RNA–Protein interactions for RNA: ENST00000568038.1

SMG1-214, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 2

Gene SMG1, Length 1,210 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-214ENST00000568038 RPH3ALQ9UNE2 315 aa5.74□□□□□ -1.49
SMG1-214ENST00000568038 YTHDF2Q9Y5A9 579 aaKnown RBP5.74□□□□□ -1.49
SMG1-214ENST00000568038 FAM74A7A6NL05 159 aa5.73□□□□□ -1.49
SMG1-214ENST00000568038 KNCNA6PVL3 124 aa5.73□□□□□ -1.49
SMG1-214ENST00000568038 OR11H12B2RN74 326 aa5.73□□□□□ -1.49
SMG1-214ENST00000568038 M0R3E3 92 aa5.73□□□□□ -1.49
SMG1-214ENST00000568038 SLC25A5P05141 298 aaKnown RBP5.73□□□□□ -1.49
SMG1-214ENST00000568038 NMBP08949 121 aa5.73□□□□□ -1.49
SMG1-214ENST00000568038 ZNF705DP0CH99 300 aaPredicted RBP5.73□□□□□ -1.49
SMG1-214ENST00000568038 ZNF705BP0CI00 300 aaPredicted RBP5.73□□□□□ -1.49
SMG1-214ENST00000568038 CMC4P56277 68 aaPredicted RBP5.73□□□□□ -1.49
SMG1-214ENST00000568038 RAB14P61106 215 aa5.73□□□□□ -1.49
SMG1-214ENST00000568038 HAGHQ16775 308 aa5.73□□□□□ -1.49
SMG1-214ENST00000568038 LYPD1Q8N2G4 141 aa5.73□□□□□ -1.49
SMG1-214ENST00000568038 OTORQ9NRC9 128 aa5.73□□□□□ -1.49
SMG1-214ENST00000568038 A0A1W2PRE2 83 aa5.72□□□□□ -1.49
SMG1-214ENST00000568038 GGTLC3B5MD39 225 aa5.72□□□□□ -1.49
SMG1-214ENST00000568038 PRAC2D3DTV9 90 aa5.72□□□□□ -1.49
SMG1-214ENST00000568038 F6UB75 175 aa5.72□□□□□ -1.49
SMG1-214ENST00000568038 MALP21145 153 aa5.72□□□□□ -1.49
SMG1-214ENST00000568038 CSN1S1P47710 185 aa5.72□□□□□ -1.49
SMG1-214ENST00000568038 ATP5G3P48201 142 aa5.72□□□□□ -1.49
SMG1-214ENST00000568038 PPT1P50897 306 aa5.72□□□□□ -1.49
SMG1-214ENST00000568038 GNG5P63218 68 aa5.72□□□□□ -1.49
SMG1-214ENST00000568038 ACTL10Q5JWF8 245 aa5.72□□□□□ -1.49
SMG1-214ENST00000568038 DEFB125Q8N687 156 aa5.72□□□□□ -1.49
SMG1-214ENST00000568038 LYPD6BQ8NI32 183 aa5.72□□□□□ -1.49
SMG1-214ENST00000568038 CMTM2Q8TAZ6 248 aa5.72□□□□□ -1.49
SMG1-214ENST00000568038 RPUSD4Q96CM3 377 aaKnown RBP5.72□□□□□ -1.49
SMG1-214ENST00000568038 MANBALQ9NQG1 85 aa5.72□□□□□ -1.49
SMG1-214ENST00000568038 CLEC5AQ9NY25 188 aa5.72□□□□□ -1.49
SMG1-214ENST00000568038 PRELID1Q9Y255 219 aa5.72□□□□□ -1.49
SMG1-214ENST00000568038 IGKV2-40A0A087WW87 121 aaPredicted RBP5.71□□□□□ -1.5
SMG1-214ENST00000568038 IFNA1P01562 189 aa5.71□□□□□ -1.5
SMG1-214ENST00000568038 IGKV2D-40P01614 121 aaPredicted RBP5.71□□□□□ -1.5
SMG1-214ENST00000568038 HIST1H1AQ02539 215 aaPredicted RBP5.71□□□□□ -1.5
SMG1-214ENST00000568038 KPRPQ5T749 579 aaPredicted RBP5.71□□□□□ -1.5
SMG1-214ENST00000568038 GDF5OSQ5U4N7 250 aa5.71□□□□□ -1.5
SMG1-214ENST00000568038 EBLN2Q6P2I7 272 aa5.71□□□□□ -1.5
SMG1-214ENST00000568038 C5orf17Q8NAS9 161 aa5.71□□□□□ -1.5
SMG1-214ENST00000568038 RXFP4Q8TDU9 374 aa5.71□□□□□ -1.5
SMG1-214ENST00000568038 MRPL53Q96EL3 112 aaKnown RBP5.71□□□□□ -1.5
SMG1-214ENST00000568038 RARRES2Q99969 163 aa5.71□□□□□ -1.5
SMG1-214ENST00000568038 FAM110AQ9BQ89 295 aa5.71□□□□□ -1.5
SMG1-214ENST00000568038 TUBA4BQ9H853 241 aa5.71□□□□□ -1.5
SMG1-214ENST00000568038 SRD5A3Q9H8P0 318 aa5.71□□□□□ -1.5
SMG1-214ENST00000568038 EPDR1Q9UM22 224 aa5.71□□□□□ -1.5
SMG1-214ENST00000568038 A0A0J9YX75 114 aa5.7□□□□□ -1.5
SMG1-214ENST00000568038 LOC102723971A0A1B0GUV8 181 aa5.7□□□□□ -1.5
SMG1-214ENST00000568038 RBFOX3A6NFN3 312 aa5.7□□□□□ -1.5
SMG1-214ENST00000568038 C11orf94C9JXX5 98 aa5.7□□□□□ -1.5
SMG1-214ENST00000568038 IGKV3-20P01619 116 aa5.7□□□□□ -1.5
SMG1-214ENST00000568038 BCL2P10415 239 aa5.7□□□□□ -1.5
SMG1-214ENST00000568038 RPL35AP18077 110 aaKnown RBP5.7□□□□□ -1.5
SMG1-214ENST00000568038 ERCC8Q13216 396 aa5.7□□□□□ -1.5
SMG1-214ENST00000568038 CLLU1Q5K131 121 aa5.7□□□□□ -1.5
SMG1-214ENST00000568038 FOXI2Q6ZQN5 318 aa5.7□□□□□ -1.5
SMG1-214ENST00000568038 GOLT1AQ6ZVE7 132 aa5.7□□□□□ -1.5
SMG1-214ENST00000568038 STHQ8IWL8 128 aa5.7□□□□□ -1.5
SMG1-214ENST00000568038 OR4B1Q8NGF8 309 aa5.7□□□□□ -1.5
SMG1-214ENST00000568038 OR8A1Q8NGG7 326 aa5.7□□□□□ -1.5
SMG1-214ENST00000568038 OR10J6PQ8NGY7 276 aa5.7□□□□□ -1.5
SMG1-214ENST00000568038 NKX6-2Q9C056 277 aaPredicted RBP5.7□□□□□ -1.5
SMG1-214ENST00000568038 EIF5A2Q9GZV4 153 aaKnown RBP5.7□□□□□ -1.5
SMG1-214ENST00000568038 SAV1Q9H4B6 383 aaPredicted RBP5.7□□□□□ -1.5
SMG1-214ENST00000568038 VAX2Q9UIW0 290 aa5.7□□□□□ -1.5
SMG1-214ENST00000568038 ARL2-SNX15V9GYD0 113 aa5.7□□□□□ -1.5
SMG1-214ENST00000568038 TRAV34A0A0B4J273 112 aa5.69□□□□□ -1.5
SMG1-214ENST00000568038 F6UZH7 168 aa5.69□□□□□ -1.5
SMG1-214ENST00000568038 H3BMM0 161 aa5.69□□□□□ -1.5
SMG1-214ENST00000568038 PEX7O00628 323 aa5.69□□□□□ -1.5
SMG1-214ENST00000568038 TCRAP04437 139 aa5.69□□□□□ -1.5
SMG1-214ENST00000568038 IGHV4-30-4P0DP06 118 aa5.69□□□□□ -1.5
SMG1-214ENST00000568038 HLA-DRB4P13762 266 aa5.69□□□□□ -1.5
SMG1-214ENST00000568038 CNN1P51911 297 aaKnown RBP5.69□□□□□ -1.5
SMG1-214ENST00000568038 PMS2P11Q13670 270 aa5.69□□□□□ -1.5
SMG1-214ENST00000568038 DEFB121Q5J5C9 76 aa5.69□□□□□ -1.5
SMG1-214ENST00000568038 ZNF506Q5JVG8 444 aa5.69□□□□□ -1.5
SMG1-214ENST00000568038 CCDC28AQ8IWP9 274 aa5.69□□□□□ -1.5
SMG1-214ENST00000568038 SGK494Q96LW2 274 aa5.69□□□□□ -1.5
SMG1-214ENST00000568038 FAM210AQ96ND0 272 aa5.69□□□□□ -1.5
SMG1-214ENST00000568038 VGLL1Q99990 258 aa5.69□□□□□ -1.5
SMG1-214ENST00000568038 PPP1R14DQ9NXH3 145 aa5.69□□□□□ -1.5
SMG1-214ENST00000568038 HLA-DRB4X5D2U9 266 aa5.69□□□□□ -1.5
SMG1-214ENST00000568038 AGRNO00468 2067 aa5.69□□□□□ -1.5
SMG1-214ENST00000568038 TRAV8-1A0A0A6YYK1 113 aa5.68□□□□□ -1.5
SMG1-214ENST00000568038 RBMY1BA6NDE4 496 aaKnown RBP5.68□□□□□ -1.5
SMG1-214ENST00000568038 RBMY1EA6NEQ0 496 aaKnown RBP5.68□□□□□ -1.5
SMG1-214ENST00000568038 K7EIL1 84 aa5.68□□□□□ -1.5
SMG1-214ENST00000568038 K7EQM0 130 aa5.68□□□□□ -1.5
SMG1-214ENST00000568038 DUSP14O95147 198 aaKnown RBP5.68□□□□□ -1.5
SMG1-214ENST00000568038 RBMY1DP0C7P1 496 aaKnown RBP5.68□□□□□ -1.5
SMG1-214ENST00000568038 TAGLN2P37802 199 aaKnown RBP5.68□□□□□ -1.5
SMG1-214ENST00000568038 AKR1C3P42330 323 aa5.68□□□□□ -1.5
SMG1-214ENST00000568038 FXYD7P58549 80 aa5.68□□□□□ -1.5
SMG1-214ENST00000568038 MEF2BQ02080 365 aaPredicted RBP5.68□□□□□ -1.5
SMG1-214ENST00000568038 TRPT1Q86TN4 253 aaKnown RBP5.68□□□□□ -1.5
SMG1-214ENST00000568038 CYB561D1Q8N8Q1 229 aa5.68□□□□□ -1.5
SMG1-214ENST00000568038 HIST1H2BAQ96A08 127 aa5.68□□□□□ -1.5
SMG1-214ENST00000568038 LINC00479Q96M42 142 aa5.68□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms