RNA–Protein interactions for RNA: ENST00000564353.5

CLK3-215, Transcript of CDC like kinase 3, humanhuman

TSL 2

Gene CLK3, Length 2,847 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-215ENST00000564353 CTSGP08311 255 aa10.51□□□□□ -0.73
CLK3-215ENST00000564353 C15orf32Q32M92 178 aa10.51□□□□□ -0.73
CLK3-215ENST00000564353 GFRA4Q9GZZ7 299 aa10.51□□□□□ -0.73
CLK3-215ENST00000564353 SMAD5-AS1Q9Y6J3 95 aa10.51□□□□□ -0.73
CLK3-215ENST00000564353 IGHV7-81A0A0B4J1V7 117 aa10.5□□□□□ -0.73
CLK3-215ENST00000564353 ODF3BA8MYP8 253 aa10.5□□□□□ -0.73
CLK3-215ENST00000564353 J3KRW8 73 aa10.5□□□□□ -0.73
CLK3-215ENST00000564353 EGR2P11161 476 aaPredicted RBP10.5□□□□□ -0.73
CLK3-215ENST00000564353 SMAGPQ0VAQ4 97 aa10.5□□□□□ -0.73
CLK3-215ENST00000564353 AMMECR1LQ6DCA0 310 aa10.5□□□□□ -0.73
CLK3-215ENST00000564353 Q6ZQT7 251 aa10.5□□□□□ -0.73
CLK3-215ENST00000564353 NPBQ8NG41 125 aa10.5□□□□□ -0.73
CLK3-215ENST00000564353 NEU4Q8WWR8 484 aaPredicted RBP10.5□□□□□ -0.73
CLK3-215ENST00000564353 CLEC3BP05452 202 aa10.5□□□□□ -0.73
CLK3-215ENST00000564353 CSN1S1P47710 185 aa10.5□□□□□ -0.73
CLK3-215ENST00000564353 RAB9AP51151 201 aa10.5□□□□□ -0.73
CLK3-215ENST00000564353 RIGQ13278 110 aa10.5□□□□□ -0.73
CLK3-215ENST00000564353 FA2HQ7L5A8 372 aa10.5□□□□□ -0.73
CLK3-215ENST00000564353 AP5S1Q9NUS5 200 aa10.5□□□□□ -0.73
CLK3-215ENST00000564353 A0A087X0K7 114 aa10.49□□□□□ -0.73
CLK3-215ENST00000564353 ORM1P02763 201 aa10.49□□□□□ -0.73
CLK3-215ENST00000564353 TWIST1Q15672 202 aa10.49□□□□□ -0.73
CLK3-215ENST00000564353 RNF5Q99942 180 aa10.49□□□□□ -0.73
CLK3-215ENST00000564353 NDFIP1Q9BT67 221 aa10.49□□□□□ -0.73
CLK3-215ENST00000564353 MAP1LC3CQ9BXW4 147 aa10.49□□□□□ -0.73
CLK3-215ENST00000564353 PIEZO1Q92508 2521 aa10.49□□□□□ -0.73
CLK3-215ENST00000564353 SPRY2O43597 315 aa10.49□□□□□ -0.73
CLK3-215ENST00000564353 CLEC19AQ6UXS0 136 aa10.49□□□□□ -0.73
CLK3-215ENST00000564353 ATP6V0E1O15342 81 aa10.48□□□□□ -0.73
CLK3-215ENST00000564353 NUDT3O95989 172 aa10.48□□□□□ -0.73
CLK3-215ENST00000564353 OR5AL1P0C617 328 aa10.48□□□□□ -0.73
CLK3-215ENST00000564353 C11orf71Q6IPW1 123 aa10.48□□□□□ -0.73
CLK3-215ENST00000564353 CHCHD1Q96BP2 118 aaKnown RBP10.48□□□□□ -0.73
CLK3-215ENST00000564353 GTSF1LQ9H1H1 148 aa10.48□□□□□ -0.73
CLK3-215ENST00000564353 UQCRFS1P47985 274 aa10.48□□□□□ -0.73
CLK3-215ENST00000564353 RHOGP84095 191 aa10.48□□□□□ -0.73
CLK3-215ENST00000564353 KLRB1Q12918 225 aa10.48□□□□□ -0.73
CLK3-215ENST00000564353 BPESC1Q9GZL8 116 aa10.48□□□□□ -0.73
CLK3-215ENST00000564353 SOX21Q9Y651 276 aaPredicted RBP10.48□□□□□ -0.73
CLK3-215ENST00000564353 Q8N9W7 124 aa10.48□□□□□ -0.73
CLK3-215ENST00000564353 C18orf15Q96N68 181 aa10.48□□□□□ -0.73
CLK3-215ENST00000564353 ATP6V0BQ99437 205 aa10.48□□□□□ -0.73
CLK3-215ENST00000564353 IGHG4P01861 327 aa10.47□□□□□ -0.73
CLK3-215ENST00000564353 EVI2AP22794 236 aa10.47□□□□□ -0.73
CLK3-215ENST00000564353 SAA4P35542 130 aa10.47□□□□□ -0.73
CLK3-215ENST00000564353 PAX2Q02962 417 aa10.47□□□□□ -0.73
CLK3-215ENST00000564353 RABAC1Q9UI14 185 aa10.47□□□□□ -0.73
CLK3-215ENST00000564353 M0R1W7 72 aa10.47□□□□□ -0.73
CLK3-215ENST00000564353 FAM162BQ5T6X4 162 aa10.47□□□□□ -0.73
CLK3-215ENST00000564353 PRR25Q96S07 402 aa10.47□□□□□ -0.73
CLK3-215ENST00000564353 SIGLEC8Q9NYZ4 499 aa10.47□□□□□ -0.73
CLK3-215ENST00000564353 GATA1P15976 413 aaPredicted RBP10.46□□□□□ -0.73
CLK3-215ENST00000564353 DEFB1P60022 68 aa10.46□□□□□ -0.73
CLK3-215ENST00000564353 FBXL19-AS1Q494R0 122 aa10.46□□□□□ -0.73
CLK3-215ENST00000564353 TTC9CQ8N5M4 171 aa10.46□□□□□ -0.73
CLK3-215ENST00000564353 PRELID3AQ96N28 172 aa10.46□□□□□ -0.73
CLK3-215ENST00000564353 TMEM191AQ9H0A3 160 aa10.46□□□□□ -0.73
CLK3-215ENST00000564353 SMPXQ9UHP9 88 aa10.46□□□□□ -0.73
CLK3-215ENST00000564353 IGKV3-7A0A075B6H7 116 aa10.46□□□□□ -0.74
CLK3-215ENST00000564353 AZU1P20160 251 aa10.46□□□□□ -0.74
CLK3-215ENST00000564353 BRD3OSQ6XYD6 125 aa10.46□□□□□ -0.74
CLK3-215ENST00000564353 FAM231BA6NCW3 169 aa10.45□□□□□ -0.74
CLK3-215ENST00000564353 MRPL51Q4U2R6 128 aaKnown RBP10.45□□□□□ -0.74
CLK3-215ENST00000564353 IL17RELQ6ZVW7 336 aa10.45□□□□□ -0.74
CLK3-215ENST00000564353 THYN1Q9P016 225 aa10.45□□□□□ -0.74
CLK3-215ENST00000564353 C19orf84I3L1E1 186 aa10.45□□□□□ -0.74
CLK3-215ENST00000564353 NPYP01303 97 aa10.45□□□□□ -0.74
CLK3-215ENST00000564353 RPL7P18124 248 aaKnown RBP10.45□□□□□ -0.74
CLK3-215ENST00000564353 PIP4P2Q8N4L2 257 aa10.45□□□□□ -0.74
CLK3-215ENST00000564353 ZNF479Q96JC4 524 aa10.45□□□□□ -0.74
CLK3-215ENST00000564353 PKD1L2Q7Z442 2459 aa10.45□□□□□ -0.74
CLK3-215ENST00000564353 A0A096LNJ9 63 aa10.44□□□□□ -0.74
CLK3-215ENST00000564353 CKS2P33552 79 aa10.44□□□□□ -0.74
CLK3-215ENST00000564353 CCDC144NLQ6NUI1 221 aa10.44□□□□□ -0.74
CLK3-215ENST00000564353 ZNF747Q9BV97 191 aa10.44□□□□□ -0.74
CLK3-215ENST00000564353 CFAP46Q8IYW2 2715 aa10.44□□□□□ -0.74
CLK3-215ENST00000564353 SLC25A34Q6PIV7 304 aa10.44□□□□□ -0.74
CLK3-215ENST00000564353 LYPD1Q8N2G4 141 aa10.44□□□□□ -0.74
CLK3-215ENST00000564353 SRSF8Q9BRL6 282 aaKnown RBP10.44□□□□□ -0.74
CLK3-215ENST00000564353 HSPB8Q9UJY1 196 aa10.44□□□□□ -0.74
CLK3-215ENST00000564353 MRPS16Q9Y3D3 137 aaKnown RBP10.44□□□□□ -0.74
CLK3-215ENST00000564353 G3V4G9 280 aa10.43□□□□□ -0.74
CLK3-215ENST00000564353 CACNG7P62955 275 aa10.43□□□□□ -0.74
CLK3-215ENST00000564353 Q8N6K4 173 aa10.43□□□□□ -0.74
CLK3-215ENST00000564353 FER1L6-AS1Q8NA97 138 aa10.43□□□□□ -0.74
CLK3-215ENST00000564353 CENPEQ02224 2701 aa10.43□□□□□ -0.74
CLK3-215ENST00000564353 CRXO43186 299 aaPredicted RBP10.43□□□□□ -0.74
CLK3-215ENST00000564353 UCNP55089 124 aa10.43□□□□□ -0.74
CLK3-215ENST00000564353 CKS1BP61024 79 aa10.43□□□□□ -0.74
CLK3-215ENST00000564353 LCNL1Q6ZST4 164 aa10.43□□□□□ -0.74
CLK3-215ENST00000564353 NAA38Q9BRA0 125 aaKnown RBP10.43□□□□□ -0.74
CLK3-215ENST00000564353 SIRPDQ9H106 197 aa10.43□□□□□ -0.74
CLK3-215ENST00000564353 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP10.43□□□□□ -0.74
CLK3-215ENST00000564353 PSG9Q00887 426 aa10.43□□□□□ -0.74
CLK3-215ENST00000564353 FAM104BQ5XKR9 115 aa10.43□□□□□ -0.74
CLK3-215ENST00000564353 OR10AG1Q8NH19 301 aa10.43□□□□□ -0.74
CLK3-215ENST00000564353 RPS20P60866 119 aaKnown RBP10.42□□□□□ -0.74
CLK3-215ENST00000564353 ZNF575Q86XF7 245 aa10.42□□□□□ -0.74
CLK3-215ENST00000564353 CCDC140Q96MF4 163 aa10.42□□□□□ -0.74
CLK3-215ENST00000564353 FLNCQ14315 2725 aa10.42□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms