RNA–Protein interactions for RNA: ENST00000578150.1

TTC39C-205, Transcript of tetratricopeptide repeat domain 39C, human

TSL 3

Gene TTC39C, Length 499 nt, Biotype processed transcript, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TTC39C-205	ENST00000578150	FAM19A4	Q96LR4	140 aa		13.51	□□□□□ -0.25
TTC39C-205	ENST00000578150	LINC00467	Q9BRT7	94 aa		13.51	□□□□□ -0.25
TTC39C-205	ENST00000578150	KCNIP2	Q9NS61	270 aa		13.51	□□□□□ -0.25
TTC39C-205	ENST00000578150	PRAF2	O60831	178 aa		13.5	□□□□□ -0.25
TTC39C-205	ENST00000578150	NMB	P08949	121 aa		13.5	□□□□□ -0.25
TTC39C-205	ENST00000578150	CYCS	P99999	105 aa	Known RBP	13.5	□□□□□ -0.25
TTC39C-205	ENST00000578150	GCSAML	Q5JQS6	135 aa		13.5	□□□□□ -0.25
TTC39C-205	ENST00000578150	C9orf47	Q6ZRZ4	202 aa		13.5	□□□□□ -0.25
TTC39C-205	ENST00000578150	C6orf223	Q8N319	242 aa		13.5	□□□□□ -0.25
TTC39C-205	ENST00000578150	THAP6	Q8TBB0	222 aa		13.5	□□□□□ -0.25
TTC39C-205	ENST00000578150	BLNK	Q8WV28	456 aa		13.5	□□□□□ -0.25
TTC39C-205	ENST00000578150	SLC25A2	Q9BXI2	301 aa		13.5	□□□□□ -0.25
TTC39C-205	ENST00000578150	PCLO	Q9Y6V0	5065 aa		13.5	□□□□□ -0.25
TTC39C-205	ENST00000578150	ZNF324	O75467	553 aa	Predicted RBP	13.49	□□□□□ -0.25
TTC39C-205	ENST00000578150	UPK1B	O75841	260 aa		13.49	□□□□□ -0.25
TTC39C-205	ENST00000578150	CRISP2	P16562	243 aa		13.49	□□□□□ -0.25
TTC39C-205	ENST00000578150	HOXA5	P20719	270 aa		13.49	□□□□□ -0.25
TTC39C-205	ENST00000578150	ERCC8	Q13216	396 aa		13.49	□□□□□ -0.25
TTC39C-205	ENST00000578150	ANXA2R	Q3ZCQ2	193 aa		13.49	□□□□□ -0.25
TTC39C-205	ENST00000578150	EXOC3-AS1	Q8N2X6	119 aa		13.49	□□□□□ -0.25
TTC39C-205	ENST00000578150	C18orf15	Q96N68	181 aa		13.49	□□□□□ -0.25
TTC39C-205	ENST00000578150	AGPAT4-IT1	Q9H0P7	198 aa		13.49	□□□□□ -0.25
TTC39C-205	ENST00000578150	SIX6	O95475	246 aa		13.48	□□□□□ -0.25
TTC39C-205	ENST00000578150	EIF4E3	Q8N5X7	224 aa	Known RBP	13.48	□□□□□ -0.25
TTC39C-205	ENST00000578150	FAM167A-AS1	Q96KT0	104 aa		13.48	□□□□□ -0.25
TTC39C-205	ENST00000578150	MRPL32	Q9BYC8	188 aa	Known RBP	13.48	□□□□□ -0.25
TTC39C-205	ENST00000578150		Q9H8V8	135 aa		13.48	□□□□□ -0.25
TTC39C-205	ENST00000578150	OR5AC2	Q9NZP5	309 aa		13.48	□□□□□ -0.25
TTC39C-205	ENST00000578150		A0A0J9YY99	117 aa		13.47	□□□□□ -0.25
TTC39C-205	ENST00000578150	NBEAP1	P0C6P0	100 aa		13.47	□□□□□ -0.25
TTC39C-205	ENST00000578150	ICAM4	Q14773	271 aa		13.47	□□□□□ -0.25
