RNA–Protein interactions for RNA: ENST00000582230.5

TOP3A-213, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 4

Gene TOP3A, Length 588 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-213ENST00000582230 ERCC8Q13216 396 aa14.6□□□□□ -0.07
TOP3A-213ENST00000582230 IGF2BP2-AS1Q96M15 143 aa14.6□□□□□ -0.07
TOP3A-213ENST00000582230 RARRES2Q99969 163 aa14.6□□□□□ -0.07
TOP3A-213ENST00000582230 VGLL1Q99990 258 aa14.6□□□□□ -0.07
TOP3A-213ENST00000582230 EPDR1Q9UM22 224 aa14.6□□□□□ -0.07
TOP3A-213ENST00000582230 AGRNO00468 2067 aa14.6□□□□□ -0.07
TOP3A-213ENST00000582230 A0A1B0GV50 99 aa14.59□□□□□ -0.07
TOP3A-213ENST00000582230 LEPP41159 167 aa14.59□□□□□ -0.07
TOP3A-213ENST00000582230 ZNF138P52744 262 aa14.59□□□□□ -0.07
TOP3A-213ENST00000582230 OR11H2Q8NH07 326 aa14.59□□□□□ -0.07
TOP3A-213ENST00000582230 RPH3ALQ9UNE2 315 aa14.59□□□□□ -0.07
TOP3A-213ENST00000582230 TRBV7-9A0A0J9YWB2 115 aa14.58□□□□□ -0.08
TOP3A-213ENST00000582230 K7EQM0 130 aa14.58□□□□□ -0.08
TOP3A-213ENST00000582230 INSP01308 110 aa14.58□□□□□ -0.08
TOP3A-213ENST00000582230 TCRAP04437 139 aa14.58□□□□□ -0.08
TOP3A-213ENST00000582230 GOLT1AQ6ZVE7 132 aa14.58□□□□□ -0.08
TOP3A-213ENST00000582230 ZNF492Q9P255 531 aa14.58□□□□□ -0.08
TOP3A-213ENST00000582230 GOLT1BQ9Y3E0 138 aa14.58□□□□□ -0.08
TOP3A-213ENST00000582230 CRXO43186 299 aaPredicted RBP14.57□□□□□ -0.08
TOP3A-213ENST00000582230 IFNA7P01567 189 aa14.57□□□□□ -0.08
TOP3A-213ENST00000582230 NMBP08949 121 aa14.57□□□□□ -0.08
TOP3A-213ENST00000582230 GNG5P63218 68 aa14.57□□□□□ -0.08
TOP3A-213ENST00000582230 BLOC1S1P78537 153 aa14.57□□□□□ -0.08
TOP3A-213ENST00000582230 CST9LP1Q5W188 147 aa14.57□□□□□ -0.08
TOP3A-213ENST00000582230 ZNF705AQ6ZN79 300 aaPredicted RBP14.57□□□□□ -0.08
TOP3A-213ENST00000582230 FAM19A4Q96LR4 140 aa14.57□□□□□ -0.08
TOP3A-213ENST00000582230 TCEAL7Q9BRU2 100 aa14.57□□□□□ -0.08
TOP3A-213ENST00000582230 LENEPQ9Y5L5 61 aa14.57□□□□□ -0.08
TOP3A-213ENST00000582230 TRAV12-2A0A075B6T6 113 aa14.56□□□□□ -0.08
TOP3A-213ENST00000582230 PAGE4O60829 102 aa14.56□□□□□ -0.08
TOP3A-213ENST00000582230 ATG101Q9BSB4 218 aa14.56□□□□□ -0.08
TOP3A-213ENST00000582230 MANBALQ9NQG1 85 aa14.56□□□□□ -0.08
TOP3A-213ENST00000582230 FBLL1A6NHQ2 334 aaKnown RBP14.55□□□□□ -0.08
TOP3A-213ENST00000582230 CRISP2P16562 243 aa14.55□□□□□ -0.08
TOP3A-213ENST00000582230 CCL20P78556 96 aa14.55□□□□□ -0.08
TOP3A-213ENST00000582230 C1orf158Q8N1D5 194 aa14.55□□□□□ -0.08
TOP3A-213ENST00000582230 CYB561D1Q8N8Q1 229 aa14.55□□□□□ -0.08
TOP3A-213ENST00000582230 HIST1H2BAQ96A08 127 aa14.55□□□□□ -0.08
TOP3A-213ENST00000582230 NEU1Q99519 415 aa14.55□□□□□ -0.08
TOP3A-213ENST00000582230 C20orf144Q9BQM9 153 aa14.55□□□□□ -0.08
TOP3A-213ENST00000582230 SMIM9A6NGZ8 99 aa14.54□□□□□ -0.08
TOP3A-213ENST00000582230 F6UZH7 168 aa14.54□□□□□ -0.08
TOP3A-213ENST00000582230 MIFP14174 115 aa14.54□□□□□ -0.08
TOP3A-213ENST00000582230 PMS2P11Q13670 270 aa14.54□□□□□ -0.08
TOP3A-213ENST00000582230 CCDC28AQ8IWP9 274 aa14.54□□□□□ -0.08
TOP3A-213ENST00000582230 TMEM256Q8N2U0 113 aa14.54□□□□□ -0.08
TOP3A-213ENST00000582230 TMEM208Q9BTX3 173 aa14.54□□□□□ -0.08
TOP3A-213ENST00000582230 GNG13Q9P2W3 67 aa14.54□□□□□ -0.08
TOP3A-213ENST00000582230 X6R8D5 127 aa14.54□□□□□ -0.08
TOP3A-213ENST00000582230 IGHV3OR16-12A0A075B7B8 117 aa14.53□□□□□ -0.08
TOP3A-213ENST00000582230 KLLNB2CW77 178 aa14.53□□□□□ -0.08
TOP3A-213ENST00000582230 TEX261Q6UWH6 196 aa14.53□□□□□ -0.08
TOP3A-213ENST00000582230 Q8TAT8 98 aa14.53□□□□□ -0.08
TOP3A-213ENST00000582230 TRAV8-1A0A0A6YYK1 113 aa14.52□□□□□ -0.09
TOP3A-213ENST00000582230 PEX7O00628 323 aa14.52□□□□□ -0.09
TOP3A-213ENST00000582230 GPX1P07203 203 aa14.52□□□□□ -0.09
TOP3A-213ENST00000582230 GFI1BQ5VTD9 330 aa14.52□□□□□ -0.09
TOP3A-213ENST00000582230 ZFAND2AQ8N6M9 145 aa14.52□□□□□ -0.09
TOP3A-213ENST00000582230 TMEM75Q8N9X5 138 aa14.52□□□□□ -0.09
TOP3A-213ENST00000582230 TXNDC17Q9BRA2 123 aa14.52□□□□□ -0.09
TOP3A-213ENST00000582230 J3KRW8 73 aa14.51□□□□□ -0.09
TOP3A-213ENST00000582230 IFNA1P01562 189 aa14.51□□□□□ -0.09
TOP3A-213ENST00000582230 ATP5G3P48201 142 aa14.51□□□□□ -0.09
TOP3A-213ENST00000582230 KIR3DS1Q14943 382 aa14.51□□□□□ -0.09
TOP3A-213ENST00000582230 LINC01587Q99440 93 aa14.51□□□□□ -0.09
TOP3A-213ENST00000582230 NDFIP1Q9BT67 221 aa14.51□□□□□ -0.09
TOP3A-213ENST00000582230 C7orf71A4D174 169 aa14.5□□□□□ -0.09
TOP3A-213ENST00000582230 C11orf94C9JXX5 98 aa14.5□□□□□ -0.09
TOP3A-213ENST00000582230 H7BYZ3 331 aa14.5□□□□□ -0.09
TOP3A-213ENST00000582230 TAGLN2P37802 199 aaKnown RBP14.5□□□□□ -0.09
TOP3A-213ENST00000582230 FLI1Q01543 452 aaPredicted RBP14.5□□□□□ -0.09
TOP3A-213ENST00000582230 Q8NAQ8 132 aa14.5□□□□□ -0.09
TOP3A-213ENST00000582230 ZNF680Q8NEM1 530 aa14.5□□□□□ -0.09
TOP3A-213ENST00000582230 LYPD6BQ8NI32 183 aa14.5□□□□□ -0.09
TOP3A-213ENST00000582230 NIPSNAP3BQ9BS92 247 aa14.5□□□□□ -0.09
TOP3A-213ENST00000582230 C11orf68Q9H3H3 251 aaKnown RBP14.5□□□□□ -0.09
TOP3A-213ENST00000582230 EDA2RQ9HAV5 297 aa14.5□□□□□ -0.09
TOP3A-213ENST00000582230 PSG8Q9UQ74 426 aa14.5□□□□□ -0.09
TOP3A-213ENST00000582230 TRAV12-3A0A0B4J271 114 aa14.49□□□□□ -0.09
TOP3A-213ENST00000582230 A0A0J9YWU9 116 aa14.49□□□□□ -0.09
TOP3A-213ENST00000582230 IGLV2-11P01706 119 aa14.49□□□□□ -0.09
TOP3A-213ENST00000582230 RBMY1A1P0DJD3 496 aaKnown RBP14.49□□□□□ -0.09
TOP3A-213ENST00000582230 RBMY1CP0DJD4 496 aa14.49□□□□□ -0.09
TOP3A-213ENST00000582230 RNASE4P34096 147 aaKnown RBP14.49□□□□□ -0.09
TOP3A-213ENST00000582230 TAS2R60P59551 318 aa14.49□□□□□ -0.09
TOP3A-213ENST00000582230 RBMY1FQ15415 496 aaKnown RBP14.49□□□□□ -0.09
TOP3A-213ENST00000582230 WWC2-AS2Q96NR7 200 aa14.49□□□□□ -0.09
TOP3A-213ENST00000582230 NBEAL2Q6ZNJ1 2754 aa14.49□□□□□ -0.09
TOP3A-213ENST00000582230 COL7A1Q02388 2944 aa14.48□□□□□ -0.09
TOP3A-213ENST00000582230 IGHV4-28A0A0C4DH34 117 aa14.48□□□□□ -0.09
TOP3A-213ENST00000582230 RRN3P1Q2M238 152 aa14.48□□□□□ -0.09
TOP3A-213ENST00000582230 SAPCD1Q5SSQ6 148 aa14.48□□□□□ -0.09
TOP3A-213ENST00000582230 SGK494Q96LW2 274 aa14.48□□□□□ -0.09
TOP3A-213ENST00000582230 TREM1Q9NP99 234 aa14.48□□□□□ -0.09
TOP3A-213ENST00000582230 TMEM189A5PLL7 270 aa14.47□□□□□ -0.09
TOP3A-213ENST00000582230 ZNF324O75467 553 aaPredicted RBP14.47□□□□□ -0.09
TOP3A-213ENST00000582230 BCL2P10415 239 aa14.47□□□□□ -0.09
TOP3A-213ENST00000582230 BTN1A1Q13410 526 aa14.47□□□□□ -0.09
TOP3A-213ENST00000582230 PRNTQ86SH4 94 aa14.47□□□□□ -0.09
TOP3A-213ENST00000582230 TVP23CQ96ET8 276 aa14.47□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 64.6 ms