RNA–Protein interactions for RNA: ENST00000566493.1

UBR1-206, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 3

Gene UBR1, Length 598 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-206ENST00000566493 SLC25A5P05141 298 aaKnown RBP8.3□□□□□ -1.08
UBR1-206ENST00000566493 HOXA5P20719 270 aa8.3□□□□□ -1.08
UBR1-206ENST00000566493 FGF7P21781 194 aa8.3□□□□□ -1.08
UBR1-206ENST00000566493 DAZ2Q13117 558 aaKnown RBP8.3□□□□□ -1.08
UBR1-206ENST00000566493 ATP6V1FQ16864 119 aa8.3□□□□□ -1.08
UBR1-206ENST00000566493 VWC2Q2TAL6 325 aa8.3□□□□□ -1.08
UBR1-206ENST00000566493 ZNF680Q8NEM1 530 aa8.3□□□□□ -1.08
UBR1-206ENST00000566493 MRPL53Q96EL3 112 aaKnown RBP8.3□□□□□ -1.08
UBR1-206ENST00000566493 TMEM14CQ9P0S9 112 aa8.3□□□□□ -1.08
UBR1-206ENST00000566493 TRBV19A0A075B6N1 114 aa8.29□□□□□ -1.08
UBR1-206ENST00000566493 IGSF23A1L1A6 192 aa8.29□□□□□ -1.08
UBR1-206ENST00000566493 C7orf71A4D174 169 aa8.29□□□□□ -1.08
UBR1-206ENST00000566493 MPDU1O75352 247 aa8.29□□□□□ -1.08
UBR1-206ENST00000566493 HIST1H1EP10412 219 aaKnown RBP8.29□□□□□ -1.08
UBR1-206ENST00000566493 ESRGQ1W209 222 aa8.29□□□□□ -1.08
UBR1-206ENST00000566493 TMEM252Q8N6L7 170 aa8.29□□□□□ -1.08
UBR1-206ENST00000566493 LINC00477Q96M19 166 aa8.29□□□□□ -1.08
UBR1-206ENST00000566493 TMPRSS5Q9H3S3 457 aa8.29□□□□□ -1.08
UBR1-206ENST00000566493 C11orf1Q9H5F2 150 aa8.29□□□□□ -1.08
UBR1-206ENST00000566493 AAMDCQ9H7C9 122 aa8.29□□□□□ -1.08
UBR1-206ENST00000566493 GPN1Q9HCN4 374 aaPredicted RBP8.29□□□□□ -1.08
UBR1-206ENST00000566493 FAM240BA0A1B0GVZ2 78 aa8.28□□□□□ -1.08
UBR1-206ENST00000566493 M0R3E3 92 aa8.28□□□□□ -1.08
UBR1-206ENST00000566493 CDK2AP2O75956 126 aa8.28□□□□□ -1.08
UBR1-206ENST00000566493 RNASE4P34096 147 aaKnown RBP8.28□□□□□ -1.08
UBR1-206ENST00000566493 ERCC8Q13216 396 aa8.28□□□□□ -1.08
UBR1-206ENST00000566493 RAB32Q13637 225 aa8.28□□□□□ -1.08
UBR1-206ENST00000566493 PDE6HQ13956 83 aa8.28□□□□□ -1.08
UBR1-206ENST00000566493 Q6ZTI0 123 aa8.28□□□□□ -1.08
UBR1-206ENST00000566493 EIF4E3Q8N5X7 224 aaKnown RBP8.28□□□□□ -1.08
UBR1-206ENST00000566493 CHAC2Q8WUX2 184 aa8.28□□□□□ -1.08
UBR1-206ENST00000566493 BLNKQ8WV28 456 aa8.28□□□□□ -1.08
UBR1-206ENST00000566493 UPK3BQ9BT76 320 aa8.28□□□□□ -1.08
UBR1-206ENST00000566493 CCDC32Q9BV29 185 aa8.28□□□□□ -1.08
UBR1-206ENST00000566493 NDUFA13Q9P0J0 144 aa8.28□□□□□ -1.08
UBR1-206ENST00000566493 TRGV1A0A0A0MS02 117 aa8.27□□□□□ -1.09
UBR1-206ENST00000566493 A0A1W2PPQ1 181 aa8.27□□□□□ -1.09
UBR1-206ENST00000566493 GPX1P07203 203 aa8.27□□□□□ -1.09
UBR1-206ENST00000566493 TMEM78Q5T7P6 136 aa8.27□□□□□ -1.09
UBR1-206ENST00000566493 MZT2BQ6NZ67 158 aa8.27□□□□□ -1.09
UBR1-206ENST00000566493 EXOC3-AS1Q8N2X6 119 aa8.27□□□□□ -1.09
UBR1-206ENST00000566493 AGPAT4-IT1Q9H0P7 198 aa8.27□□□□□ -1.09
UBR1-206ENST00000566493 Q9H3A6 140 aa8.27□□□□□ -1.09
UBR1-206ENST00000566493 GSN-AS1Q9NRJ2 163 aa8.27□□□□□ -1.09
UBR1-206ENST00000566493 MRPS16Q9Y3D3 137 aaKnown RBP8.27□□□□□ -1.09
UBR1-206ENST00000566493 KLLNB2CW77 178 aa8.26□□□□□ -1.09
UBR1-206ENST00000566493 NDUFB4O95168 129 aa8.26□□□□□ -1.09
UBR1-206ENST00000566493 PYYP10082 97 aa8.26□□□□□ -1.09
UBR1-206ENST00000566493 CD300CQ08708 224 aa8.26□□□□□ -1.09
