RNA–Protein interactions for RNA: ENST00000563149.1

USB1-207, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 2 BASIC

Gene USB1, Length 1,751 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-207ENST00000563149 CDSNQ15517 529 aa10.11□□□□□ -0.79
USB1-207ENST00000563149 AMMECR1LQ6DCA0 310 aa10.11□□□□□ -0.79
USB1-207ENST00000563149 EEF1AKMT3Q96AZ1 226 aa10.11□□□□□ -0.79
USB1-207ENST00000563149 ASPMQ8IZT6 3477 aa10.11□□□□□ -0.79
USB1-207ENST00000563149 TRBV7-1A0A0A6YYK4 115 aa10.11□□□□□ -0.79
USB1-207ENST00000563149 C7orf71A4D174 169 aa10.11□□□□□ -0.79
USB1-207ENST00000563149 PRSS47A8MTI9 375 aa10.11□□□□□ -0.79
USB1-207ENST00000563149 CLEC3BP05452 202 aa10.11□□□□□ -0.79
USB1-207ENST00000563149 IGFL4Q6B9Z1 124 aa10.11□□□□□ -0.79
USB1-207ENST00000563149 BSNQ9UPA5 3926 aa10.11□□□□□ -0.79
USB1-207ENST00000563149 ATP6V0E1O15342 81 aa10.1□□□□□ -0.79
USB1-207ENST00000563149 TNFRSF6BO95407 300 aa10.1□□□□□ -0.79
USB1-207ENST00000563149 ERCC8Q13216 396 aa10.1□□□□□ -0.79
USB1-207ENST00000563149 PRSS57Q6UWY2 283 aa10.1□□□□□ -0.79
USB1-207ENST00000563149 ZMAT4Q9H898 229 aa10.1□□□□□ -0.79
USB1-207ENST00000563149 SMPXQ9UHP9 88 aa10.1□□□□□ -0.79
USB1-207ENST00000563149 BOD1L1Q8NFC6 3051 aa10.1□□□□□ -0.79
USB1-207ENST00000563149 APC2O95996 2303 aa10.1□□□□□ -0.79
USB1-207ENST00000563149 ABCA1O95477 2261 aa10.09□□□□□ -0.79
USB1-207ENST00000563149 CLPSL1A2RUU4 121 aa10.09□□□□□ -0.79
USB1-207ENST00000563149 PRAC2D3DTV9 90 aa10.09□□□□□ -0.79
USB1-207ENST00000563149 ECSCRQ19T08 205 aa10.09□□□□□ -0.79
USB1-207ENST00000563149 TMEM78Q5T7P6 136 aa10.09□□□□□ -0.79
USB1-207ENST00000563149 SMIM15Q7Z3B0 74 aa10.09□□□□□ -0.79
USB1-207ENST00000563149 Q8N8P6 123 aa10.09□□□□□ -0.79
USB1-207ENST00000563149 AJUBAQ96IF1 538 aa10.09□□□□□ -0.79
USB1-207ENST00000563149 MSRB1Q9NZV6 116 aa10.09□□□□□ -0.79
USB1-207ENST00000563149 TRAV8-6A0A0B4J262 113 aa10.09□□□□□ -0.79
USB1-207ENST00000563149 C9orf118A6NHY6 69 aa10.09□□□□□ -0.79
USB1-207ENST00000563149 SNAI2O43623 268 aa10.09□□□□□ -0.79
USB1-207ENST00000563149 ATP5LO75964 103 aa10.09□□□□□ -0.79
USB1-207ENST00000563149 C9orf47Q6ZRZ4 202 aa10.09□□□□□ -0.79
USB1-207ENST00000563149 METTL26Q96S19 204 aa10.09□□□□□ -0.79
USB1-207ENST00000563149 AGPAT4-IT1Q9H0P7 198 aa10.09□□□□□ -0.79
USB1-207ENST00000563149 U3KQE9 123 aa10.09□□□□□ -0.79
USB1-207ENST00000563149 ACACAQ13085 2346 aa10.08□□□□□ -0.8
USB1-207ENST00000563149 MGAQ8IWI9 3026 aa10.08□□□□□ -0.8
USB1-207ENST00000563149 LEPP41159 167 aa10.08□□□□□ -0.8
USB1-207ENST00000563149 PCP4P48539 62 aa10.08□□□□□ -0.8
USB1-207ENST00000563149 FXYD7P58549 80 aa10.08□□□□□ -0.8
USB1-207ENST00000563149 FOXE3Q13461 319 aa10.08□□□□□ -0.8
USB1-207ENST00000563149 CLEC19AQ6UXS0 136 aa10.08□□□□□ -0.8
USB1-207ENST00000563149 ADAMTSL5Q6ZMM2 481 aa10.08□□□□□ -0.8
USB1-207ENST00000563149 IL17RELQ6ZVW7 336 aa10.08□□□□□ -0.8
USB1-207ENST00000563149 CCDC140Q96MF4 163 aa10.08□□□□□ -0.8
USB1-207ENST00000563149 AP1S3Q96PC3 154 aa10.08□□□□□ -0.8
USB1-207ENST00000563149 CST9LQ9H4G1 147 aa10.08□□□□□ -0.8
USB1-207ENST00000563149 LENEPQ9Y5L5 61 aa10.08□□□□□ -0.8
USB1-207ENST00000563149 DMXL1Q9Y485 3027 aa10.08□□□□□ -0.8
USB1-207ENST00000563149 IGHV4-4A0A075B6R2 117 aa10.07□□□□□ -0.8
USB1-207ENST00000563149 IGKV3D-20A0A0C4DH25 116 aa10.07□□□□□ -0.8
USB1-207ENST00000563149 IGHV3-35A0A0C4DH35 117 aa10.07□□□□□ -0.8
USB1-207ENST00000563149 CENPVL3A0A0U1RRI6 287 aa10.07□□□□□ -0.8
USB1-207ENST00000563149 EFNA4P52798 201 aa10.07□□□□□ -0.8
USB1-207ENST00000563149 GTF2H5Q6ZYL4 71 aa10.07□□□□□ -0.8
USB1-207ENST00000563149 ERASQ7Z444 233 aa10.07□□□□□ -0.8
USB1-207ENST00000563149 HIGD1BQ9P298 99 aa10.07□□□□□ -0.8
USB1-207ENST00000563149 AKAP13Q12802 2813 aa10.07□□□□□ -0.8
USB1-207ENST00000563149 CEP250Q9BV73 2442 aa10.07□□□□□ -0.8
USB1-207ENST00000563149 ARHGAP32A7KAX9 2087 aa10.07□□□□□ -0.8
USB1-207ENST00000563149 ZNF292O60281 2723 aa10.07□□□□□ -0.8
USB1-207ENST00000563149 IGLV2-18A0A075B6J9 118 aa10.06□□□□□ -0.8
USB1-207ENST00000563149 TRAV8-2A0A0B4J237 113 aa10.06□□□□□ -0.8
USB1-207ENST00000563149 GAGE10A6NGK3 116 aa10.06□□□□□ -0.8
USB1-207ENST00000563149 HLA-DRB4P13762 266 aa10.06□□□□□ -0.8
USB1-207ENST00000563149 EVI2AP22794 236 aa10.06□□□□□ -0.8
USB1-207ENST00000563149 SAA4P35542 130 aa10.06□□□□□ -0.8
USB1-207ENST00000563149 ODF1Q14990 250 aa10.06□□□□□ -0.8
USB1-207ENST00000563149 RNF182Q8N6D2 247 aa10.06□□□□□ -0.8
USB1-207ENST00000563149 DKK2Q9UBU2 259 aa10.06□□□□□ -0.8
USB1-207ENST00000563149 HLA-DRB4X5D2U9 266 aa10.06□□□□□ -0.8
USB1-207ENST00000563149 SMG1Q96Q15 3661 aaKnown RBP10.06□□□□□ -0.8
USB1-207ENST00000563149 IGHV3OR16-8A0A075B7F1 116 aa10.06□□□□□ -0.8
USB1-207ENST00000563149 OR2K2Q8NGT1 345 aa10.06□□□□□ -0.8
USB1-207ENST00000563149 IGHV7-4-1A0A0J9YVY3 117 aa10.05□□□□□ -0.8
USB1-207ENST00000563149 GAGE12BA1L429 117 aa10.05□□□□□ -0.8
USB1-207ENST00000563149 FAM223BA6NKX1 122 aa10.05□□□□□ -0.8
USB1-207ENST00000563149 IGKCP01834 107 aa10.05□□□□□ -0.8
USB1-207ENST00000563149 PRSS1P07477 247 aa10.05□□□□□ -0.8
USB1-207ENST00000563149 NMUP48645 174 aa10.05□□□□□ -0.8
USB1-207ENST00000563149 CRIP2P52943 208 aaPredicted RBP10.05□□□□□ -0.8
USB1-207ENST00000563149 ATP5G2Q06055 141 aa10.05□□□□□ -0.8
USB1-207ENST00000563149 KIR3DS1Q14943 382 aa10.05□□□□□ -0.8
USB1-207ENST00000563149 OCIAD2Q56VL3 154 aa10.05□□□□□ -0.8
USB1-207ENST00000563149 C8orf86Q6ZUL3 223 aa10.05□□□□□ -0.8
USB1-207ENST00000563149 FAM223AQ8IWN6 122 aa10.05□□□□□ -0.8
USB1-207ENST00000563149 TTC28Q96AY4 2481 aa10.05□□□□□ -0.8
USB1-207ENST00000563149 NPFFO15130 113 aa10.04□□□□□ -0.8
USB1-207ENST00000563149 UQCRFS1P47985 274 aa10.04□□□□□ -0.8
USB1-207ENST00000563149 LMO4P61968 165 aa10.04□□□□□ -0.8
USB1-207ENST00000563149 UFSP1Q6NVU6 142 aa10.04□□□□□ -0.8
USB1-207ENST00000563149 C9orf139Q6ZV77 190 aa10.04□□□□□ -0.8
USB1-207ENST00000563149 C5orf56Q8N8D9 126 aa10.04□□□□□ -0.8
USB1-207ENST00000563149 TMEM158Q8WZ71 300 aa10.04□□□□□ -0.8
USB1-207ENST00000563149 C18orf15Q96N68 181 aa10.04□□□□□ -0.8
USB1-207ENST00000563149 C11orf21Q9P2W6 132 aa10.04□□□□□ -0.8
USB1-207ENST00000563149 HHLA3Q9XRX5 114 aa10.04□□□□□ -0.8
USB1-207ENST00000563149 ANKRD11Q6UB99 2663 aaPredicted RBP10.04□□□□□ -0.8
USB1-207ENST00000563149 G3V318 75 aa10.03□□□□□ -0.8
USB1-207ENST00000563149 DPM2O94777 84 aa10.03□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms