RNA–Protein interactions for RNA: ENST00000563790.5

HDGFL3-204, Transcript of HDGF like 3, humanhuman

TSL 3

Gene HDGFL3, Length 934 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDGFL3-204ENST00000563790 SSBP1Q04837 148 aaKnown RBP6.48□□□□□ -1.37
HDGFL3-204ENST00000563790 PSG3Q16557 428 aa6.48□□□□□ -1.37
HDGFL3-204ENST00000563790 CTF1Q16619 201 aa6.48□□□□□ -1.37
HDGFL3-204ENST00000563790 GFI1BQ5VTD9 330 aa6.48□□□□□ -1.37
HDGFL3-204ENST00000563790 GGNBP1Q5YKI7 109 aa6.48□□□□□ -1.37
HDGFL3-204ENST00000563790 ZNF738Q8NE65 137 aa6.48□□□□□ -1.37
HDGFL3-204ENST00000563790 OR51S1Q8NGJ8 323 aa6.48□□□□□ -1.37
HDGFL3-204ENST00000563790 SMIM4Q8WVI0 70 aa6.48□□□□□ -1.37
HDGFL3-204ENST00000563790 NAA50Q9GZZ1 169 aaKnown RBP6.48□□□□□ -1.37
HDGFL3-204ENST00000563790 Q9H521 79 aa6.48□□□□□ -1.37
HDGFL3-204ENST00000563790 TRGV2A0A075B6R0 118 aa6.47□□□□□ -1.37
HDGFL3-204ENST00000563790 LINC00854A0A1B0GVQ3 168 aa6.47□□□□□ -1.37
HDGFL3-204ENST00000563790 FAM25AB3EWG3 89 aa6.47□□□□□ -1.37
HDGFL3-204ENST00000563790 FAM25CB3EWG5 89 aa6.47□□□□□ -1.37
HDGFL3-204ENST00000563790 FAM25GB3EWG6 89 aa6.47□□□□□ -1.37
HDGFL3-204ENST00000563790 PRAC2D3DTV9 90 aa6.47□□□□□ -1.37
HDGFL3-204ENST00000563790 IGHV3-30P01768 117 aa6.47□□□□□ -1.37
HDGFL3-204ENST00000563790 IGHV3-33P01772 117 aa6.47□□□□□ -1.37
HDGFL3-204ENST00000563790 IGHV3-30-3P0DP02 117 aa6.47□□□□□ -1.37
HDGFL3-204ENST00000563790 IGHV3-30-5P0DP03 117 aa6.47□□□□□ -1.37
HDGFL3-204ENST00000563790 IAPPP10997 89 aa6.47□□□□□ -1.37
HDGFL3-204ENST00000563790 ORM2P19652 201 aa6.47□□□□□ -1.37
HDGFL3-204ENST00000563790 SLAQ13239 276 aa6.47□□□□□ -1.37
HDGFL3-204ENST00000563790 ZNF846Q147U1 533 aa6.47□□□□□ -1.37
HDGFL3-204ENST00000563790 FAM162BQ5T6X4 162 aa6.47□□□□□ -1.37
HDGFL3-204ENST00000563790 PATE2Q6UY27 113 aa6.47□□□□□ -1.37
HDGFL3-204ENST00000563790 ACOT7LQ6ZUV0 252 aa6.47□□□□□ -1.37
HDGFL3-204ENST00000563790 C11orf72Q8NBR9 251 aa6.47□□□□□ -1.37
HDGFL3-204ENST00000563790 ZC2HC1AQ96GY0 325 aa6.47□□□□□ -1.37
HDGFL3-204ENST00000563790 C20orf144Q9BQM9 153 aa6.47□□□□□ -1.37
HDGFL3-204ENST00000563790 PMS2P5A8MQ11 134 aa6.46□□□□□ -1.38
HDGFL3-204ENST00000563790 SNURFLB1AK76 121 aa6.46□□□□□ -1.38
HDGFL3-204ENST00000563790 ZNF182P17025 639 aaPredicted RBP6.46□□□□□ -1.38
HDGFL3-204ENST00000563790 DAZ2Q13117 558 aaKnown RBP6.46□□□□□ -1.38
HDGFL3-204ENST00000563790 C14orf177Q52M58 125 aa6.46□□□□□ -1.38
HDGFL3-204ENST00000563790 OR1S1Q8NH92 325 aa6.46□□□□□ -1.38
HDGFL3-204ENST00000563790 RPUSD4Q96CM3 377 aaKnown RBP6.46□□□□□ -1.38
HDGFL3-204ENST00000563790 ZNF331Q9NQX6 463 aaPredicted RBP6.46□□□□□ -1.38
HDGFL3-204ENST00000563790 PLAC8Q9NZF1 115 aa6.46□□□□□ -1.38
HDGFL3-204ENST00000563790 TRAV8-1A0A0A6YYK1 113 aa6.45□□□□□ -1.38
HDGFL3-204ENST00000563790 ANKRD20A5PA0PJZ0 165 aa6.45□□□□□ -1.38
HDGFL3-204ENST00000563790 SLC17A3O00476 420 aa6.45□□□□□ -1.38
HDGFL3-204ENST00000563790 CTDSP2O14595 271 aa6.45□□□□□ -1.38
HDGFL3-204ENST00000563790 SLC25A6P12236 298 aa6.45□□□□□ -1.38
HDGFL3-204ENST00000563790 RPL7P18124 248 aaKnown RBP6.45□□□□□ -1.38
HDGFL3-204ENST00000563790 TIRAPP58753 221 aa6.45□□□□□ -1.38
HDGFL3-204ENST00000563790 TPRXLQ17RH7 258 aa6.45□□□□□ -1.38
HDGFL3-204ENST00000563790 KRTAP19-2Q3LHN2 52 aa6.45□□□□□ -1.38
HDGFL3-204ENST00000563790 C4orf46Q504U0 113 aa6.45□□□□□ -1.38
HDGFL3-204ENST00000563790 DPPA3Q6W0C5 159 aa6.45□□□□□ -1.38
HDGFL3-204ENST00000563790 BPIFCQ8NFQ6 507 aa6.45□□□□□ -1.38
HDGFL3-204ENST00000563790 TRIM63Q969Q1 353 aa6.45□□□□□ -1.38
HDGFL3-204ENST00000563790 TMEM147Q9BVK8 224 aa6.45□□□□□ -1.38
HDGFL3-204ENST00000563790 HHLA3Q9XRX5 114 aa6.45□□□□□ -1.38
HDGFL3-204ENST00000563790 FLGP20930 4061 aaPredicted RBP6.45□□□□□ -1.38
HDGFL3-204ENST00000563790 A0A087WXM4 84 aa6.44□□□□□ -1.38
HDGFL3-204ENST00000563790 DISC1C4P0D8 188 aa6.44□□□□□ -1.38
HDGFL3-204ENST00000563790 K7EPK0 472 aa6.44□□□□□ -1.38
HDGFL3-204ENST00000563790 CTDSPLO15194 276 aa6.44□□□□□ -1.38
HDGFL3-204ENST00000563790 AKAIN1P0CW23 69 aa6.44□□□□□ -1.38
HDGFL3-204ENST00000563790 RHOBP62745 196 aa6.44□□□□□ -1.38
HDGFL3-204ENST00000563790 MRPS10P82664 201 aaKnown RBP6.44□□□□□ -1.38
HDGFL3-204ENST00000563790 FGL1Q08830 312 aa6.44□□□□□ -1.38
HDGFL3-204ENST00000563790 MZT2AQ6P582 158 aa6.44□□□□□ -1.38
HDGFL3-204ENST00000563790 TEPPQ6URK8 271 aa6.44□□□□□ -1.38
HDGFL3-204ENST00000563790 CYP2G1PQ6ZSU1 146 aa6.44□□□□□ -1.38
HDGFL3-204ENST00000563790 C15orf40Q8WUR7 153 aa6.44□□□□□ -1.38
HDGFL3-204ENST00000563790 ANAPC16Q96DE5 110 aa6.44□□□□□ -1.38
HDGFL3-204ENST00000563790 PRRT1Q99946 306 aa6.44□□□□□ -1.38
HDGFL3-204ENST00000563790 DUXBA0A1W2PPF3 345 aa6.43□□□□□ -1.38
HDGFL3-204ENST00000563790 SYNGR2O43760 224 aa6.43□□□□□ -1.38
HDGFL3-204ENST00000563790 CT45A10P0DMU9 189 aa6.43□□□□□ -1.38
HDGFL3-204ENST00000563790 AKR1C4P17516 323 aa6.43□□□□□ -1.38
HDGFL3-204ENST00000563790 RAB11AP62491 216 aa6.43□□□□□ -1.38
HDGFL3-204ENST00000563790 DGAT2L7PQ6IED9 249 aa6.43□□□□□ -1.38
HDGFL3-204ENST00000563790 CLVS1Q8IUQ0 354 aaPredicted RBP6.43□□□□□ -1.38
HDGFL3-204ENST00000563790 ZNF431Q8TF32 576 aaPredicted RBP6.43□□□□□ -1.38
HDGFL3-204ENST00000563790 GTSF1Q8WW33 167 aa6.43□□□□□ -1.38
HDGFL3-204ENST00000563790 SAT2Q96F10 170 aaPredicted RBP6.43□□□□□ -1.38
HDGFL3-204ENST00000563790 C8orf49Q96NF6 230 aa6.43□□□□□ -1.38
HDGFL3-204ENST00000563790 HIGD1AQ9Y241 93 aa6.43□□□□□ -1.38
HDGFL3-204ENST00000563790 KCNIP3Q9Y2W7 256 aa6.43□□□□□ -1.38
HDGFL3-204ENST00000563790 KRTAP4-16G5E9R7 235 aaPredicted RBP6.42□□□□□ -1.38
HDGFL3-204ENST00000563790 H3BP45 60 aa6.42□□□□□ -1.38
HDGFL3-204ENST00000563790 HYPMO75409 117 aa6.42□□□□□ -1.38
HDGFL3-204ENST00000563790 SNRPCP09234 159 aaKnown RBP6.42□□□□□ -1.38
HDGFL3-204ENST00000563790 LINC00869P0C866 280 aa6.42□□□□□ -1.38
HDGFL3-204ENST00000563790 IGLC2P0DOY2 106 aa6.42□□□□□ -1.38
HDGFL3-204ENST00000563790 CXCL2P19875 107 aa6.42□□□□□ -1.38
HDGFL3-204ENST00000563790 SRPXP78539 464 aa6.42□□□□□ -1.38
HDGFL3-204ENST00000563790 DPH3Q96FX2 82 aa6.42□□□□□ -1.38
HDGFL3-204ENST00000563790 FAM19A4Q96LR4 140 aa6.42□□□□□ -1.38
HDGFL3-204ENST00000563790 ODF3Q96PU9 254 aa6.42□□□□□ -1.38
HDGFL3-204ENST00000563790 SOSTQ9BQB4 213 aa6.42□□□□□ -1.38
HDGFL3-204ENST00000563790 TXNDC17Q9BRA2 123 aa6.42□□□□□ -1.38
HDGFL3-204ENST00000563790 GSN-AS1Q9NRJ2 163 aa6.42□□□□□ -1.38
HDGFL3-204ENST00000563790 FUT9Q9Y231 359 aa6.42□□□□□ -1.38
HDGFL3-204ENST00000563790 TRAV8-6A0A0B4J262 113 aa6.41□□□□□ -1.38
HDGFL3-204ENST00000563790 TRAV12-3A0A0B4J271 114 aa6.41□□□□□ -1.38
HDGFL3-204ENST00000563790 KLLNB2CW77 178 aa6.41□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms