Length 476 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-219ENST00000583294 OR5H6Q8NGV6 325 aa0.66□□□□□ -2.3
SMARCE1-219ENST00000583294 DIRC1Q969H9 104 aa0.66□□□□□ -2.3
SMARCE1-219ENST00000583294 ANKRD31Q8N7Z5 1873 aa0.66□□□□□ -2.3
SMARCE1-219ENST00000583294 TRAPPC8Q9Y2L5 1435 aa0.65□□□□□ -2.3
SMARCE1-219ENST00000583294 C3orf85A0A1B0GTC6 90 aa0.65□□□□□ -2.31
SMARCE1-219ENST00000583294 PRH1P02810 166 aa0.65□□□□□ -2.31
SMARCE1-219ENST00000583294 PDE6GP18545 87 aa0.65□□□□□ -2.31
SMARCE1-219ENST00000583294 OR5AK2Q8NH90 309 aa0.65□□□□□ -2.31
SMARCE1-219ENST00000583294 CCL4L1Q8NHW4 92 aa0.65□□□□□ -2.31
SMARCE1-219ENST00000583294 ISOC1Q96CN7 298 aa0.65□□□□□ -2.31
SMARCE1-219ENST00000583294 CACNA1EQ15878 2313 aa0.65□□□□□ -2.31
SMARCE1-219ENST00000583294 NUP210Q8TEM1 1887 aaPredicted RBP0.65□□□□□ -2.31
SMARCE1-219ENST00000583294 A0A0J9YY99 117 aa0.64□□□□□ -2.31
SMARCE1-219ENST00000583294 Q6ZS92 163 aa0.64□□□□□ -2.31
SMARCE1-219ENST00000583294 STX12Q86Y82 276 aa0.64□□□□□ -2.31
SMARCE1-219ENST00000583294 CLEC2BQ92478 149 aa0.64□□□□□ -2.31
SMARCE1-219ENST00000583294 RMND5BQ96G75 393 aaPredicted RBP0.64□□□□□ -2.31
SMARCE1-219ENST00000583294 TRACP01848 142 aa0.63□□□□□ -2.31
SMARCE1-219ENST00000583294 S100A11P31949 105 aa0.63□□□□□ -2.31
SMARCE1-219ENST00000583294 PLAC4Q8WY50 150 aa0.63□□□□□ -2.31
SMARCE1-219ENST00000583294 PRELID3AQ96N28 172 aa0.63□□□□□ -2.31
SMARCE1-219ENST00000583294 ROCK1Q13464 1354 aa0.62□□□□□ -2.31
SMARCE1-219ENST00000583294 SDC2P34741 201 aa0.62□□□□□ -2.31
SMARCE1-219ENST00000583294 NDUFA6P56556 154 aa0.62□□□□□ -2.31
SMARCE1-219ENST00000583294 SPINK7P58062 85 aa0.62□□□□□ -2.31
SMARCE1-219ENST00000583294 LPAR5Q9H1C0 372 aa0.62□□□□□ -2.31
SMARCE1-219ENST00000583294 TANC2Q9HCD6 1990 aa0.62□□□□□ -2.31
SMARCE1-219ENST00000583294 BCL2P10415 239 aa0.61□□□□□ -2.31
SMARCE1-219ENST00000583294 CCL4P13236 92 aa0.61□□□□□ -2.31
SMARCE1-219ENST00000583294 TPT1P13693 172 aaKnown RBP0.61□□□□□ -2.31
SMARCE1-219ENST00000583294 TEX29Q8N6K0 151 aa0.61□□□□□ -2.31
SMARCE1-219ENST00000583294 GRPEL2Q8TAA5 225 aa0.61□□□□□ -2.31
SMARCE1-219ENST00000583294 SMR3AQ99954 134 aa0.61□□□□□ -2.31
SMARCE1-219ENST00000583294 PCBD2Q9H0N5 130 aa0.61□□□□□ -2.31
SMARCE1-219ENST00000583294 NAV2Q8IVL1 2488 aa0.61□□□□□ -2.31
SMARCE1-219ENST00000583294 FXYD6P3P58550 94 aa0.6□□□□□ -2.31
SMARCE1-219ENST00000583294 MAXP61244 160 aa0.6□□□□□ -2.31
SMARCE1-219ENST00000583294 TMEM78Q5T7P6 136 aa0.6□□□□□ -2.31
SMARCE1-219ENST00000583294 C5orf17Q8NAS9 161 aa0.6□□□□□ -2.31
SMARCE1-219ENST00000583294 AP1S3Q96PC3 154 aa0.6□□□□□ -2.31
SMARCE1-219ENST00000583294 CCDC32Q9BV29 185 aa0.6□□□□□ -2.31
SMARCE1-219ENST00000583294 FKBP11Q9NYL4 201 aa0.6□□□□□ -2.31
SMARCE1-219ENST00000583294 JPT1Q9UK76 154 aa0.6□□□□□ -2.31
SMARCE1-219ENST00000583294 LAMTOR2Q9Y2Q5 125 aa0.6□□□□□ -2.31
SMARCE1-219ENST00000583294 AHNAKQ09666 5890 aaKnown RBP0.6□□□□□ -2.31
SMARCE1-219ENST00000583294 LOC107984156A0A0G2JMH3 177 aa0.59□□□□□ -2.31
SMARCE1-219ENST00000583294 SULT1C4O75897 302 aa0.59□□□□□ -2.31
SMARCE1-219ENST00000583294 ARL17AQ8IVW1 177 aa0.59□□□□□ -2.31
SMARCE1-219ENST00000583294 C10orf111Q8N326 155 aa0.59□□□□□ -2.31
SMARCE1-219ENST00000583294 CIB3Q96Q77 187 aaPredicted RBP0.59□□□□□ -2.31
SMARCE1-219ENST00000583294 FAM103A1Q9BTL3 118 aaKnown RBP0.59□□□□□ -2.31
SMARCE1-219ENST00000583294 PLAC8Q9NZF1 115 aa0.59□□□□□ -2.31
SMARCE1-219ENST00000583294 LOC285556D6RIA3 1793 aa0.58□□□□□ -2.32
SMARCE1-219ENST00000583294 HRCT1Q6UXD1 115 aa0.58□□□□□ -2.32
SMARCE1-219ENST00000583294 LINC00305Q7Z4B0 112 aa0.58□□□□□ -2.32
SMARCE1-219ENST00000583294 ANK1P16157 1881 aa0.58□□□□□ -2.32
SMARCE1-219ENST00000583294 DLC1Q96QB1 1528 aa0.58□□□□□ -2.32
SMARCE1-219ENST00000583294 CTTNBP2Q8WZ74 1663 aa0.57□□□□□ -2.32
SMARCE1-219ENST00000583294 A0A1W2PRE2 83 aa0.57□□□□□ -2.32
SMARCE1-219ENST00000583294 PHGR1C9JFL3 82 aa0.57□□□□□ -2.32
SMARCE1-219ENST00000583294 PFDN1O60925 122 aa0.57□□□□□ -2.32
SMARCE1-219ENST00000583294 IGHV3-30P01768 117 aa0.57□□□□□ -2.32
SMARCE1-219ENST00000583294 IGHV3-30-5P0DP03 117 aa0.57□□□□□ -2.32
SMARCE1-219ENST00000583294 QRFPP83859 136 aa0.57□□□□□ -2.32
SMARCE1-219ENST00000583294 BCORL1Q5H9F3 1711 aa0.57□□□□□ -2.32
SMARCE1-219ENST00000583294 KIAA1549LQ6ZVL6 1849 aa0.57□□□□□ -2.32
SMARCE1-219ENST00000583294 NINQ8N4C6 2090 aa0.57□□□□□ -2.32
SMARCE1-219ENST00000583294 USP54Q70EL1 1684 aa0.56□□□□□ -2.32
SMARCE1-219ENST00000583294 TCOF1Q13428 1488 aaKnown RBP0.56□□□□□ -2.32
SMARCE1-219ENST00000583294 BBIP1A8MTZ0 92 aa0.56□□□□□ -2.32
SMARCE1-219ENST00000583294 SAA1P0DJI8 122 aaPredicted RBP0.56□□□□□ -2.32
SMARCE1-219ENST00000583294 RPS3P23396 243 aaKnown RBP eCLIP0.56□□□□□ -2.32
SMARCE1-219ENST00000583294 CAV3P56539 151 aa0.56□□□□□ -2.32
SMARCE1-219ENST00000583294 SNRPD3P62318 126 aaKnown RBP0.56□□□□□ -2.32
SMARCE1-219ENST00000583294 CSAG1Q6PB30 78 aa0.56□□□□□ -2.32
SMARCE1-219ENST00000583294 NABP2Q9BQ15 211 aa0.56□□□□□ -2.32
SMARCE1-219ENST00000583294 ATPIF1Q9UII2 106 aa0.56□□□□□ -2.32
SMARCE1-219ENST00000583294 DSPPQ9NZW4 1301 aa0.56□□□□□ -2.32
SMARCE1-219ENST00000583294 TRAV13-1A0A0B4J241 112 aa0.55□□□□□ -2.32
SMARCE1-219ENST00000583294 TRBV27A0A0K0K1C4 114 aa0.55□□□□□ -2.32
SMARCE1-219ENST00000583294 TMEM229BQ8NBD8 167 aa0.55□□□□□ -2.32
SMARCE1-219ENST00000583294 FGD6Q6ZV73 1430 aa0.55□□□□□ -2.32
SMARCE1-219ENST00000583294 KCPQ6ZWJ8 1503 aa0.54□□□□□ -2.32
SMARCE1-219ENST00000583294 ARL5CA6NH57 179 aa0.54□□□□□ -2.32
SMARCE1-219ENST00000583294 LY6G6CO95867 125 aa0.54□□□□□ -2.32
SMARCE1-219ENST00000583294 IZUMO2Q6UXV1 221 aa0.54□□□□□ -2.32
SMARCE1-219ENST00000583294 C3orf62Q6ZUJ4 267 aa0.54□□□□□ -2.32
SMARCE1-219ENST00000583294 TCTEX1D1Q8N7M0 179 aa0.54□□□□□ -2.32
SMARCE1-219ENST00000583294 LXNQ9BS40 222 aa0.54□□□□□ -2.32
SMARCE1-219ENST00000583294 TRAPPC2LQ9UL33 140 aa0.54□□□□□ -2.32
SMARCE1-219ENST00000583294 MED31Q9Y3C7 131 aa0.54□□□□□ -2.32
SMARCE1-219ENST00000583294 LOC107986453A0A1B0GWG9 222 aa0.53□□□□□ -2.32
SMARCE1-219ENST00000583294 A0A1W2PPB8 328 aa0.53□□□□□ -2.32
SMARCE1-219ENST00000583294 A0A1W2PRS3 328 aa0.53□□□□□ -2.32
SMARCE1-219ENST00000583294 A6NN06 94 aa0.53□□□□□ -2.32
SMARCE1-219ENST00000583294 KIR3DP1A8MWS1 328 aa0.53□□□□□ -2.32
SMARCE1-219ENST00000583294 E7EQ34 232 aa0.53□□□□□ -2.32
SMARCE1-219ENST00000583294 KRTAP2-3P0C7H8 128 aa0.53□□□□□ -2.32
SMARCE1-219ENST00000583294 XAF1Q6GPH4 301 aa0.53□□□□□ -2.32
SMARCE1-219ENST00000583294 THEM6Q8WUY1 208 aa0.53□□□□□ -2.32
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms