RNA–Protein interactions for RNA: ENST00000563683.5

RNF40-204, Transcript of ring finger protein 40, humanhuman

TSL 5 BASIC

Gene RNF40, Length 4,063 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-204ENST00000563683 NEGR1Q7Z3B1 354 aa8.27□□□□□ -1.09
RNF40-204ENST00000563683 GTSF1Q8WW33 167 aa8.27□□□□□ -1.09
RNF40-204ENST00000563683 ZNF747Q9BV97 191 aa8.27□□□□□ -1.09
RNF40-204ENST00000563683 SPCS1Q9Y6A9 102 aa8.27□□□□□ -1.09
RNF40-204ENST00000563683 EVI2AP22794 236 aa8.27□□□□□ -1.09
RNF40-204ENST00000563683 SAA4P35542 130 aa8.27□□□□□ -1.09
RNF40-204ENST00000563683 KIR3DS1Q14943 382 aa8.27□□□□□ -1.09
RNF40-204ENST00000563683 THAP8Q8NA92 274 aa8.27□□□□□ -1.09
RNF40-204ENST00000563683 MLST8Q9BVC4 326 aa8.27□□□□□ -1.09
RNF40-204ENST00000563683 M0R1W7 72 aa8.27□□□□□ -1.09
RNF40-204ENST00000563683 MYCNOSP40205 109 aa8.27□□□□□ -1.09
RNF40-204ENST00000563683 EFNA4P52798 201 aa8.27□□□□□ -1.09
RNF40-204ENST00000563683 TLN2Q9Y4G6 2542 aa8.27□□□□□ -1.09
RNF40-204ENST00000563683 TRBV19A0A075B6N1 114 aa8.26□□□□□ -1.09
RNF40-204ENST00000563683 A0A1B0GW15 77 aa8.26□□□□□ -1.09
RNF40-204ENST00000563683 C19orf71A6NCJ1 209 aa8.26□□□□□ -1.09
RNF40-204ENST00000563683 G3V318 75 aa8.26□□□□□ -1.09
RNF40-204ENST00000563683 SRD5A1P18405 259 aa8.26□□□□□ -1.09
RNF40-204ENST00000563683 AMN1Q8IY45 258 aa8.26□□□□□ -1.09
RNF40-204ENST00000563683 SMKR1H3BMG3 65 aa8.26□□□□□ -1.09
RNF40-204ENST00000563683 LTAP01374 205 aa8.26□□□□□ -1.09
RNF40-204ENST00000563683 PTPRBP23467 1997 aa8.26□□□□□ -1.09
RNF40-204ENST00000563683 FBLL1A6NHQ2 334 aaKnown RBP8.26□□□□□ -1.09
RNF40-204ENST00000563683 GCSHP23434 173 aa8.26□□□□□ -1.09
RNF40-204ENST00000563683 WFDC12Q8WWY7 111 aa8.26□□□□□ -1.09
RNF40-204ENST00000563683 C8orf49Q96NF6 230 aa8.26□□□□□ -1.09
RNF40-204ENST00000563683 SORL1Q92673 2214 aa8.26□□□□□ -1.09
RNF40-204ENST00000563683 WNK1Q9H4A3 2382 aa8.25□□□□□ -1.09
RNF40-204ENST00000563683 J3QR89 54 aa8.25□□□□□ -1.09
RNF40-204ENST00000563683 SCGB1D4Q6XE38 83 aa8.25□□□□□ -1.09
RNF40-204ENST00000563683 TMEM160Q9NX00 188 aa8.25□□□□□ -1.09
RNF40-204ENST00000563683 COL6A3P12111 3177 aa8.25□□□□□ -1.09
RNF40-204ENST00000563683 SH2D1AO60880 128 aa8.25□□□□□ -1.09
RNF40-204ENST00000563683 CACNG7P62955 275 aa8.25□□□□□ -1.09
RNF40-204ENST00000563683 MGAQ8IWI9 3026 aa8.25□□□□□ -1.09
RNF40-204ENST00000563683 A0A1W2PPM0 123 aa8.25□□□□□ -1.09
RNF40-204ENST00000563683 TMEM213A2RRL7 107 aa8.25□□□□□ -1.09
RNF40-204ENST00000563683 SMAD7O15105 426 aaKnown RBP8.25□□□□□ -1.09
RNF40-204ENST00000563683 IGLV2-23P01705 113 aa8.25□□□□□ -1.09
RNF40-204ENST00000563683 ERCC8Q13216 396 aa8.25□□□□□ -1.09
RNF40-204ENST00000563683 MINOS1Q5TGZ0 78 aa8.25□□□□□ -1.09
RNF40-204ENST00000563683 FAM74A4Q5TZK3 123 aa8.25□□□□□ -1.09
RNF40-204ENST00000563683 BOD1L2Q8IYS8 172 aa8.25□□□□□ -1.09
RNF40-204ENST00000563683 NPFFR1Q9GZQ6 430 aa8.25□□□□□ -1.09
RNF40-204ENST00000563683 MINOS1-NBL1R4GNA1 71 aa8.25□□□□□ -1.09
RNF40-204ENST00000563683 INS-IGF2F8WCM5 200 aa8.24□□□□□ -1.09
RNF40-204ENST00000563683 RPL24P83731 157 aaKnown RBP8.24□□□□□ -1.09
RNF40-204ENST00000563683 ZNF491Q8N8L2 437 aa8.24□□□□□ -1.09
RNF40-204ENST00000563683 IGKV1-17P01599 117 aa8.24□□□□□ -1.09
RNF40-204ENST00000563683 LGALS9BQ3B8N2 356 aa8.24□□□□□ -1.09
RNF40-204ENST00000563683 FAM106AQ4KMX7 169 aa8.24□□□□□ -1.09
RNF40-204ENST00000563683 PSMG4Q5JS54 123 aa8.24□□□□□ -1.09
RNF40-204ENST00000563683 LGALS9CQ6DKI2 356 aa8.24□□□□□ -1.09
RNF40-204ENST00000563683 RNF182Q8N6D2 247 aa8.24□□□□□ -1.09
RNF40-204ENST00000563683 ZNF502Q8TBZ5 544 aa8.24□□□□□ -1.09
RNF40-204ENST00000563683 ZC2HC1AQ96GY0 325 aa8.24□□□□□ -1.09
RNF40-204ENST00000563683 JMJD8Q96S16 334 aa8.24□□□□□ -1.09
RNF40-204ENST00000563683 A0A1B0GV72 72 aa8.24□□□□□ -1.09
RNF40-204ENST00000563683 ATP6V0E1O15342 81 aa8.24□□□□□ -1.09
RNF40-204ENST00000563683 SETD2Q9BYW2 2564 aaPredicted RBP8.24□□□□□ -1.09
RNF40-204ENST00000563683 C2CD3Q4AC94 2353 aa8.24□□□□□ -1.09
RNF40-204ENST00000563683 IGLV1-47P01700 117 aa8.24□□□□□ -1.09
RNF40-204ENST00000563683 FGF6P10767 208 aa8.24□□□□□ -1.09
RNF40-204ENST00000563683 ID1P41134 155 aa8.24□□□□□ -1.09
RNF40-204ENST00000563683 PAX8Q06710 450 aa8.24□□□□□ -1.09
RNF40-204ENST00000563683 LINC00322Q6ZN03 302 aaPredicted RBP8.24□□□□□ -1.09
RNF40-204ENST00000563683 SIGMAR1Q99720 223 aa8.24□□□□□ -1.09
RNF40-204ENST00000563683 USP9XQ93008 2570 aaPredicted RBP8.23□□□□□ -1.09
RNF40-204ENST00000563683 NPIPB6E9PJ23 425 aa8.23□□□□□ -1.09
RNF40-204ENST00000563683 SMIM13P0DJ93 91 aa8.23□□□□□ -1.09
RNF40-204ENST00000563683 IFI27P40305 119 aaPredicted RBP8.23□□□□□ -1.09
RNF40-204ENST00000563683 RUSC1-AS1Q66K80 236 aa8.23□□□□□ -1.09
RNF40-204ENST00000563683 LYPD1Q8N2G4 141 aa8.23□□□□□ -1.09
RNF40-204ENST00000563683 DEFB104AQ8WTQ1 72 aa8.23□□□□□ -1.09
RNF40-204ENST00000563683 HIVEP3Q5T1R4 2406 aa8.23□□□□□ -1.09
RNF40-204ENST00000563683 MYO18BQ8IUG5 2567 aa8.23□□□□□ -1.09
RNF40-204ENST00000563683 TRAV41A0A0B4J266 112 aa8.23□□□□□ -1.09
RNF40-204ENST00000563683 NPFFO15130 113 aa8.23□□□□□ -1.09
RNF40-204ENST00000563683 LEPP41159 167 aa8.23□□□□□ -1.09
RNF40-204ENST00000563683 TMEM190Q8WZ59 177 aa8.23□□□□□ -1.09
RNF40-204ENST00000563683 FOXC2Q99958 501 aa8.23□□□□□ -1.09
RNF40-204ENST00000563683 OOSP1A8MZH6 123 aa8.23□□□□□ -1.09
RNF40-204ENST00000563683 TGFAP01135 160 aa8.23□□□□□ -1.09
RNF40-204ENST00000563683 C8orf31Q8N9H6 132 aa8.23□□□□□ -1.09
RNF40-204ENST00000563683 SVIPQ8NHG7 77 aa8.23□□□□□ -1.09
RNF40-204ENST00000563683 SLC50A1Q9BRV3 221 aa8.23□□□□□ -1.09
RNF40-204ENST00000563683 HBDP02042 147 aa8.22□□□□□ -1.09
RNF40-204ENST00000563683 HLA-DMBP28068 263 aa8.22□□□□□ -1.09
RNF40-204ENST00000563683 RNASE4P34096 147 aaKnown RBP8.22□□□□□ -1.09
RNF40-204ENST00000563683 SRSF9Q13242 221 aaKnown RBP eCLIP8.22□□□□□ -1.09
RNF40-204ENST00000563683 SAMD5Q5TGI4 173 aa8.22□□□□□ -1.09
RNF40-204ENST00000563683 H3BUX3 64 aa8.22□□□□□ -1.09
RNF40-204ENST00000563683 SONP18583 2426 aaKnown RBP8.22□□□□□ -1.09
RNF40-204ENST00000563683 NAV2Q8IVL1 2488 aa8.22□□□□□ -1.09
RNF40-204ENST00000563683 IGKV1D-37A0A075B6S9 117 aa8.22□□□□□ -1.09
RNF40-204ENST00000563683 FAM159AQ6UWV7 190 aa8.22□□□□□ -1.09
RNF40-204ENST00000563683 IFI27L1Q96BM0 104 aa8.22□□□□□ -1.09
RNF40-204ENST00000563683 NAA38Q9BRA0 125 aaKnown RBP8.22□□□□□ -1.09
RNF40-204ENST00000563683 SRSF8Q9BRL6 282 aaKnown RBP8.22□□□□□ -1.09
RNF40-204ENST00000563683 H3BVH4 76 aa8.21□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 57.5 ms