RNA–Protein interactions for RNA: ENST00000568290.1

ATXN3-250, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 671 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-250ENST00000568290 CUL9Q8IWT3 2517 aa5.93□□□□□ -1.46
ATXN3-250ENST00000568290 TNRC18O15417 2968 aaPredicted RBP5.93□□□□□ -1.46
ATXN3-250ENST00000568290 SVILO95425 2214 aa5.93□□□□□ -1.46
ATXN3-250ENST00000568290 IGKV2-40A0A087WW87 121 aaPredicted RBP5.93□□□□□ -1.46
ATXN3-250ENST00000568290 TMSB15BA0A087X1C1 80 aa5.93□□□□□ -1.46
ATXN3-250ENST00000568290 C9orf118A6NHY6 69 aa5.93□□□□□ -1.46
ATXN3-250ENST00000568290 M0R381 172 aa5.93□□□□□ -1.46
ATXN3-250ENST00000568290 NDUFA4O00483 81 aa5.93□□□□□ -1.46
ATXN3-250ENST00000568290 TAX1BP3O14907 124 aa5.93□□□□□ -1.46
ATXN3-250ENST00000568290 NPFFO15130 113 aa5.93□□□□□ -1.46
ATXN3-250ENST00000568290 CCL25O15444 150 aa5.93□□□□□ -1.46
ATXN3-250ENST00000568290 TNFRSF6BO95407 300 aa5.93□□□□□ -1.46
ATXN3-250ENST00000568290 IGKV2D-40P01614 121 aaPredicted RBP5.93□□□□□ -1.46
ATXN3-250ENST00000568290 SMIM13P0DJ93 91 aa5.93□□□□□ -1.46
ATXN3-250ENST00000568290 S100A4P26447 101 aaKnown RBP5.93□□□□□ -1.46
ATXN3-250ENST00000568290 LEPP41159 167 aa5.93□□□□□ -1.46
ATXN3-250ENST00000568290 PAX8Q06710 450 aa5.93□□□□□ -1.46
ATXN3-250ENST00000568290 COTL1Q14019 142 aa5.93□□□□□ -1.46
ATXN3-250ENST00000568290 ECSCRQ19T08 205 aa5.93□□□□□ -1.46
ATXN3-250ENST00000568290 ASPHD1Q5U4P2 390 aa5.93□□□□□ -1.46
ATXN3-250ENST00000568290 LHFPL4Q7Z7J7 247 aa5.93□□□□□ -1.46
ATXN3-250ENST00000568290 WFDC3Q8IUB2 231 aa5.93□□□□□ -1.46
ATXN3-250ENST00000568290 OR2K2Q8NGT1 345 aa5.93□□□□□ -1.46
ATXN3-250ENST00000568290 C17orf77Q96MU5 243 aa5.93□□□□□ -1.46
ATXN3-250ENST00000568290 CACNA1HO95180 2353 aa5.93□□□□□ -1.46
ATXN3-250ENST00000568290 TRAV12-1A0A0B4J245 112 aa5.92□□□□□ -1.46
ATXN3-250ENST00000568290 MUC21A0A0G2JKD1 596 aa5.92□□□□□ -1.46
ATXN3-250ENST00000568290 MUC21A0A140T8X8 626 aa5.92□□□□□ -1.46
ATXN3-250ENST00000568290 TMEM213A2RRL7 107 aa5.92□□□□□ -1.46
ATXN3-250ENST00000568290 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP5.92□□□□□ -1.46
ATXN3-250ENST00000568290 M0QZ24 198 aa5.92□□□□□ -1.46
ATXN3-250ENST00000568290 SNAI2O43623 268 aa5.92□□□□□ -1.46
ATXN3-250ENST00000568290 NDUFS7O75251 213 aa5.92□□□□□ -1.46
ATXN3-250ENST00000568290 SMIM17P0DL12 118 aa5.92□□□□□ -1.46
ATXN3-250ENST00000568290 ASIPP42127 132 aa5.92□□□□□ -1.46
ATXN3-250ENST00000568290 KLRD1Q13241 179 aa5.92□□□□□ -1.46
ATXN3-250ENST00000568290 MAJINQ3KP22 176 aa5.92□□□□□ -1.46
ATXN3-250ENST00000568290 MUC21Q5SSG8 566 aa5.92□□□□□ -1.46
ATXN3-250ENST00000568290 IL17RELQ6ZVW7 336 aa5.92□□□□□ -1.46
ATXN3-250ENST00000568290 PIMREGQ9BSJ6 248 aa5.92□□□□□ -1.46
ATXN3-250ENST00000568290 VCANP13611 3396 aa5.92□□□□□ -1.46
ATXN3-250ENST00000568290 PRUNE2Q8WUY3 3088 aa5.92□□□□□ -1.46
ATXN3-250ENST00000568290 TRAV41A0A0B4J266 112 aa5.91□□□□□ -1.46
ATXN3-250ENST00000568290 CENPVL3A0A0U1RRI6 287 aa5.91□□□□□ -1.46
ATXN3-250ENST00000568290 CBY3A6NI87 242 aa5.91□□□□□ -1.46
ATXN3-250ENST00000568290 LINC01619G3V211 115 aa5.91□□□□□ -1.46
ATXN3-250ENST00000568290 H7C1H1 209 aa5.91□□□□□ -1.46
ATXN3-250ENST00000568290 ATP6V0E1O15342 81 aa5.91□□□□□ -1.46
ATXN3-250ENST00000568290 NPYP01303 97 aa5.91□□□□□ -1.46
ATXN3-250ENST00000568290 GATA3P23771 443 aa5.91□□□□□ -1.46
ATXN3-250ENST00000568290 ARL3P36405 182 aa5.91□□□□□ -1.46
ATXN3-250ENST00000568290 NMUP48645 174 aa5.91□□□□□ -1.46
ATXN3-250ENST00000568290 DSCR9P59020 149 aa5.91□□□□□ -1.46
ATXN3-250ENST00000568290 HERVK_113P61574 105 aa5.91□□□□□ -1.46
ATXN3-250ENST00000568290 ADORA2A-AS1P86434 159 aa5.91□□□□□ -1.46
ATXN3-250ENST00000568290 PRR30Q53SZ7 412 aaPredicted RBP5.91□□□□□ -1.46
ATXN3-250ENST00000568290 KLF17Q5JT82 389 aaPredicted RBP5.91□□□□□ -1.46
ATXN3-250ENST00000568290 RUSC1-AS1Q66K80 236 aa5.91□□□□□ -1.46
ATXN3-250ENST00000568290 CLEC19AQ6UXS0 136 aa5.91□□□□□ -1.46
ATXN3-250ENST00000568290 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa5.91□□□□□ -1.46
ATXN3-250ENST00000568290 VPS25Q9BRG1 176 aa5.91□□□□□ -1.46
ATXN3-250ENST00000568290 DPH3P1Q9H4G8 78 aa5.91□□□□□ -1.46
ATXN3-250ENST00000568290 ZNF580Q9UK33 172 aa5.91□□□□□ -1.46
ATXN3-250ENST00000568290 IGHV1-69DA0A0B4J2H0 117 aa5.9□□□□□ -1.46
ATXN3-250ENST00000568290 GAGE12BA1L429 117 aa5.9□□□□□ -1.46
ATXN3-250ENST00000568290 TMEM89A2RUT3 159 aa5.9□□□□□ -1.46
ATXN3-250ENST00000568290 SAA4P35542 130 aa5.9□□□□□ -1.46
ATXN3-250ENST00000568290 PCP4P48539 62 aa5.9□□□□□ -1.46
ATXN3-250ENST00000568290 RPL32P62910 135 aaKnown RBP5.9□□□□□ -1.46
ATXN3-250ENST00000568290 FAM106AQ4KMX7 169 aa5.9□□□□□ -1.46
ATXN3-250ENST00000568290 LINC00173Q6ZV60 143 aa5.9□□□□□ -1.46
ATXN3-250ENST00000568290 VGLL1Q99990 258 aa5.9□□□□□ -1.46
ATXN3-250ENST00000568290 MEGF9Q9H1U4 602 aa5.9□□□□□ -1.46
ATXN3-250ENST00000568290 CST9LQ9H4G1 147 aa5.9□□□□□ -1.46
ATXN3-250ENST00000568290 ZMAT4Q9H898 229 aa5.9□□□□□ -1.46
ATXN3-250ENST00000568290 SMAD5-AS1Q9Y6J3 95 aa5.9□□□□□ -1.46
ATXN3-250ENST00000568290 MALRD1Q5VYJ5 2156 aa5.89□□□□□ -1.47
ATXN3-250ENST00000568290 A0A087WX48 190 aa5.89□□□□□ -1.47
ATXN3-250ENST00000568290 K7EMT4 169 aa5.89□□□□□ -1.47
ATXN3-250ENST00000568290 K7EP34 96 aa5.89□□□□□ -1.47
ATXN3-250ENST00000568290 TRGV3P03979 118 aa5.89□□□□□ -1.47
ATXN3-250ENST00000568290 IGF1P05019 195 aa5.89□□□□□ -1.47
ATXN3-250ENST00000568290 NDPQ00604 133 aa5.89□□□□□ -1.47
ATXN3-250ENST00000568290 SCGB2A2Q13296 93 aa5.89□□□□□ -1.47
ATXN3-250ENST00000568290 FOXE3Q13461 319 aa5.89□□□□□ -1.47
ATXN3-250ENST00000568290 OCIAD2Q56VL3 154 aa5.89□□□□□ -1.47
ATXN3-250ENST00000568290 AMMECR1LQ6DCA0 310 aa5.89□□□□□ -1.47
ATXN3-250ENST00000568290 PRSS57Q6UWY2 283 aa5.89□□□□□ -1.47
ATXN3-250ENST00000568290 DYNAPQ8N1N2 210 aa5.89□□□□□ -1.47
ATXN3-250ENST00000568290 C5orf56Q8N8D9 126 aa5.89□□□□□ -1.47
ATXN3-250ENST00000568290 SYT8Q8NBV8 401 aa5.89□□□□□ -1.47
ATXN3-250ENST00000568290 UBTD1Q9HAC8 227 aa5.89□□□□□ -1.47
ATXN3-250ENST00000568290 UFC1Q9Y3C8 167 aa5.89□□□□□ -1.47
ATXN3-250ENST00000568290 PHLDA3Q9Y5J5 127 aa5.89□□□□□ -1.47
ATXN3-250ENST00000568290 ICE1Q9Y2F5 2266 aa5.88□□□□□ -1.47
ATXN3-250ENST00000568290 OR11H12B2RN74 326 aa5.88□□□□□ -1.47
ATXN3-250ENST00000568290 OVOL3O00110 214 aa5.88□□□□□ -1.47
ATXN3-250ENST00000568290 IGHV1-69P01742 117 aa5.88□□□□□ -1.47
ATXN3-250ENST00000568290 CD24P25063 80 aa5.88□□□□□ -1.47
ATXN3-250ENST00000568290 ODF1Q14990 250 aa5.88□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 61.3 ms