RNA–Protein interactions for RNA: ENST00000569794.1

CHD9-220, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 5

Gene CHD9, Length 485 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-220ENST00000569794 CHD8Q9HCK8 2581 aa2.77□□□□□ -1.97
CHD9-220ENST00000569794 SPTBN5Q9NRC6 3674 aaKnown RBP2.77□□□□□ -1.97
CHD9-220ENST00000569794 HFM1A2PYH4 1435 aa2.76□□□□□ -1.97
CHD9-220ENST00000569794 TRAV3A0A0B4J244 114 aa2.76□□□□□ -1.97
CHD9-220ENST00000569794 A0A0J9YX75 114 aa2.76□□□□□ -1.97
CHD9-220ENST00000569794 LYRM1O43325 122 aa2.76□□□□□ -1.97
CHD9-220ENST00000569794 HIST1H1BP16401 226 aaKnown RBP2.76□□□□□ -1.97
CHD9-220ENST00000569794 ZNF14P17017 642 aaPredicted RBP2.76□□□□□ -1.97
CHD9-220ENST00000569794 ZNF93P35789 620 aaPredicted RBP2.76□□□□□ -1.97
CHD9-220ENST00000569794 GNG4P50150 75 aa2.76□□□□□ -1.97
CHD9-220ENST00000569794 GNG2P59768 71 aa2.76□□□□□ -1.97
CHD9-220ENST00000569794 BLCAPP62952 87 aa2.76□□□□□ -1.97
CHD9-220ENST00000569794 TEN1Q86WV5 123 aa2.76□□□□□ -1.97
CHD9-220ENST00000569794 KCNRGQ8N5I3 272 aa2.76□□□□□ -1.97
CHD9-220ENST00000569794 DEFB123Q8N688 67 aa2.76□□□□□ -1.97
CHD9-220ENST00000569794 PP6455Q8WZ26 134 aa2.76□□□□□ -1.97
CHD9-220ENST00000569794 RETNLBQ9BQ08 111 aa2.76□□□□□ -1.97
CHD9-220ENST00000569794 HIGD2AQ9BW72 106 aa2.76□□□□□ -1.97
CHD9-220ENST00000569794 RERGLQ9H628 205 aa2.76□□□□□ -1.97
CHD9-220ENST00000569794 TRPM2O94759 1503 aa2.76□□□□□ -1.97
CHD9-220ENST00000569794 CLIP1P30622 1438 aa2.76□□□□□ -1.97
CHD9-220ENST00000569794 ARHGAP31Q2M1Z3 1444 aa2.76□□□□□ -1.97
CHD9-220ENST00000569794 RIC1Q4ADV7 1423 aa2.76□□□□□ -1.97
CHD9-220ENST00000569794 LAMC1P11047 1609 aa2.75□□□□□ -1.97
CHD9-220ENST00000569794 IGLV3-9A0A075B6K5 115 aa2.75□□□□□ -1.97
CHD9-220ENST00000569794 TRAV40A0A0B4J280 105 aa2.75□□□□□ -1.97
CHD9-220ENST00000569794 IGHV1-18A0A0C4DH31 117 aa2.75□□□□□ -1.97
CHD9-220ENST00000569794 A0A1B0GVG6 124 aa2.75□□□□□ -1.97
CHD9-220ENST00000569794 SPAARA0A1B0GVQ0 90 aa2.75□□□□□ -1.97
CHD9-220ENST00000569794 SHBGP04278 402 aa2.75□□□□□ -1.97
CHD9-220ENST00000569794 PYYP10082 97 aa2.75□□□□□ -1.97
CHD9-220ENST00000569794 FABP4P15090 132 aa2.75□□□□□ -1.97
CHD9-220ENST00000569794 FUSP35637 526 aaKnown RBP eCLIP2.75□□□□□ -1.97
CHD9-220ENST00000569794 PCBD1P61457 104 aa2.75□□□□□ -1.97
CHD9-220ENST00000569794 ESRGQ1W209 222 aa2.75□□□□□ -1.97
CHD9-220ENST00000569794 TEX261Q6UWH6 196 aa2.75□□□□□ -1.97
CHD9-220ENST00000569794 GTF2H5Q6ZYL4 71 aa2.75□□□□□ -1.97
CHD9-220ENST00000569794 C8orf59Q8N0T1 100 aaPredicted RBP2.75□□□□□ -1.97
CHD9-220ENST00000569794 LINC00311Q8N616 119 aa2.75□□□□□ -1.97
CHD9-220ENST00000569794 LINC00467Q9BRT7 94 aa2.75□□□□□ -1.97
CHD9-220ENST00000569794 PRO3102Q9H379 93 aa2.75□□□□□ -1.97
CHD9-220ENST00000569794 BOKQ9UMX3 212 aaPredicted RBP2.75□□□□□ -1.97
CHD9-220ENST00000569794 ZFP30Q9Y2G7 519 aa2.75□□□□□ -1.97
CHD9-220ENST00000569794 TPRKBQ9Y3C4 175 aa2.75□□□□□ -1.97
CHD9-220ENST00000569794 LY96Q9Y6Y9 160 aa2.75□□□□□ -1.97
CHD9-220ENST00000569794 HSPE1-MOB4S4R3N1 261 aa2.75□□□□□ -1.97
CHD9-220ENST00000569794 FYCO1Q9BQS8 1478 aa2.75□□□□□ -1.97
CHD9-220ENST00000569794 RRBP1Q9P2E9 1410 aaKnown RBP2.75□□□□□ -1.97
CHD9-220ENST00000569794 NUP214P35658 2090 aaPredicted RBP2.75□□□□□ -1.97
CHD9-220ENST00000569794 TMEM218A2RU14 115 aa2.74□□□□□ -1.97
CHD9-220ENST00000569794 PSCAO43653 123 aa2.74□□□□□ -1.97
CHD9-220ENST00000569794 MGST1P10620 155 aaKnown RBP2.74□□□□□ -1.97
CHD9-220ENST00000569794 SLC25A4P12235 298 aa2.74□□□□□ -1.97
CHD9-220ENST00000569794 SS18Q15532 418 aa2.74□□□□□ -1.97
CHD9-220ENST00000569794 Q6P435 159 aa2.74□□□□□ -1.97
CHD9-220ENST00000569794 Q6ZQT0 140 aa2.74□□□□□ -1.97
CHD9-220ENST00000569794 TAS2R4Q9NYW5 299 aa2.74□□□□□ -1.97
CHD9-220ENST00000569794 DNAJC15Q9Y5T4 150 aa2.74□□□□□ -1.97
CHD9-220ENST00000569794 COL6A3P12111 3177 aa2.74□□□□□ -1.97
CHD9-220ENST00000569794 MYO5CQ9NQX4 1742 aa2.73□□□□□ -1.97
CHD9-220ENST00000569794 MBD5Q9P267 1494 aa2.73□□□□□ -1.97
CHD9-220ENST00000569794 LOC107986453A0A1B0GWG9 222 aa2.73□□□□□ -1.97
CHD9-220ENST00000569794 RPL36A-HNRNPH2H7BZ11 118 aa2.73□□□□□ -1.97
CHD9-220ENST00000569794 M0R143 59 aa2.73□□□□□ -1.97
CHD9-220ENST00000569794 OR1I1O60431 355 aa2.73□□□□□ -1.97
CHD9-220ENST00000569794 RBP4P02753 201 aa2.73□□□□□ -1.97
CHD9-220ENST00000569794 PEBP1P30086 187 aaKnown RBP2.73□□□□□ -1.97
CHD9-220ENST00000569794 HINT1P49773 126 aaPredicted RBP2.73□□□□□ -1.97
CHD9-220ENST00000569794 NNATQ16517 81 aa2.73□□□□□ -1.97
CHD9-220ENST00000569794 KRTAP21-2Q3LI59 83 aa2.73□□□□□ -1.97
CHD9-220ENST00000569794 SNX29P2Q8IUI4 249 aa2.73□□□□□ -1.97
CHD9-220ENST00000569794 ATOH7Q8N100 152 aa2.73□□□□□ -1.97
CHD9-220ENST00000569794 C10orf111Q8N326 155 aa2.73□□□□□ -1.97
CHD9-220ENST00000569794 LINC00471Q8N535 108 aa2.73□□□□□ -1.97
CHD9-220ENST00000569794 Q8N9L7 120 aa2.73□□□□□ -1.97
CHD9-220ENST00000569794 OR2T35Q8NGX2 323 aa2.73□□□□□ -1.97
CHD9-220ENST00000569794 CLEC2BQ92478 149 aa2.73□□□□□ -1.97
CHD9-220ENST00000569794 KLK12Q9UKR0 248 aa2.73□□□□□ -1.97
CHD9-220ENST00000569794 R4GN34 69 aa2.73□□□□□ -1.97
CHD9-220ENST00000569794 ZNF106Q9H2Y7 1883 aaKnown RBP2.73□□□□□ -1.97
CHD9-220ENST00000569794 PIEZO1Q92508 2521 aa2.73□□□□□ -1.97
CHD9-220ENST00000569794 BAHCC1Q9P281 2608 aa2.72□□□□□ -1.97
CHD9-220ENST00000569794 SIPA1L1O43166 1804 aa2.72□□□□□ -1.97
CHD9-220ENST00000569794 MYH10P35580 1976 aa2.72□□□□□ -1.97
CHD9-220ENST00000569794 DOCK4Q8N1I0 1966 aa2.72□□□□□ -1.97
CHD9-220ENST00000569794 ARID1AO14497 2285 aa2.72□□□□□ -1.97
CHD9-220ENST00000569794 PIK3C2BO00750 1634 aa2.72□□□□□ -1.97
CHD9-220ENST00000569794 IGHV3-64A0A075B6Q5 118 aa2.72□□□□□ -1.97
CHD9-220ENST00000569794 COLCA2A8K830 154 aa2.72□□□□□ -1.97
CHD9-220ENST00000569794 CCDC179H3BU77 68 aa2.72□□□□□ -1.97
CHD9-220ENST00000569794 M0R233 179 aa2.72□□□□□ -1.97
CHD9-220ENST00000569794 KDM6AO15550 1401 aaPredicted RBP2.72□□□□□ -1.97
CHD9-220ENST00000569794 CPSF4O95639 269 aaKnown RBP2.72□□□□□ -1.97
CHD9-220ENST00000569794 PMP2P02689 132 aa2.72□□□□□ -1.97
CHD9-220ENST00000569794 SAA1P0DJI8 122 aaPredicted RBP2.72□□□□□ -1.97
CHD9-220ENST00000569794 TPPP2P59282 170 aa2.72□□□□□ -1.97
CHD9-220ENST00000569794 TMEM258P61165 79 aa2.72□□□□□ -1.97
CHD9-220ENST00000569794 CIRBPQ14011 172 aaKnown RBP2.72□□□□□ -1.97
CHD9-220ENST00000569794 Q8IYB0 196 aa2.72□□□□□ -1.97
CHD9-220ENST00000569794 ACBD7Q8N6N7 88 aa2.72□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms