RNA–Protein interactions for RNA: ENST00000566290.5

RAB40C-210, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB40C, Length 753 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-210ENST00000566290 A8MWP6 167 aa12.8□□□□□ -0.36
RAB40C-210ENST00000566290 M0R3E3 92 aa12.8□□□□□ -0.36
RAB40C-210ENST00000566290 S100A8P05109 93 aa12.8□□□□□ -0.36
RAB40C-210ENST00000566290 SNRPCP09234 159 aaKnown RBP12.8□□□□□ -0.36
RAB40C-210ENST00000566290 LGALS1P09382 135 aaKnown RBP12.8□□□□□ -0.36
RAB40C-210ENST00000566290 TRGC1P0CF51 173 aa12.8□□□□□ -0.36
RAB40C-210ENST00000566290 BMI1P35226 326 aa12.8□□□□□ -0.36
RAB40C-210ENST00000566290 FAM106AQ4KMX7 169 aa12.8□□□□□ -0.36
RAB40C-210ENST00000566290 REC114Q7Z4M0 266 aa12.8□□□□□ -0.36
RAB40C-210ENST00000566290 LGALS9O00182 355 aa12.79□□□□□ -0.36
RAB40C-210ENST00000566290 CHEK1O14757 476 aa12.79□□□□□ -0.36
RAB40C-210ENST00000566290 TRBV12-3P01733 135 aa12.79□□□□□ -0.36
RAB40C-210ENST00000566290 P01737 135 aa12.79□□□□□ -0.36
RAB40C-210ENST00000566290 FOXA3P55318 350 aaPredicted RBP12.79□□□□□ -0.36
RAB40C-210ENST00000566290 SNRPEP62304 92 aaKnown RBP12.79□□□□□ -0.36
RAB40C-210ENST00000566290 Q6AWC8 147 aa12.79□□□□□ -0.36
RAB40C-210ENST00000566290 GBGT1Q8N5D6 347 aa12.79□□□□□ -0.36
RAB40C-210ENST00000566290 RPH3ALQ9UNE2 315 aa12.79□□□□□ -0.36
RAB40C-210ENST00000566290 UFC1Q9Y3C8 167 aa12.79□□□□□ -0.36
RAB40C-210ENST00000566290 IGHV3-35A0A0C4DH35 117 aa12.78□□□□□ -0.36
RAB40C-210ENST00000566290 IGHV7-4-1A0A0J9YVY3 117 aa12.78□□□□□ -0.36
RAB40C-210ENST00000566290 HLA-DQA1P01909 254 aa12.78□□□□□ -0.36
RAB40C-210ENST00000566290 CDX1P47902 265 aaPredicted RBP12.78□□□□□ -0.36
RAB40C-210ENST00000566290 UNQ9165/PRO28630Q6UXU0 137 aa12.78□□□□□ -0.36
RAB40C-210ENST00000566290 PRNTQ86SH4 94 aa12.78□□□□□ -0.36
RAB40C-210ENST00000566290 NHLRC2Q8NBF2 726 aa12.78□□□□□ -0.36
RAB40C-210ENST00000566290 DAZAP1Q96EP5 407 aaKnown RBP12.78□□□□□ -0.36
RAB40C-210ENST00000566290 SERTAD4Q9NUC0 356 aa12.78□□□□□ -0.36
RAB40C-210ENST00000566290 LENEPQ9Y5L5 61 aa12.78□□□□□ -0.36
RAB40C-210ENST00000566290 TRAV8-1A0A0A6YYK1 113 aa12.77□□□□□ -0.37
RAB40C-210ENST00000566290 CT45A10P0DMU9 189 aa12.77□□□□□ -0.37
RAB40C-210ENST00000566290 FABP9Q0Z7S8 132 aa12.77□□□□□ -0.37
RAB40C-210ENST00000566290 TMEM95Q3KNT9 176 aa12.77□□□□□ -0.37
RAB40C-210ENST00000566290 LCN12Q6JVE5 192 aa12.77□□□□□ -0.37
RAB40C-210ENST00000566290 C8orf86Q6ZUL3 223 aa12.77□□□□□ -0.37
RAB40C-210ENST00000566290 PRR25Q96S07 402 aa12.77□□□□□ -0.37
RAB40C-210ENST00000566290 TRAPPC1Q9Y5R8 145 aa12.77□□□□□ -0.37
RAB40C-210ENST00000566290 TRAV8-2A0A0B4J237 113 aa12.76□□□□□ -0.37
RAB40C-210ENST00000566290 TRBV7-9A0A0J9YWB2 115 aa12.76□□□□□ -0.37
RAB40C-210ENST00000566290 SOCS3O14543 225 aa12.76□□□□□ -0.37
RAB40C-210ENST00000566290 APOHP02749 345 aaPredicted RBP12.76□□□□□ -0.37
RAB40C-210ENST00000566290 ZC2HC1AQ96GY0 325 aa12.76□□□□□ -0.37
RAB40C-210ENST00000566290 NDFIP1Q9BT67 221 aa12.76□□□□□ -0.37
RAB40C-210ENST00000566290 SMPXQ9UHP9 88 aa12.76□□□□□ -0.37
RAB40C-210ENST00000566290 A0A1B0GXF2 115 aa12.75□□□□□ -0.37
RAB40C-210ENST00000566290 NDUFA7O95182 113 aa12.75□□□□□ -0.37
RAB40C-210ENST00000566290 IGHV3-11P01762 117 aa12.75□□□□□ -0.37
RAB40C-210ENST00000566290 KRTAP10-3P60369 221 aa12.75□□□□□ -0.37
RAB40C-210ENST00000566290 PRR27Q6MZM9 219 aa12.75□□□□□ -0.37
RAB40C-210ENST00000566290 LINC00322Q6ZN03 302 aaPredicted RBP12.75□□□□□ -0.37
RAB40C-210ENST00000566290 C9orf47Q6ZRZ4 202 aa12.75□□□□□ -0.37
RAB40C-210ENST00000566290 Q6ZSV7 163 aa12.75□□□□□ -0.37
RAB40C-210ENST00000566290 NEU1Q99519 415 aa12.75□□□□□ -0.37
RAB40C-210ENST00000566290 IGHV3OR16-8A0A075B7F1 116 aa12.74□□□□□ -0.37
RAB40C-210ENST00000566290 A0A1B0GW15 77 aa12.74□□□□□ -0.37
RAB40C-210ENST00000566290 TMEM136Q6ZRR5 245 aa12.74□□□□□ -0.37
RAB40C-210ENST00000566290 RBPMS2Q6ZRY4 209 aaKnown RBP12.74□□□□□ -0.37
RAB40C-210ENST00000566290 NUP35Q8NFH5 326 aa12.74□□□□□ -0.37
RAB40C-210ENST00000566290 LINC01006Q8NI28 216 aa12.74□□□□□ -0.37
RAB40C-210ENST00000566290 NRN1Q9NPD7 142 aa12.74□□□□□ -0.37
RAB40C-210ENST00000566290 RPLP1P05386 114 aaKnown RBP12.73□□□□□ -0.37
RAB40C-210ENST00000566290 RPS20P60866 119 aaKnown RBP12.73□□□□□ -0.37
RAB40C-210ENST00000566290 GATD1Q8NB37 220 aa12.73□□□□□ -0.37
RAB40C-210ENST00000566290 IGKV2-40A0A087WW87 121 aaPredicted RBP12.72□□□□□ -0.37
RAB40C-210ENST00000566290 XKRY2A2RUG3 117 aa12.72□□□□□ -0.37
RAB40C-210ENST00000566290 HIGD1CA8MV81 97 aa12.72□□□□□ -0.37
RAB40C-210ENST00000566290 IGKV2D-40P01614 121 aaPredicted RBP12.72□□□□□ -0.37
RAB40C-210ENST00000566290 SMIM6P0DI80 62 aa12.72□□□□□ -0.37
RAB40C-210ENST00000566290 NDUFA6P56556 154 aa12.72□□□□□ -0.37
RAB40C-210ENST00000566290 SMUG1Q53HV7 270 aa12.72□□□□□ -0.37
RAB40C-210ENST00000566290 FAM162BQ5T6X4 162 aa12.72□□□□□ -0.37
RAB40C-210ENST00000566290 HIST3H2BBQ8N257 126 aa12.72□□□□□ -0.37
RAB40C-210ENST00000566290 SGK494Q96LW2 274 aa12.72□□□□□ -0.37
RAB40C-210ENST00000566290 RHPN1-AS1Q9BWJ2 59 aa12.72□□□□□ -0.37
RAB40C-210ENST00000566290 MRPL18Q9H0U6 180 aaKnown RBP12.72□□□□□ -0.37
RAB40C-210ENST00000566290 SNURFLB1AK76 121 aa12.71□□□□□ -0.37
RAB40C-210ENST00000566290 OVOL1O14753 267 aa12.71□□□□□ -0.37
RAB40C-210ENST00000566290 OR2D3Q8NGH3 330 aa12.71□□□□□ -0.37
RAB40C-210ENST00000566290 C16orf95Q9H693 158 aa12.71□□□□□ -0.37
RAB40C-210ENST00000566290 TMEM213A2RRL7 107 aa12.7□□□□□ -0.38
RAB40C-210ENST00000566290 ZNF207O43670 478 aaKnown RBP12.7□□□□□ -0.38
RAB40C-210ENST00000566290 CA1P00915 261 aaPredicted RBP12.7□□□□□ -0.38
RAB40C-210ENST00000566290 ESDP10768 282 aa12.7□□□□□ -0.38
RAB40C-210ENST00000566290 CBLN1P23435 193 aa12.7□□□□□ -0.38
RAB40C-210ENST00000566290 CRIP1P50238 77 aa12.7□□□□□ -0.38
RAB40C-210ENST00000566290 ZNF138P52744 262 aa12.7□□□□□ -0.38
RAB40C-210ENST00000566290 HBBP68871 147 aa12.7□□□□□ -0.38
RAB40C-210ENST00000566290 Q0VG73 95 aa12.7□□□□□ -0.38
RAB40C-210ENST00000566290 DMRTA1Q5VZB9 504 aa12.7□□□□□ -0.38
RAB40C-210ENST00000566290 LCNL1Q6ZST4 164 aa12.7□□□□□ -0.38
RAB40C-210ENST00000566290 LINC00518Q8N0U6 118 aa12.7□□□□□ -0.38
RAB40C-210ENST00000566290 KLHDC1Q8N7A1 406 aa12.7□□□□□ -0.38
RAB40C-210ENST00000566290 C4orf3Q8WVX3 66 aa12.7□□□□□ -0.38
RAB40C-210ENST00000566290 GTSF1Q8WW33 167 aa12.7□□□□□ -0.38
RAB40C-210ENST00000566290 C16orf92Q96LL3 132 aa12.7□□□□□ -0.38
RAB40C-210ENST00000566290 ASCL2Q99929 193 aa12.7□□□□□ -0.38
RAB40C-210ENST00000566290 RNF114Q9Y508 228 aa12.7□□□□□ -0.38
RAB40C-210ENST00000566290 TCL1AP56279 114 aa12.69□□□□□ -0.38
RAB40C-210ENST00000566290 PROK1P58294 105 aa12.69□□□□□ -0.38
RAB40C-210ENST00000566290 TMEM78Q5T7P6 136 aa12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 63.9 ms