TTC39C-205	ENST00000578150	LRRC37A5P	Q49AS3	106 aa		13.47	□□□□□ -0.25
TTC39C-205	ENST00000578150	TMEM78	Q5T7P6	136 aa		13.47	□□□□□ -0.25
TTC39C-205	ENST00000578150		Q6ZTI0	123 aa		13.47	□□□□□ -0.25
TTC39C-205	ENST00000578150	MIR17HG	Q75NE6	70 aa		13.47	□□□□□ -0.25
TTC39C-205	ENST00000578150	C11orf72	Q8NBR9	251 aa		13.47	□□□□□ -0.25
TTC39C-205	ENST00000578150	UPK3B	Q9BT76	320 aa		13.47	□□□□□ -0.25
TTC39C-205	ENST00000578150	WDR61	Q9GZS3	305 aa	Known RBP	13.47	□□□□□ -0.25
TTC39C-205	ENST00000578150	OR51M1	Q9H341	326 aa		13.47	□□□□□ -0.25
TTC39C-205	ENST00000578150	C17orf112	F2Z3M2	114 aa		13.46	□□□□□ -0.25
TTC39C-205	ENST00000578150	GPX1	P07203	203 aa		13.46	□□□□□ -0.25
TTC39C-205	ENST00000578150	CD300C	Q08708	224 aa		13.46	□□□□□ -0.25
TTC39C-205	ENST00000578150	BTN1A1	Q13410	526 aa		13.46	□□□□□ -0.25
TTC39C-205	ENST00000578150	TTC32	Q5I0X7	151 aa		13.46	□□□□□ -0.25
TTC39C-205	ENST00000578150	TMPRSS5	Q9H3S3	457 aa		13.46	□□□□□ -0.25
TTC39C-205	ENST00000578150	GSN-AS1	Q9NRJ2	163 aa		13.46	□□□□□ -0.25
TTC39C-205	ENST00000578150	TRGV2	A0A075B6R0	118 aa		13.45	□□□□□ -0.26
TTC39C-205	ENST00000578150	TRBV7-9	A0A0J9YWB2	115 aa		13.45	□□□□□ -0.26
TTC39C-205	ENST00000578150	INMT-MINDY4	F8WBC2	141 aa		13.45	□□□□□ -0.26
TTC39C-205	ENST00000578150		H0YIZ8	118 aa		13.45	□□□□□ -0.26
TTC39C-205	ENST00000578150	RNASE4	P34096	147 aa	Known RBP	13.45	□□□□□ -0.26
TTC39C-205	ENST00000578150	TNP2	Q05952	138 aa		13.45	□□□□□ -0.26
TTC39C-205	ENST00000578150	IBA57	Q5T440	356 aa	Known RBP	13.45	□□□□□ -0.26
TTC39C-205	ENST00000578150	FAM122C	Q6P4D5	195 aa		13.45	□□□□□ -0.26
TTC39C-205	ENST00000578150	ZNF575	Q86XF7	245 aa		13.45	□□□□□ -0.26
TTC39C-205	ENST00000578150	PAXX	Q9BUH6	204 aa		13.45	□□□□□ -0.26
TTC39C-205	ENST00000578150	FUT9	Q9Y231	359 aa		13.45	□□□□□ -0.26
TTC39C-205	ENST00000578150	IGKV2-40	A0A087WW87	121 aa	Predicted RBP	13.44	□□□□□ -0.26
TTC39C-205	ENST00000578150	IGKV2D-40	P01614	121 aa	Predicted RBP	13.44	□□□□□ -0.26
TTC39C-205	ENST00000578150	TCL1A	P56279	114 aa		13.44	□□□□□ -0.26
TTC39C-205	ENST00000578150	ZFAND2A	Q8N6M9	145 aa		13.44	□□□□□ -0.26
TTC39C-205	ENST00000578150	FXYD5	Q96DB9	178 aa		13.44	□□□□□ -0.26
TTC39C-205	ENST00000578150	ZNF492	Q9P255	531 aa		13.44	□□□□□ -0.26
TTC39C-205	ENST00000578150	MUC4	Q99102	2169 aa		13.44	□□□□□ -0.26
TTC39C-205	ENST00000578150	TRGV1	A0A0A0MS02	117 aa		13.43	□□□□□ -0.26
TTC39C-205	ENST00000578150		A0A1W2PPQ1	181 aa		13.43	□□□□□ -0.26
TTC39C-205	ENST00000578150	PET100	P0DJ07	73 aa		13.43	□□□□□ -0.26
TTC39C-205	ENST00000578150	IFITM3	Q01628	133 aa		13.43	□□□□□ -0.26
TTC39C-205	ENST00000578150	ESRG	Q1W209	222 aa		13.43	□□□□□ -0.26
TTC39C-205	ENST00000578150	LYPD1	Q8N2G4	141 aa		13.43	□□□□□ -0.26
TTC39C-205	ENST00000578150	PPP1R1C	Q8WVI7	109 aa		13.43	□□□□□ -0.26
TTC39C-205	ENST00000578150	ATP5S	Q99766	215 aa		13.43	□□□□□ -0.26
TTC39C-205	ENST00000578150	VGLL1	Q99990	258 aa		13.43	□□□□□ -0.26
TTC39C-205	ENST00000578150	MARVELD1	Q9BSK0	173 aa		13.43	□□□□□ -0.26
TTC39C-205	ENST00000578150		Q9H3A6	140 aa		13.43	□□□□□ -0.26
TTC39C-205	ENST00000578150	MRPS16	Q9Y3D3	137 aa	Known RBP	13.43	□□□□□ -0.26
TTC39C-205	ENST00000578150	RGS13	O14921	159 aa		13.42	□□□□□ -0.26
TTC39C-205	ENST00000578150	SPINK4	O60575	86 aa		13.42	□□□□□ -0.26
TTC39C-205	ENST00000578150	BTF3	P20290	206 aa	Known RBP	13.42	□□□□□ -0.26
TTC39C-205	ENST00000578150	ZNF138	P52744	262 aa		13.42	□□□□□ -0.26
TTC39C-205	ENST00000578150	H2BFS	P57053	126 aa		13.42	□□□□□ -0.26
TTC39C-205	ENST00000578150	PTTG2	Q9NZH5	202 aa		13.42	□□□□□ -0.26
TTC39C-205	ENST00000578150	IGHV1OR15-1	A0A075B7D0	117 aa		13.41	□□□□□ -0.26
TTC39C-205	ENST00000578150	RBAKDN	A6NC62	111 aa		13.41	□□□□□ -0.26
TTC39C-205	ENST00000578150	OR7C2	O60412	319 aa		13.41	□□□□□ -0.26
TTC39C-205	ENST00000578150	OR10J4	P0C629	311 aa		13.41	□□□□□ -0.26
TTC39C-205	ENST00000578150	CSN1S1	P47710	185 aa		13.41	□□□□□ -0.26
TTC39C-205	ENST00000578150	VSIG2	Q96IQ7	327 aa		13.41	□□□□□ -0.26
TTC39C-205	ENST00000578150	KLF12	Q9Y4X4	402 aa		13.41	□□□□□ -0.26
TTC39C-205	ENST00000578150		A0A096LPF7	62 aa		13.4	□□□□□ -0.26
TTC39C-205	ENST00000578150	C16orf90	A8MZG2	172 aa		13.4	□□□□□ -0.26
TTC39C-205	ENST00000578150	PRR9	Q5T870	116 aa		13.4	□□□□□ -0.26
TTC39C-205	ENST00000578150	PHYHIPL	Q96FC7	376 aa		13.4	□□□□□ -0.26
TTC39C-205	ENST00000578150	ST6GAL2	Q96JF0	529 aa		13.4	□□□□□ -0.26
TTC39C-205	ENST00000578150	ARPC5L	Q9BPX5	153 aa		13.4	□□□□□ -0.26
TTC39C-205	ENST00000578150	HSPB11	Q9Y547	144 aa		13.4	□□□□□ -0.26
TTC39C-205	ENST00000578150		A6NHS1	94 aa		13.39	□□□□□ -0.27
TTC39C-205	ENST00000578150	SSNA1	O43805	119 aa		13.39	□□□□□ -0.27
TTC39C-205	ENST00000578150	MPC2	O95563	127 aa		13.39	□□□□□ -0.27
TTC39C-205	ENST00000578150	TAS2R45	P59539	299 aa		13.39	□□□□□ -0.27

Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms