RNA–Protein interactions for RNA: ENST00000561623.5

GTF3C1-202, Transcript of general transcription factor IIIC subunit 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene GTF3C1, Length 7,015 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-202ENST00000561623 TMEM190Q8WZ59 177 aa8.2□□□□□ -1.1
GTF3C1-202ENST00000561623 ABCA1O95477 2261 aa8.2□□□□□ -1.1
GTF3C1-202ENST00000561623 IL15RAQ13261 267 aa8.2□□□□□ -1.1
GTF3C1-202ENST00000561623 LY6G5BQ8NDX9 201 aa8.2□□□□□ -1.1
GTF3C1-202ENST00000561623 RNASE8Q8TDE3 154 aaKnown RBP8.2□□□□□ -1.1
GTF3C1-202ENST00000561623 DKK1O94907 266 aa8.2□□□□□ -1.1
GTF3C1-202ENST00000561623 TRBV20-1A0A075B6N2 111 aa8.2□□□□□ -1.1
GTF3C1-202ENST00000561623 PLA2G2EQ9NZK7 142 aa8.2□□□□□ -1.1
GTF3C1-202ENST00000561623 PRR30Q53SZ7 412 aaPredicted RBP8.19□□□□□ -1.1
GTF3C1-202ENST00000561623 FAM231DQ6ZW35 169 aa8.19□□□□□ -1.1
GTF3C1-202ENST00000561623 PRADC1Q9BSG0 188 aa8.19□□□□□ -1.1
GTF3C1-202ENST00000561623 ZC2HC1AQ96GY0 325 aa8.19□□□□□ -1.1
GTF3C1-202ENST00000561623 NDUFA4L2Q9NRX3 87 aa8.19□□□□□ -1.1
GTF3C1-202ENST00000561623 PCNX1Q96RV3 2341 aa8.19□□□□□ -1.1
GTF3C1-202ENST00000561623 TRBV19A0A075B6N1 114 aa8.19□□□□□ -1.1
GTF3C1-202ENST00000561623 DUX4L9Q6RFH8 374 aaPredicted RBP8.19□□□□□ -1.1
GTF3C1-202ENST00000561623 NTN3O00634 580 aaPredicted RBP8.19□□□□□ -1.1
GTF3C1-202ENST00000561623 HLA-DRB4P13762 266 aa8.19□□□□□ -1.1
GTF3C1-202ENST00000561623 HLA-DRB4X5D2U9 266 aa8.19□□□□□ -1.1
GTF3C1-202ENST00000561623 VWC2LB2RUY7 222 aa8.19□□□□□ -1.1
GTF3C1-202ENST00000561623 TRBV7-1A0A0A6YYK4 115 aa8.19□□□□□ -1.1
GTF3C1-202ENST00000561623 KNCNA6PVL3 124 aa8.19□□□□□ -1.1
GTF3C1-202ENST00000561623 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP8.18□□□□□ -1.1
GTF3C1-202ENST00000561623 WDR86Q86TI4 376 aa8.18□□□□□ -1.1
GTF3C1-202ENST00000561623 RNF5Q99942 180 aa8.18□□□□□ -1.1
GTF3C1-202ENST00000561623 C1QTNF4Q9BXJ3 329 aa8.18□□□□□ -1.1
GTF3C1-202ENST00000561623 HEATR1Q9H583 2144 aaKnown RBP8.18□□□□□ -1.1
GTF3C1-202ENST00000561623 LY6HO94772 140 aa8.18□□□□□ -1.1
GTF3C1-202ENST00000561623 RPL36AP83881 106 aaKnown RBP8.18□□□□□ -1.1
GTF3C1-202ENST00000561623 C6orf226Q5I0X4 101 aa8.18□□□□□ -1.1
GTF3C1-202ENST00000561623 C17orf82Q86X59 251 aaPredicted RBP8.18□□□□□ -1.1
GTF3C1-202ENST00000561623 PCP2Q8IVA1 136 aa8.18□□□□□ -1.1
GTF3C1-202ENST00000561623 RPL36ALQ969Q0 106 aaKnown RBP8.18□□□□□ -1.1
GTF3C1-202ENST00000561623 NDUFS7O75251 213 aa8.18□□□□□ -1.1
GTF3C1-202ENST00000561623 PDE6HQ13956 83 aa8.18□□□□□ -1.1
GTF3C1-202ENST00000561623 OR11H6Q8NGC7 330 aa8.18□□□□□ -1.1
GTF3C1-202ENST00000561623 C12orf74Q32Q52 190 aa8.18□□□□□ -1.1
GTF3C1-202ENST00000561623 SVIPQ8NHG7 77 aa8.18□□□□□ -1.1
GTF3C1-202ENST00000561623 A0A087WX48 190 aa8.17□□□□□ -1.1
GTF3C1-202ENST00000561623 B5MCH6 92 aa8.17□□□□□ -1.1
GTF3C1-202ENST00000561623 HOXD3P31249 432 aaPredicted RBP8.17□□□□□ -1.1
GTF3C1-202ENST00000561623 PMVKQ15126 192 aa8.17□□□□□ -1.1
GTF3C1-202ENST00000561623 RHPN1-AS1Q9BWJ2 59 aa8.17□□□□□ -1.1
GTF3C1-202ENST00000561623 LTBP1Q14766 1721 aa8.17□□□□□ -1.1
GTF3C1-202ENST00000561623 SH2D6Q7Z4S9 175 aa8.17□□□□□ -1.1
GTF3C1-202ENST00000561623 NDUFS5O43920 106 aa8.17□□□□□ -1.1
GTF3C1-202ENST00000561623 RNF166Q96A37 237 aaPredicted RBP8.17□□□□□ -1.1
GTF3C1-202ENST00000561623 UBE2E2Q96LR5 201 aa8.17□□□□□ -1.1
GTF3C1-202ENST00000561623 K7EMI3 77 aa8.17□□□□□ -1.1
GTF3C1-202ENST00000561623 TPSG1Q9NRR2 321 aa8.17□□□□□ -1.1
GTF3C1-202ENST00000561623 RS1O15537 224 aa8.17□□□□□ -1.1
GTF3C1-202ENST00000561623 C11orf52Q96A22 123 aa8.17□□□□□ -1.1
GTF3C1-202ENST00000561623 FXYD5Q96DB9 178 aa8.17□□□□□ -1.1
GTF3C1-202ENST00000561623 OVOL2Q9BRP0 275 aa8.17□□□□□ -1.1
GTF3C1-202ENST00000561623 NBASA2RRP1 2371 aa8.16□□□□□ -1.1
GTF3C1-202ENST00000561623 NCOR1O75376 2440 aa8.16□□□□□ -1.1
GTF3C1-202ENST00000561623 SPTAN1Q13813 2472 aaKnown RBP8.16□□□□□ -1.1
GTF3C1-202ENST00000561623 IGHV2-70DA0A0C4DH43 119 aa8.16□□□□□ -1.1
GTF3C1-202ENST00000561623 ZNF503-AS2A6NEH8 195 aa8.16□□□□□ -1.1
GTF3C1-202ENST00000561623 COL8A2P25067 703 aa8.16□□□□□ -1.1
GTF3C1-202ENST00000561623 NBL1P41271 181 aa8.16□□□□□ -1.1
GTF3C1-202ENST00000561623 LINC00173Q6ZV60 143 aa8.16□□□□□ -1.1
GTF3C1-202ENST00000561623 DEFB125Q8N687 156 aa8.16□□□□□ -1.1
GTF3C1-202ENST00000561623 PRO1854Q9UHT4 67 aa8.16□□□□□ -1.1
GTF3C1-202ENST00000561623 PTPRQQ9UMZ3 2332 aa8.16□□□□□ -1.1
GTF3C1-202ENST00000561623 DOCK9Q9BZ29 2069 aa8.16□□□□□ -1.1
GTF3C1-202ENST00000561623 TEX48A0A1B0GUV7 120 aa8.16□□□□□ -1.1
GTF3C1-202ENST00000561623 RSPO1Q2MKA7 263 aaPredicted RBP8.16□□□□□ -1.1
GTF3C1-202ENST00000561623 TRPT1Q86TN4 253 aaKnown RBP8.16□□□□□ -1.1
GTF3C1-202ENST00000561623 KLK9Q9UKQ9 250 aa8.16□□□□□ -1.1
GTF3C1-202ENST00000561623 H3BUX3 64 aa8.16□□□□□ -1.1
GTF3C1-202ENST00000561623 NDUFB8O95169 186 aa8.16□□□□□ -1.1
GTF3C1-202ENST00000561623 CARD19Q96LW7 228 aa8.16□□□□□ -1.1
GTF3C1-202ENST00000561623 TMEM141Q96I45 108 aa8.15□□□□□ -1.1
GTF3C1-202ENST00000561623 PRR25Q96S07 402 aa8.15□□□□□ -1.1
GTF3C1-202ENST00000561623 IGHV3-16A0A0C4DH30 117 aa8.15□□□□□ -1.1
GTF3C1-202ENST00000561623 ZNF134P52741 427 aa8.15□□□□□ -1.1
GTF3C1-202ENST00000561623 WT1-ASQ06250 92 aa8.15□□□□□ -1.1
GTF3C1-202ENST00000561623 C17orf58Q2M2W7 97 aa8.15□□□□□ -1.1
GTF3C1-202ENST00000561623 COL4A6Q14031 1691 aa8.15□□□□□ -1.1
GTF3C1-202ENST00000561623 MBD3L4A6NDZ8 208 aaPredicted RBP8.15□□□□□ -1.1
GTF3C1-202ENST00000561623 MBD3L3A6NE82 208 aaPredicted RBP8.15□□□□□ -1.1
GTF3C1-202ENST00000561623 MBD3L5A6NJ08 208 aaPredicted RBP8.15□□□□□ -1.1
GTF3C1-202ENST00000561623 MBD3L2Q8NHZ7 208 aaPredicted RBP8.15□□□□□ -1.1
GTF3C1-202ENST00000561623 NTN5Q8WTR8 489 aaPredicted RBP8.15□□□□□ -1.1
GTF3C1-202ENST00000561623 ZNF747Q9BV97 191 aa8.15□□□□□ -1.1
GTF3C1-202ENST00000561623 MUC6Q6W4X9 2439 aa8.15□□□□□ -1.11
GTF3C1-202ENST00000561623 OVOL3O00110 214 aa8.15□□□□□ -1.11
GTF3C1-202ENST00000561623 C15orf53Q8NAA6 179 aa8.15□□□□□ -1.11
GTF3C1-202ENST00000561623 DNAJC30Q96LL9 226 aa8.15□□□□□ -1.11
GTF3C1-202ENST00000561623 F5H768 121 aa8.15□□□□□ -1.11
GTF3C1-202ENST00000561623 SOCS3O14543 225 aa8.15□□□□□ -1.11
GTF3C1-202ENST00000561623 FAM120AOSQ5T036 256 aa8.15□□□□□ -1.11
GTF3C1-202ENST00000561623 DOCK10Q96BY6 2186 aa8.15□□□□□ -1.11
GTF3C1-202ENST00000561623 MINOS1Q5TGZ0 78 aa8.14□□□□□ -1.11
GTF3C1-202ENST00000561623 Q6ZR03 302 aa8.14□□□□□ -1.11
GTF3C1-202ENST00000561623 MDS2Q8NDY4 140 aa8.14□□□□□ -1.11
GTF3C1-202ENST00000561623 MINOS1-NBL1R4GNA1 71 aa8.14□□□□□ -1.11
GTF3C1-202ENST00000561623 SIVA1O15304 175 aa8.14□□□□□ -1.11
GTF3C1-202ENST00000561623 KLF5Q13887 457 aaPredicted RBP8.14□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms