RNA–Protein interactions for RNA: ENST00000571947.5

TRAPPC1-204, Transcript of trafficking protein particle complex 1, humanhuman

TSL 3

Gene TRAPPC1, Length 306 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC1-204ENST00000571947 EDN2P20800 178 aa4.65□□□□□ -1.67
TRAPPC1-204ENST00000571947 HOXD3P31249 432 aaPredicted RBP4.65□□□□□ -1.67
TRAPPC1-204ENST00000571947 CRIP1P50238 77 aa4.65□□□□□ -1.67
TRAPPC1-204ENST00000571947 NDUFA6P56556 154 aa4.65□□□□□ -1.67
TRAPPC1-204ENST00000571947 SNRPEP62304 92 aaKnown RBP4.65□□□□□ -1.67
TRAPPC1-204ENST00000571947 FABP9Q0Z7S8 132 aa4.65□□□□□ -1.67
TRAPPC1-204ENST00000571947 ERCC8Q13216 396 aa4.65□□□□□ -1.67
TRAPPC1-204ENST00000571947 KLF5Q13887 457 aaPredicted RBP4.65□□□□□ -1.67
TRAPPC1-204ENST00000571947 SAMD13Q5VXD3 122 aa4.65□□□□□ -1.67
TRAPPC1-204ENST00000571947 WDR73Q6P4I2 378 aa4.65□□□□□ -1.67
TRAPPC1-204ENST00000571947 RASL11AQ6T310 242 aa4.65□□□□□ -1.67
TRAPPC1-204ENST00000571947 C9orf47Q6ZRZ4 202 aa4.65□□□□□ -1.67
TRAPPC1-204ENST00000571947 C18orf65Q6ZTR6 163 aa4.65□□□□□ -1.67
TRAPPC1-204ENST00000571947 TCF24Q7RTU0 167 aa4.65□□□□□ -1.67
TRAPPC1-204ENST00000571947 NUP35Q8NFH5 326 aa4.65□□□□□ -1.67
TRAPPC1-204ENST00000571947 SVIPQ8NHG7 77 aa4.65□□□□□ -1.67
TRAPPC1-204ENST00000571947 C4orf3Q8WVX3 66 aa4.65□□□□□ -1.67
TRAPPC1-204ENST00000571947 DPF1Q92782 380 aa4.65□□□□□ -1.67
TRAPPC1-204ENST00000571947 C20orf173Q96LM9 149 aa4.65□□□□□ -1.67
TRAPPC1-204ENST00000571947 JMJD8Q96S16 334 aa4.65□□□□□ -1.67
TRAPPC1-204ENST00000571947 NEU1Q99519 415 aa4.65□□□□□ -1.67
TRAPPC1-204ENST00000571947 ASCL2Q99929 193 aa4.65□□□□□ -1.67
TRAPPC1-204ENST00000571947 NDFIP1Q9BT67 221 aa4.65□□□□□ -1.67
TRAPPC1-204ENST00000571947 GNB1LQ9BYB4 327 aa4.65□□□□□ -1.67
TRAPPC1-204ENST00000571947 GFRA4Q9GZZ7 299 aa4.65□□□□□ -1.67
TRAPPC1-204ENST00000571947 AGPAT4-IT1Q9H0P7 198 aa4.65□□□□□ -1.67
TRAPPC1-204ENST00000571947 SAV1Q9H4B6 383 aaPredicted RBP4.65□□□□□ -1.67
TRAPPC1-204ENST00000571947 PPP1R14DQ9NXH3 145 aa4.65□□□□□ -1.67
TRAPPC1-204ENST00000571947 ZFHX3Q15911 3703 aa4.65□□□□□ -1.67
TRAPPC1-204ENST00000571947 HIVEP2P31629 2446 aa4.65□□□□□ -1.67
TRAPPC1-204ENST00000571947 C2orf70A6NJV1 201 aa4.64□□□□□ -1.67
TRAPPC1-204ENST00000571947 SNURFLB1AK76 121 aa4.64□□□□□ -1.67
TRAPPC1-204ENST00000571947 LINC01619G3V211 115 aa4.64□□□□□ -1.67
TRAPPC1-204ENST00000571947 SPINK4O60575 86 aa4.64□□□□□ -1.67
TRAPPC1-204ENST00000571947 SH2D1AO60880 128 aa4.64□□□□□ -1.67
TRAPPC1-204ENST00000571947 NDUFA7O95182 113 aa4.64□□□□□ -1.67
TRAPPC1-204ENST00000571947 MT-ND6P03923 174 aa4.64□□□□□ -1.67
TRAPPC1-204ENST00000571947 FRMD6-AS1P0C7T7 363 aa4.64□□□□□ -1.67
TRAPPC1-204ENST00000571947 HOXA5P20719 270 aa4.64□□□□□ -1.67
TRAPPC1-204ENST00000571947 CBLN1P23435 193 aa4.64□□□□□ -1.67
TRAPPC1-204ENST00000571947 ZNF138P52744 262 aa4.64□□□□□ -1.67
TRAPPC1-204ENST00000571947 SLURP1P55000 103 aa4.64□□□□□ -1.67
TRAPPC1-204ENST00000571947 FOXA3P55318 350 aaPredicted RBP4.64□□□□□ -1.67
TRAPPC1-204ENST00000571947 SYNJ2BPP57105 145 aa4.64□□□□□ -1.67
TRAPPC1-204ENST00000571947 RPS20P60866 119 aaKnown RBP4.64□□□□□ -1.67
TRAPPC1-204ENST00000571947 RPL11P62913 178 aaKnown RBP4.64□□□□□ -1.67
TRAPPC1-204ENST00000571947 SRSF2Q01130 221 aaKnown RBP4.64□□□□□ -1.67
TRAPPC1-204ENST00000571947 SMUG1Q53HV7 270 aa4.64□□□□□ -1.67
TRAPPC1-204ENST00000571947 FAM162BQ5T6X4 162 aa4.64□□□□□ -1.67
TRAPPC1-204ENST00000571947 TMEM78Q5T7P6 136 aa4.64□□□□□ -1.67
TRAPPC1-204ENST00000571947 MRPL54Q6P161 138 aaKnown RBP4.64□□□□□ -1.67
TRAPPC1-204ENST00000571947 TMEM136Q6ZRR5 245 aa4.64□□□□□ -1.67
TRAPPC1-204ENST00000571947 RBPMS2Q6ZRY4 209 aaKnown RBP4.64□□□□□ -1.67
TRAPPC1-204ENST00000571947 ATP5L2Q7Z4Y8 100 aa4.64□□□□□ -1.67
TRAPPC1-204ENST00000571947 ZNF738Q8NE65 137 aa4.64□□□□□ -1.67
TRAPPC1-204ENST00000571947 KLHL30-AS1Q8NEE0 82 aa4.64□□□□□ -1.67
TRAPPC1-204ENST00000571947 OR2D3Q8NGH3 330 aa4.64□□□□□ -1.67
TRAPPC1-204ENST00000571947 OR1N2Q8NGR9 330 aa4.64□□□□□ -1.67
TRAPPC1-204ENST00000571947 Q8TAT8 98 aa4.64□□□□□ -1.67
TRAPPC1-204ENST00000571947 GTSF1Q8WW33 167 aa4.64□□□□□ -1.67
TRAPPC1-204ENST00000571947 LINC00477Q96M19 166 aa4.64□□□□□ -1.67
TRAPPC1-204ENST00000571947 GPR61Q9BZJ8 451 aa4.64□□□□□ -1.67
TRAPPC1-204ENST00000571947 MRPL18Q9H0U6 180 aaKnown RBP4.64□□□□□ -1.67
TRAPPC1-204ENST00000571947 LENEPQ9Y5L5 61 aa4.64□□□□□ -1.67
TRAPPC1-204ENST00000571947 CSMD1Q96PZ7 3565 aa4.64□□□□□ -1.67
TRAPPC1-204ENST00000571947 MTORP42345 2549 aa4.64□□□□□ -1.67
TRAPPC1-204ENST00000571947 A0A1B0GXF2 115 aa4.63□□□□□ -1.67
TRAPPC1-204ENST00000571947 TMEM189A5PLL7 270 aa4.63□□□□□ -1.67
TRAPPC1-204ENST00000571947 FABP5P3A8MUU1 101 aa4.63□□□□□ -1.67
TRAPPC1-204ENST00000571947 HIGD1CA8MV81 97 aa4.63□□□□□ -1.67
TRAPPC1-204ENST00000571947 K7EQG2 157 aa4.63□□□□□ -1.67
TRAPPC1-204ENST00000571947 M0QZ24 198 aa4.63□□□□□ -1.67
TRAPPC1-204ENST00000571947 HLA-DQA1P01909 254 aa4.63□□□□□ -1.67
TRAPPC1-204ENST00000571947 GZMBP10144 247 aa4.63□□□□□ -1.67
TRAPPC1-204ENST00000571947 ID1P41134 155 aa4.63□□□□□ -1.67
TRAPPC1-204ENST00000571947 ZNF80P51504 273 aaPredicted RBP4.63□□□□□ -1.67
TRAPPC1-204ENST00000571947 HIST1H1AQ02539 215 aaPredicted RBP4.63□□□□□ -1.67
TRAPPC1-204ENST00000571947 DEFB136Q30KP8 78 aa4.63□□□□□ -1.67
TRAPPC1-204ENST00000571947 KHDC1LQ5JSQ8 128 aa4.63□□□□□ -1.67
TRAPPC1-204ENST00000571947 COA6Q5JTJ3 125 aaKnown RBP4.63□□□□□ -1.67
TRAPPC1-204ENST00000571947 OR11H1Q8NG94 326 aa4.63□□□□□ -1.67
TRAPPC1-204ENST00000571947 OR10J6PQ8NGY7 276 aa4.63□□□□□ -1.67
TRAPPC1-204ENST00000571947 LINC01006Q8NI28 216 aa4.63□□□□□ -1.67
TRAPPC1-204ENST00000571947 DCANP1Q8TF63 244 aa4.63□□□□□ -1.67
TRAPPC1-204ENST00000571947 PGLYRP4Q96LB8 373 aa4.63□□□□□ -1.67
TRAPPC1-204ENST00000571947 PEMTQ9UBM1 199 aa4.63□□□□□ -1.67
TRAPPC1-204ENST00000571947 ZNF469Q96JG9 3925 aaPredicted RBP4.63□□□□□ -1.67
TRAPPC1-204ENST00000571947 IGKV3-7A0A075B6H7 116 aa4.62□□□□□ -1.67
TRAPPC1-204ENST00000571947 TRBV7-9A0A0J9YWB2 115 aa4.62□□□□□ -1.67
TRAPPC1-204ENST00000571947 XKRY2A2RUG3 117 aa4.62□□□□□ -1.67
TRAPPC1-204ENST00000571947 CD28P10747 220 aa4.62□□□□□ -1.67
TRAPPC1-204ENST00000571947 RAB4BP61018 213 aa4.62□□□□□ -1.67
TRAPPC1-204ENST00000571947 RIGQ13278 110 aa4.62□□□□□ -1.67
TRAPPC1-204ENST00000571947 GDF5OSQ5U4N7 250 aa4.62□□□□□ -1.67
TRAPPC1-204ENST00000571947 Q6AWC8 147 aa4.62□□□□□ -1.67
TRAPPC1-204ENST00000571947 ADAMTSL5Q6ZMM2 481 aa4.62□□□□□ -1.67
TRAPPC1-204ENST00000571947 GATD1Q8NB37 220 aa4.62□□□□□ -1.67
TRAPPC1-204ENST00000571947 OR8A1Q8NGG7 326 aa4.62□□□□□ -1.67
TRAPPC1-204ENST00000571947 FAM19A4Q96LR4 140 aa4.62□□□□□ -1.67
TRAPPC1-204ENST00000571947 MS4A6AQ9H2W1 248 aa4.62□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 160.2 ms