RNA–Protein interactions for RNA: ENST00000573126.1

RPAIN-212, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 2,728 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-212ENST00000573126 MRPL51Q4U2R6 128 aaKnown RBP8.69□□□□□ -1.02
RPAIN-212ENST00000573126 LINC01545Q5VT33 79 aa8.69□□□□□ -1.02
RPAIN-212ENST00000573126 SLC25A34Q6PIV7 304 aa8.69□□□□□ -1.02
RPAIN-212ENST00000573126 PIP4P2Q8N4L2 257 aa8.69□□□□□ -1.02
RPAIN-212ENST00000573126 FER1L6-AS1Q8NA97 138 aa8.69□□□□□ -1.02
RPAIN-212ENST00000573126 FAM110DQ8TAY7 271 aaPredicted RBP8.69□□□□□ -1.02
RPAIN-212ENST00000573126 MSRB1Q9NZV6 116 aa8.69□□□□□ -1.02
RPAIN-212ENST00000573126 IGHV3OR16-10A0A075B7F0 116 aa8.68□□□□□ -1.02
RPAIN-212ENST00000573126 BUB3O43684 328 aa8.68□□□□□ -1.02
RPAIN-212ENST00000573126 CCDC140Q96MF4 163 aa8.68□□□□□ -1.02
RPAIN-212ENST00000573126 ZFAND3Q9H8U3 227 aa8.68□□□□□ -1.02
RPAIN-212ENST00000573126 SPG11Q96JI7 2443 aa8.68□□□□□ -1.02
RPAIN-212ENST00000573126 NUDT3O95989 172 aa8.68□□□□□ -1.02
RPAIN-212ENST00000573126 EFNA4P52798 201 aa8.68□□□□□ -1.02
RPAIN-212ENST00000573126 ZNF575Q86XF7 245 aa8.68□□□□□ -1.02
RPAIN-212ENST00000573126 TMEM219Q86XT9 240 aa8.68□□□□□ -1.02
RPAIN-212ENST00000573126 SCRT2Q9NQ03 307 aa8.68□□□□□ -1.02
RPAIN-212ENST00000573126 SNAI2O43623 268 aa8.67□□□□□ -1.02
RPAIN-212ENST00000573126 PPIFP30405 207 aaKnown RBP8.67□□□□□ -1.02
RPAIN-212ENST00000573126 CKS2P33552 79 aa8.67□□□□□ -1.02
RPAIN-212ENST00000573126 BMI1P35226 326 aa8.67□□□□□ -1.02
RPAIN-212ENST00000573126 ERASQ7Z444 233 aa8.67□□□□□ -1.02
RPAIN-212ENST00000573126 COX8CQ7Z4L0 72 aa8.67□□□□□ -1.02
RPAIN-212ENST00000573126 LINC00527Q9UJ94 153 aa8.67□□□□□ -1.02
RPAIN-212ENST00000573126 NPYP01303 97 aa8.67□□□□□ -1.02
RPAIN-212ENST00000573126 TCTAP57738 103 aa8.67□□□□□ -1.02
RPAIN-212ENST00000573126 LMO4P61968 165 aa8.67□□□□□ -1.02
RPAIN-212ENST00000573126 IL17RELQ6ZVW7 336 aa8.67□□□□□ -1.02
RPAIN-212ENST00000573126 COX11Q9Y6N1 276 aa8.67□□□□□ -1.02
RPAIN-212ENST00000573126 CLPSL1A2RUU4 121 aa8.67□□□□□ -1.02
RPAIN-212ENST00000573126 IGLC6P0CF74 106 aa8.67□□□□□ -1.02
RPAIN-212ENST00000573126 UQCRFS1P47985 274 aa8.67□□□□□ -1.02
RPAIN-212ENST00000573126 U3KQK5 164 aa8.67□□□□□ -1.02
RPAIN-212ENST00000573126 CENPVL3A0A0U1RRI6 287 aa8.66□□□□□ -1.02
RPAIN-212ENST00000573126 GAS8-AS1O95177 125 aa8.66□□□□□ -1.02
RPAIN-212ENST00000573126 GOSR1O95249 250 aa8.66□□□□□ -1.02
RPAIN-212ENST00000573126 PRSS57Q6UWY2 283 aa8.66□□□□□ -1.02
RPAIN-212ENST00000573126 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa8.66□□□□□ -1.02
RPAIN-212ENST00000573126 A0A087X0K7 114 aa8.66□□□□□ -1.02
RPAIN-212ENST00000573126 C19orf84I3L1E1 186 aa8.66□□□□□ -1.02
RPAIN-212ENST00000573126 NPFFO15130 113 aa8.66□□□□□ -1.02
RPAIN-212ENST00000573126 CCL25O15444 150 aa8.66□□□□□ -1.02
RPAIN-212ENST00000573126 PTTG1IPP53801 180 aa8.66□□□□□ -1.02
RPAIN-212ENST00000573126 FOXE3Q13461 319 aa8.66□□□□□ -1.02
RPAIN-212ENST00000573126 WFDC3Q8IUB2 231 aa8.66□□□□□ -1.02
RPAIN-212ENST00000573126 ZNF738Q8NE65 137 aa8.66□□□□□ -1.02
RPAIN-212ENST00000573126 ORAOV1Q8WV07 137 aa8.66□□□□□ -1.02
RPAIN-212ENST00000573126 FABP5P3A8MUU1 101 aa8.65□□□□□ -1.02
RPAIN-212ENST00000573126 ARL6IP6Q8N6S5 226 aa8.65□□□□□ -1.02
RPAIN-212ENST00000573126 FBLL1A6NHQ2 334 aaKnown RBP8.65□□□□□ -1.03
RPAIN-212ENST00000573126 RPS20P60866 119 aaKnown RBP8.65□□□□□ -1.03
RPAIN-212ENST00000573126 S100A7P31151 101 aa8.64□□□□□ -1.03
RPAIN-212ENST00000573126 CACNG7P62955 275 aa8.64□□□□□ -1.03
RPAIN-212ENST00000573126 BVES-AS1Q5T3Y7 98 aa8.64□□□□□ -1.03
RPAIN-212ENST00000573126 MS4A6AQ9H2W1 248 aa8.64□□□□□ -1.03
RPAIN-212ENST00000573126 HBDP02042 147 aa8.64□□□□□ -1.03
RPAIN-212ENST00000573126 BRD3OSQ6XYD6 125 aa8.64□□□□□ -1.03
RPAIN-212ENST00000573126 C5orf56Q8N8D9 126 aa8.64□□□□□ -1.03
RPAIN-212ENST00000573126 AGPAT4-IT1Q9H0P7 198 aa8.64□□□□□ -1.03
RPAIN-212ENST00000573126 EVI2AP22794 236 aa8.63□□□□□ -1.03
RPAIN-212ENST00000573126 RAB9AP51151 201 aa8.63□□□□□ -1.03
RPAIN-212ENST00000573126 Q6ZQT7 251 aa8.63□□□□□ -1.03
RPAIN-212ENST00000573126 ITLN2Q8WWU7 325 aaPredicted RBP8.63□□□□□ -1.03
RPAIN-212ENST00000573126 EEF1AKMT3Q96AZ1 226 aa8.63□□□□□ -1.03
RPAIN-212ENST00000573126 RNF185Q96GF1 192 aa8.63□□□□□ -1.03
RPAIN-212ENST00000573126 METTL26Q96S19 204 aa8.63□□□□□ -1.03
RPAIN-212ENST00000573126 C11orf21Q9P2W6 132 aa8.63□□□□□ -1.03
RPAIN-212ENST00000573126 PAX8Q06710 450 aa8.63□□□□□ -1.03
RPAIN-212ENST00000573126 ANKRD39Q53RE8 183 aa8.63□□□□□ -1.03
RPAIN-212ENST00000573126 C18orf15Q96N68 181 aa8.63□□□□□ -1.03
RPAIN-212ENST00000573126 PSMG3-AS1Q96PY0 264 aa8.63□□□□□ -1.03
RPAIN-212ENST00000573126 ABCA2Q9BZC7 2435 aa8.63□□□□□ -1.03
RPAIN-212ENST00000573126 CSMD2Q7Z408 3487 aa8.62□□□□□ -1.03
RPAIN-212ENST00000573126 TRAV8-2A0A0B4J237 113 aa8.62□□□□□ -1.03
RPAIN-212ENST00000573126 IGKV3D-20A0A0C4DH25 116 aa8.62□□□□□ -1.03
RPAIN-212ENST00000573126 COX8AP10176 69 aa8.62□□□□□ -1.03
RPAIN-212ENST00000573126 GATA1P15976 413 aaPredicted RBP8.62□□□□□ -1.03
RPAIN-212ENST00000573126 C8orf86Q6ZUL3 223 aa8.62□□□□□ -1.03
RPAIN-212ENST00000573126 SLC50A1Q9BRV3 221 aa8.62□□□□□ -1.03
RPAIN-212ENST00000573126 CELSR2Q9HCU4 2923 aa8.62□□□□□ -1.03
RPAIN-212ENST00000573126 UBE2V1Q13404 147 aa8.62□□□□□ -1.03
RPAIN-212ENST00000573126 LINC01559Q495D7 138 aa8.62□□□□□ -1.03
RPAIN-212ENST00000573126 TRBV7-1A0A0A6YYK4 115 aa8.61□□□□□ -1.03
RPAIN-212ENST00000573126 IGHV4-39P01824 125 aa8.61□□□□□ -1.03
RPAIN-212ENST00000573126 GNLYP22749 145 aa8.61□□□□□ -1.03
RPAIN-212ENST00000573126 TMEM78Q5T7P6 136 aa8.61□□□□□ -1.03
RPAIN-212ENST00000573126 C12orf54Q6X4T0 127 aa8.61□□□□□ -1.03
RPAIN-212ENST00000573126 C2orf91Q6ZV80 131 aa8.61□□□□□ -1.03
RPAIN-212ENST00000573126 IFI27L1Q96BM0 104 aa8.61□□□□□ -1.03
RPAIN-212ENST00000573126 CNFNQ9BYD5 112 aa8.61□□□□□ -1.03
RPAIN-212ENST00000573126 TRAV40A0A0B4J280 105 aa8.61□□□□□ -1.03
RPAIN-212ENST00000573126 TAX1BP3O14907 124 aa8.61□□□□□ -1.03
RPAIN-212ENST00000573126 HIST1H1AQ02539 215 aaPredicted RBP8.61□□□□□ -1.03
RPAIN-212ENST00000573126 ATP5G2Q06055 141 aa8.61□□□□□ -1.03
RPAIN-212ENST00000573126 VAMP3Q15836 100 aa8.61□□□□□ -1.03
RPAIN-212ENST00000573126 PKD1L2Q7Z442 2459 aa8.61□□□□□ -1.03
RPAIN-212ENST00000573126 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP8.61□□□□□ -1.031e-8■■■□□ 16.6
RPAIN-212ENST00000573126 TRAV41A0A0B4J266 112 aa8.6□□□□□ -1.03
RPAIN-212ENST00000573126 RBAKDNA6NC62 111 aa8.6□□□□□ -1.03
RPAIN-212ENST00000573126 J3KRW8 73 aa8.6□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 109.6 ms