RNA–Protein interactions for RNA: ENST00000574501.1

SMG6-215, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

Gene SMG6, Length 2,419 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-215ENST00000574501 ZNF575Q86XF7 245 aa11.27□□□□□ -0.61
SMG6-215ENST00000574501 CDIP1Q9H305 208 aa11.27□□□□□ -0.61
SMG6-215ENST00000574501 FBXL15Q9H469 300 aa11.27□□□□□ -0.61
SMG6-215ENST00000574501 ORM1P02763 201 aa11.26□□□□□ -0.61
SMG6-215ENST00000574501 CCL11P51671 97 aa11.26□□□□□ -0.61
SMG6-215ENST00000574501 FOXI1Q12951 378 aa11.26□□□□□ -0.61
SMG6-215ENST00000574501 PSMG4Q5JS54 123 aa11.26□□□□□ -0.61
SMG6-215ENST00000574501 PPP1R27Q86WC6 154 aa11.26□□□□□ -0.61
SMG6-215ENST00000574501 RNF125Q96EQ8 232 aa11.26□□□□□ -0.61
SMG6-215ENST00000574501 MALRD1Q5VYJ5 2156 aa11.26□□□□□ -0.61
SMG6-215ENST00000574501 SEM1Q6ZVN7 128 aa11.26□□□□□ -0.61
SMG6-215ENST00000574501 GLMPQ8WWB7 406 aa11.26□□□□□ -0.61
SMG6-215ENST00000574501 PRR25Q96S07 402 aa11.26□□□□□ -0.61
SMG6-215ENST00000574501 NXT2Q9NPJ8 142 aaKnown RBP11.26□□□□□ -0.61
SMG6-215ENST00000574501 ATP5LO75964 103 aa11.25□□□□□ -0.61
SMG6-215ENST00000574501 CRYGBP07316 175 aa11.25□□□□□ -0.61
SMG6-215ENST00000574501 FHL3Q13643 280 aa11.25□□□□□ -0.61
SMG6-215ENST00000574501 NFE4Q86UQ8 179 aa11.25□□□□□ -0.61
SMG6-215ENST00000574501 LINC00311Q8N616 119 aa11.25□□□□□ -0.61
SMG6-215ENST00000574501 ZNF48Q96MX3 618 aaPredicted RBP11.25□□□□□ -0.61
SMG6-215ENST00000574501 DMXL1Q9Y485 3027 aa11.25□□□□□ -0.61
SMG6-215ENST00000574501 IGLC6P0CF74 106 aa11.25□□□□□ -0.61
SMG6-215ENST00000574501 GATA3P23771 443 aa11.25□□□□□ -0.61
SMG6-215ENST00000574501 LINC01546A6NGU7 62 aa11.24□□□□□ -0.61
SMG6-215ENST00000574501 SMCPP49901 116 aaPredicted RBP11.24□□□□□ -0.61
SMG6-215ENST00000574501 PRSS33Q8NF86 280 aa11.24□□□□□ -0.61
SMG6-215ENST00000574501 ZNF418Q8TF45 676 aaPredicted RBP11.24□□□□□ -0.61
SMG6-215ENST00000574501 CCL17Q92583 94 aa11.24□□□□□ -0.61
SMG6-215ENST00000574501 CYSLTR1Q9Y271 337 aa11.24□□□□□ -0.61
SMG6-215ENST00000574501 K7EIM0 57 aa11.24□□□□□ -0.61
SMG6-215ENST00000574501 CEACAM4O75871 244 aa11.24□□□□□ -0.61
SMG6-215ENST00000574501 THBDP07204 575 aa11.24□□□□□ -0.61
SMG6-215ENST00000574501 PLGLAQ15195 96 aa11.24□□□□□ -0.61
SMG6-215ENST00000574501 TAL2Q16559 108 aa11.24□□□□□ -0.61
SMG6-215ENST00000574501 MORN3Q6PF18 240 aaPredicted RBP11.24□□□□□ -0.61
SMG6-215ENST00000574501 C1QTNF4Q9BXJ3 329 aa11.24□□□□□ -0.61
SMG6-215ENST00000574501 EP300Q09472 2414 aaPredicted RBP11.23□□□□□ -0.61
SMG6-215ENST00000574501 TRBV7-3A0A075B6L6 115 aa11.23□□□□□ -0.61
SMG6-215ENST00000574501 HLA-DMBP28068 263 aa11.23□□□□□ -0.61
SMG6-215ENST00000574501 FDCSPQ8NFU4 85 aa11.23□□□□□ -0.61
SMG6-215ENST00000574501 PTH2Q96A98 100 aa11.23□□□□□ -0.61
SMG6-215ENST00000574501 RPEQ96AT9 228 aa11.23□□□□□ -0.61
SMG6-215ENST00000574501 PGPEP1Q9NXJ5 209 aa11.23□□□□□ -0.61
SMG6-215ENST00000574501 NCBP2LA6PVI3 153 aaKnown RBP11.23□□□□□ -0.61
SMG6-215ENST00000574501 NDUFB3O43676 98 aa11.23□□□□□ -0.61
SMG6-215ENST00000574501 EFNA4P52798 201 aa11.23□□□□□ -0.61
SMG6-215ENST00000574501 MYOZ3Q8TDC0 251 aa11.23□□□□□ -0.61
SMG6-215ENST00000574501 PKDREJQ9NTG1 2253 aa11.22□□□□□ -0.61
SMG6-215ENST00000574501 HOXA3O43365 443 aaPredicted RBP11.22□□□□□ -0.61
SMG6-215ENST00000574501 CNIH1O95406 144 aa11.22□□□□□ -0.61
SMG6-215ENST00000574501 IGHV1-8P0DP01 117 aa11.22□□□□□ -0.61
SMG6-215ENST00000574501 HLA-DRB4P13762 266 aa11.22□□□□□ -0.61
SMG6-215ENST00000574501 XGP55808 180 aa11.22□□□□□ -0.61
SMG6-215ENST00000574501 DTX2Q86UW9 622 aa11.22□□□□□ -0.61
SMG6-215ENST00000574501 CTSZQ9UBR2 303 aa11.22□□□□□ -0.61
SMG6-215ENST00000574501 HLA-DRB4X5D2U9 266 aa11.22□□□□□ -0.61
SMG6-215ENST00000574501 MUC6Q6W4X9 2439 aa11.22□□□□□ -0.61
SMG6-215ENST00000574501 TRAV26-2A0A0B4J265 109 aa11.21□□□□□ -0.61
SMG6-215ENST00000574501 LINC01548A6NM66 108 aa11.21□□□□□ -0.61
SMG6-215ENST00000574501 SRSF6Q13247 344 aaKnown RBP11.21□□□□□ -0.61
SMG6-215ENST00000574501 RNF183Q96D59 192 aa11.21□□□□□ -0.61
SMG6-215ENST00000574501 LOXP28300 417 aaPredicted RBP11.21□□□□□ -0.61
SMG6-215ENST00000574501 PSMB2P49721 201 aa11.21□□□□□ -0.61
SMG6-215ENST00000574501 KLRD1Q13241 179 aa11.21□□□□□ -0.61
SMG6-215ENST00000574501 CFAP126Q5VTH2 177 aa11.21□□□□□ -0.61
SMG6-215ENST00000574501 Q8N8P6 123 aa11.21□□□□□ -0.61
SMG6-215ENST00000574501 IGLV2-18A0A075B6J9 118 aa11.2□□□□□ -0.62
SMG6-215ENST00000574501 TRGV3P03979 118 aa11.2□□□□□ -0.62
SMG6-215ENST00000574501 DLX6P56179 175 aa11.2□□□□□ -0.62
SMG6-215ENST00000574501 FAM27E3Q08E93 113 aa11.2□□□□□ -0.62
SMG6-215ENST00000574501 Q6ZUT4 128 aa11.2□□□□□ -0.62
SMG6-215ENST00000574501 TPRP12270 2363 aaKnown RBP11.2□□□□□ -0.62
SMG6-215ENST00000574501 RIF1Q5UIP0 2472 aaKnown RBP11.2□□□□□ -0.62
SMG6-215ENST00000574501 A0A087WX48 190 aa11.2□□□□□ -0.62
SMG6-215ENST00000574501 IGHV1-3A0A0C4DH29 117 aa11.2□□□□□ -0.62
SMG6-215ENST00000574501 LOC107984156A0A0G2JMH3 177 aa11.2□□□□□ -0.62
SMG6-215ENST00000574501 PDE6HQ13956 83 aa11.2□□□□□ -0.62
SMG6-215ENST00000574501 ZFP2Q6ZN57 461 aa11.2□□□□□ -0.62
SMG6-215ENST00000574501 ARL17AQ8IVW1 177 aa11.2□□□□□ -0.62
SMG6-215ENST00000574501 C8orf31Q8N9H6 132 aa11.2□□□□□ -0.62
SMG6-215ENST00000574501 SVEP1Q4LDE5 3571 aa11.19□□□□□ -0.62
SMG6-215ENST00000574501 ERCC8Q13216 396 aa11.19□□□□□ -0.62
SMG6-215ENST00000574501 MYMXA0A1B0GTQ4 84 aa11.19□□□□□ -0.62
SMG6-215ENST00000574501 LINC01549A6NIU2 74 aa11.19□□□□□ -0.62
SMG6-215ENST00000574501 CD40P25942 277 aa11.19□□□□□ -0.62
SMG6-215ENST00000574501 LAGE3Q14657 143 aa11.19□□□□□ -0.62
SMG6-215ENST00000574501 DLX4Q92988 240 aaPredicted RBP11.19□□□□□ -0.62
SMG6-215ENST00000574501 SS18L2Q9UHA2 77 aa11.19□□□□□ -0.62
SMG6-215ENST00000574501 TMEM178BH3BS89 294 aa11.18□□□□□ -0.62
SMG6-215ENST00000574501 TMEM155Q4W5P6 130 aa11.18□□□□□ -0.62
SMG6-215ENST00000574501 IGFBPL1Q8WX77 278 aa11.18□□□□□ -0.62
SMG6-215ENST00000574501 KLK15Q9H2R5 256 aa11.18□□□□□ -0.62
SMG6-215ENST00000574501 IGHV3OR16-8A0A075B7F1 116 aa11.18□□□□□ -0.62
SMG6-215ENST00000574501 C17orf100A8MU93 164 aa11.18□□□□□ -0.62
SMG6-215ENST00000574501 IGHV3-23P01764 117 aa11.18□□□□□ -0.62
SMG6-215ENST00000574501 COX8CQ7Z4L0 72 aa11.18□□□□□ -0.62
SMG6-215ENST00000574501 OR11H12B2RN74 326 aa11.17□□□□□ -0.62
SMG6-215ENST00000574501 TSPAN13O95857 204 aa11.17□□□□□ -0.62
SMG6-215ENST00000574501 PLNP26678 52 aa11.17□□□□□ -0.62
SMG6-215ENST00000574501 GFRALQ6UXV0 394 aa11.17□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 62.2 ms