UBR1-206ENST00000566493 IL15RAQ13261 267 aa8.26□□□□□ -1.09
UBR1-206ENST00000566493 BTN1A1Q13410 526 aa8.26□□□□□ -1.09
UBR1-206ENST00000566493 ICAM4Q14773 271 aa8.26□□□□□ -1.09
UBR1-206ENST00000566493 ANXA2RQ3ZCQ2 193 aa8.26□□□□□ -1.09
UBR1-206ENST00000566493 C9orf47Q6ZRZ4 202 aa8.26□□□□□ -1.09
UBR1-206ENST00000566493 SPATA12Q7Z6I5 190 aa8.26□□□□□ -1.09
UBR1-206ENST00000566493 LINC00467Q9BRT7 94 aa8.26□□□□□ -1.09
UBR1-206ENST00000566493 NPCDR1Q9BY65 106 aa8.26□□□□□ -1.09
UBR1-206ENST00000566493 SLC25A31Q9H0C2 315 aa8.26□□□□□ -1.09
UBR1-206ENST00000566493 FUT9Q9Y231 359 aa8.26□□□□□ -1.09
UBR1-206ENST00000566493 RGS13O14921 159 aa8.25□□□□□ -1.09
UBR1-206ENST00000566493 ZNF324O75467 553 aaPredicted RBP8.25□□□□□ -1.09
UBR1-206ENST00000566493 NMBP08949 121 aa8.25□□□□□ -1.09
UBR1-206ENST00000566493 BTF3P20290 206 aaKnown RBP8.25□□□□□ -1.09
UBR1-206ENST00000566493 FAM122CQ6P4D5 195 aa8.25□□□□□ -1.09
UBR1-206ENST00000566493 MAPKAPK5-AS1Q8N8E1 139 aa8.25□□□□□ -1.09
UBR1-206ENST00000566493 C11orf72Q8NBR9 251 aa8.25□□□□□ -1.09
UBR1-206ENST00000566493 FAM19A4Q96LR4 140 aa8.25□□□□□ -1.09
UBR1-206ENST00000566493 C18orf15Q96N68 181 aa8.25□□□□□ -1.09
UBR1-206ENST00000566493 SLC25A2Q9BXI2 301 aa8.25□□□□□ -1.09
UBR1-206ENST00000566493 KCNIP2Q9NS61 270 aa8.25□□□□□ -1.09
UBR1-206ENST00000566493 ABCA13Q86UQ4 5058 aa8.24□□□□□ -1.09
UBR1-206ENST00000566493 A0A096LPF7 62 aa8.24□□□□□ -1.09
UBR1-206ENST00000566493 SPINK4O60575 86 aa8.24□□□□□ -1.09
UBR1-206ENST00000566493 NBEAP1P0C6P0 100 aa8.24□□□□□ -1.09
UBR1-206ENST00000566493 CRISP2P16562 243 aa8.24□□□□□ -1.09
UBR1-206ENST00000566493 TCL1AP56279 114 aa8.24□□□□□ -1.09
UBR1-206ENST00000566493 NHLH2Q02577 135 aa8.24□□□□□ -1.09
UBR1-206ENST00000566493 GCSAMLQ5JQS6 135 aa8.24□□□□□ -1.09
UBR1-206ENST00000566493 MIR17HGQ75NE6 70 aa8.24□□□□□ -1.09
UBR1-206ENST00000566493 OR5C1Q8NGR4 320 aa8.24□□□□□ -1.09
UBR1-206ENST00000566493 THAP6Q8TBB0 222 aa8.24□□□□□ -1.09
UBR1-206ENST00000566493 VSIG2Q96IQ7 327 aa8.24□□□□□ -1.09
UBR1-206ENST00000566493 ARPC5LQ9BPX5 153 aa8.24□□□□□ -1.09
UBR1-206ENST00000566493 KRTAP4-5Q9BYR2 181 aa8.24□□□□□ -1.09
UBR1-206ENST00000566493 KRTAP1-5Q9BYS1 174 aa8.24□□□□□ -1.09
UBR1-206ENST00000566493 OR51M1Q9H341 326 aa8.24□□□□□ -1.09
UBR1-206ENST00000566493 KLF12Q9Y4X4 402 aa8.24□□□□□ -1.09
UBR1-206ENST00000566493 HSPG2P98160 4391 aa8.24□□□□□ -1.09
UBR1-206ENST00000566493 IGHV1OR15-1A0A075B7D0 117 aa8.23□□□□□ -1.09
UBR1-206ENST00000566493 IGKV2-40A0A087WW87 121 aaPredicted RBP8.23□□□□□ -1.09
UBR1-206ENST00000566493 E5RGE8 158 aa8.23□□□□□ -1.09
UBR1-206ENST00000566493 PAX4O43316 350 aa8.23□□□□□ -1.09
UBR1-206ENST00000566493 IGKV2D-40P01614 121 aaPredicted RBP8.23□□□□□ -1.09
UBR1-206ENST00000566493 CSN1S1P47710 185 aa8.23□□□□□ -1.09
UBR1-206ENST00000566493 SLAQ13239 276 aa8.23□□□□□ -1.09
UBR1-206ENST00000566493 IBA57Q5T440 356 aaKnown RBP8.23□□□□□ -1.09
UBR1-206ENST00000566493 ST6GAL2Q96JF0 529 aa8.23□□□□□ -1.09
UBR1-206ENST00000566493 VGLL1Q99990 258 aa8.23□□□□□ -1.09
UBR1-206ENST00000566493 PAXXQ9BUH6 204 aa8.23□□□□□ -1.09
UBR1-206ENST00000566493 MRPL32Q9BYC8 188 aaKnown RBP8.23□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms