RNA–Protein interactions for RNA: ENST00000582730.6

SRSF1-205, Transcript of serine and arginine rich splicing factor 1, humanhuman

TSL 2 BASIC

Gene SRSF1, Length 3,117 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF1-205ENST00000582730 H0Y8G0 127 aa10.63□□□□□ -0.71
SRSF1-205ENST00000582730 ZNF207O43670 478 aaKnown RBP10.63□□□□□ -0.71
SRSF1-205ENST00000582730 HLA-DMBP28068 263 aa10.63□□□□□ -0.71
SRSF1-205ENST00000582730 LY6EQ16553 131 aa10.63□□□□□ -0.71
SRSF1-205ENST00000582730 CHCHD1Q96BP2 118 aaKnown RBP10.63□□□□□ -0.71
SRSF1-205ENST00000582730 CELSR1Q9NYQ6 3014 aa10.63□□□□□ -0.71
SRSF1-205ENST00000582730 ABCA2Q9BZC7 2435 aa10.63□□□□□ -0.71
SRSF1-205ENST00000582730 CD5LO43866 347 aa10.62□□□□□ -0.71
SRSF1-205ENST00000582730 Q8TAT8 98 aa10.62□□□□□ -0.71
SRSF1-205ENST00000582730 MYO18BQ8IUG5 2567 aa10.62□□□□□ -0.71
SRSF1-205ENST00000582730 ZNF138P52744 262 aa10.62□□□□□ -0.71
SRSF1-205ENST00000582730 PDE6HQ13956 83 aa10.62□□□□□ -0.71
SRSF1-205ENST00000582730 ZNF502Q8TBZ5 544 aa10.62□□□□□ -0.71
SRSF1-205ENST00000582730 C5orf56Q8N8D9 126 aa10.62□□□□□ -0.71
SRSF1-205ENST00000582730 PMCHL2Q9BQD1 86 aa10.62□□□□□ -0.71
SRSF1-205ENST00000582730 SOX21Q9Y651 276 aaPredicted RBP10.62□□□□□ -0.71
SRSF1-205ENST00000582730 IGHV1-69DA0A0B4J2H0 117 aa10.61□□□□□ -0.71
SRSF1-205ENST00000582730 K7ERU9 68 aa10.61□□□□□ -0.71
SRSF1-205ENST00000582730 IGHV1-69P01742 117 aa10.61□□□□□ -0.71
SRSF1-205ENST00000582730 FOXE3Q13461 319 aa10.61□□□□□ -0.71
SRSF1-205ENST00000582730 USP9XQ93008 2570 aaPredicted RBP10.61□□□□□ -0.71
SRSF1-205ENST00000582730 GFRA4Q9GZZ7 299 aa10.61□□□□□ -0.71
SRSF1-205ENST00000582730 ZFYVE26Q68DK2 2539 aa10.61□□□□□ -0.71
SRSF1-205ENST00000582730 IGHV4-30-2A0A087WSY4 118 aa10.61□□□□□ -0.71
SRSF1-205ENST00000582730 NPIPB6E9PJ23 425 aa10.61□□□□□ -0.71
SRSF1-205ENST00000582730 GOSR1O95249 250 aa10.61□□□□□ -0.71
SRSF1-205ENST00000582730 NRGNQ92686 78 aa10.61□□□□□ -0.71
SRSF1-205ENST00000582730 MAP1LC3CQ9BXW4 147 aa10.61□□□□□ -0.71
SRSF1-205ENST00000582730 ARMS2P0C7Q2 107 aa10.6□□□□□ -0.71
SRSF1-205ENST00000582730 IGHV4-38-2P0DP08 117 aa10.6□□□□□ -0.71
SRSF1-205ENST00000582730 CRIP1P50238 77 aa10.6□□□□□ -0.71
SRSF1-205ENST00000582730 HIST1H1AQ02539 215 aaPredicted RBP10.6□□□□□ -0.71
SRSF1-205ENST00000582730 PAX8Q06710 450 aa10.6□□□□□ -0.71
SRSF1-205ENST00000582730 MOB4Q9Y3A3 225 aa10.6□□□□□ -0.71
SRSF1-205ENST00000582730 TIMM8BQ9Y5J9 83 aaPredicted RBP10.6□□□□□ -0.71
SRSF1-205ENST00000582730 C10orf105Q8TEF2 133 aa10.6□□□□□ -0.71
SRSF1-205ENST00000582730 EEF1AKMT3Q96AZ1 226 aa10.6□□□□□ -0.71
SRSF1-205ENST00000582730 CCDC140Q96MF4 163 aa10.6□□□□□ -0.71
SRSF1-205ENST00000582730 PEF1Q9UBV8 284 aaKnown RBP10.6□□□□□ -0.71
SRSF1-205ENST00000582730 SMAD5-AS1Q9Y6J3 95 aa10.6□□□□□ -0.71
SRSF1-205ENST00000582730 DOPEY1Q5JWR5 2465 aa10.6□□□□□ -0.71
SRSF1-205ENST00000582730 SNAI2O43623 268 aa10.6□□□□□ -0.71
SRSF1-205ENST00000582730 PET117Q6UWS5 81 aa10.6□□□□□ -0.71
SRSF1-205ENST00000582730 MEGF9Q9H1U4 602 aa10.6□□□□□ -0.71
SRSF1-205ENST00000582730 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP10.59□□□□□ -0.718e-11■■■■□ 20.4
SRSF1-205ENST00000582730 VPS13CQ709C8 3753 aa10.59□□□□□ -0.71
SRSF1-205ENST00000582730 A0A1B0GUT8 65 aa10.59□□□□□ -0.71
SRSF1-205ENST00000582730 SAP30O75446 220 aa10.59□□□□□ -0.71
SRSF1-205ENST00000582730 TRBV6-1A0A0K0K1D8 114 aa10.59□□□□□ -0.71
SRSF1-205ENST00000582730 MS4A6AQ9H2W1 248 aa10.59□□□□□ -0.71
SRSF1-205ENST00000582730 TRAV41A0A0B4J266 112 aa10.58□□□□□ -0.72
SRSF1-205ENST00000582730 C7orf71A4D174 169 aa10.58□□□□□ -0.72
SRSF1-205ENST00000582730 CSN3P07498 182 aa10.58□□□□□ -0.72
SRSF1-205ENST00000582730 OR5AL1P0C617 328 aa10.58□□□□□ -0.72
SRSF1-205ENST00000582730 RNF182Q8N6D2 247 aa10.58□□□□□ -0.72
SRSF1-205ENST00000582730 VGLL1Q99990 258 aa10.58□□□□□ -0.72
SRSF1-205ENST00000582730 FAM231BA6NCW3 169 aa10.58□□□□□ -0.72
SRSF1-205ENST00000582730 PRB1P04280 392 aa10.58□□□□□ -0.72
SRSF1-205ENST00000582730 ATP5G2Q06055 141 aa10.58□□□□□ -0.72
SRSF1-205ENST00000582730 C2orf91Q6ZV80 131 aa10.58□□□□□ -0.72
SRSF1-205ENST00000582730 SELENOKQ9Y6D0 94 aa10.58□□□□□ -0.72
SRSF1-205ENST00000582730 FAM208BQ5VWN6 2430 aa10.58□□□□□ -0.72
SRSF1-205ENST00000582730 UTP20O75691 2785 aaKnown RBP10.58□□□□□ -0.72
SRSF1-205ENST00000582730 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP10.58□□□□□ -0.72
SRSF1-205ENST00000582730 TMEM189A5PLL7 270 aa10.58□□□□□ -0.72
SRSF1-205ENST00000582730 SH2D1AO60880 128 aa10.58□□□□□ -0.72
SRSF1-205ENST00000582730 TRGV3P03979 118 aa10.58□□□□□ -0.72
SRSF1-205ENST00000582730 RIPPLY3P57055 190 aa10.58□□□□□ -0.72
SRSF1-205ENST00000582730 RIGQ13278 110 aa10.58□□□□□ -0.72
SRSF1-205ENST00000582730 CRYBG3Q68DQ2 2970 aa10.58□□□□□ -0.72
SRSF1-205ENST00000582730 ZFAND3Q9H8U3 227 aa10.58□□□□□ -0.72
SRSF1-205ENST00000582730 H3BUX3 64 aa10.57□□□□□ -0.72
SRSF1-205ENST00000582730 APOHP02749 345 aaPredicted RBP10.57□□□□□ -0.72
SRSF1-205ENST00000582730 NDFIP1Q9BT67 221 aa10.57□□□□□ -0.72
SRSF1-205ENST00000582730 SERTM2A0A1B0GWG4 89 aa10.57□□□□□ -0.72
SRSF1-205ENST00000582730 GAGE10A6NGK3 116 aa10.57□□□□□ -0.72
SRSF1-205ENST00000582730 HSPB8Q9UJY1 196 aa10.57□□□□□ -0.72
SRSF1-205ENST00000582730 BUB3O43684 328 aa10.56□□□□□ -0.72
SRSF1-205ENST00000582730 COX8AP10176 69 aa10.56□□□□□ -0.72
SRSF1-205ENST00000582730 ERCC8Q13216 396 aa10.56□□□□□ -0.72
SRSF1-205ENST00000582730 LINC01545Q5VT33 79 aa10.56□□□□□ -0.72
SRSF1-205ENST00000582730 PRR25Q96S07 402 aa10.56□□□□□ -0.72
SRSF1-205ENST00000582730 METTL26Q96S19 204 aa10.56□□□□□ -0.72
SRSF1-205ENST00000582730 ZFHX3Q15911 3703 aa10.56□□□□□ -0.72
SRSF1-205ENST00000582730 TMEM238C9JI98 176 aa10.56□□□□□ -0.72
SRSF1-205ENST00000582730 HAX1O00165 279 aa10.56□□□□□ -0.72
SRSF1-205ENST00000582730 PIFOQ8TCI5 191 aa10.56□□□□□ -0.72
SRSF1-205ENST00000582730 TMEM190Q8WZ59 177 aa10.56□□□□□ -0.72
SRSF1-205ENST00000582730 TRBV7-1A0A0A6YYK4 115 aa10.55□□□□□ -0.72
SRSF1-205ENST00000582730 TMEM8BA6NDV4 472 aa10.55□□□□□ -0.72
SRSF1-205ENST00000582730 NDUFS8O00217 210 aa10.55□□□□□ -0.72
SRSF1-205ENST00000582730 MSMBP08118 114 aa10.55□□□□□ -0.72
SRSF1-205ENST00000582730 TMEM97Q5BJF2 176 aa10.55□□□□□ -0.72
SRSF1-205ENST00000582730 HIF1ANQ9NWT6 349 aa10.55□□□□□ -0.72
SRSF1-205ENST00000582730 PRAC2D3DTV9 90 aa10.55□□□□□ -0.72
SRSF1-205ENST00000582730 IGHV3-11P01762 117 aa10.55□□□□□ -0.72
SRSF1-205ENST00000582730 C16orf54Q6UWD8 224 aa10.55□□□□□ -0.72
SRSF1-205ENST00000582730 LYZL1Q6UWQ5 148 aa10.55□□□□□ -0.72
SRSF1-205ENST00000582730 FER1L6-AS1Q8NA97 138 aa10.55□□□□□ -0.72
SRSF1-205ENST00000582730 CSPG4Q6UVK1 2322 aa10.55□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms