RNA–Protein interactions for RNA: ENST00000561242.1

TPM1-229, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 673 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-229ENST00000561242 EMP1P54849 157 aa7.86□□□□□ -1.15
TPM1-229ENST00000561242 GDF5OSQ5U4N7 250 aa7.86□□□□□ -1.15
TPM1-229ENST00000561242 C9orf62Q8N4C0 152 aa7.86□□□□□ -1.15
TPM1-229ENST00000561242 HIST1H2BAQ96A08 127 aa7.86□□□□□ -1.15
TPM1-229ENST00000561242 ODF3Q96PU9 254 aa7.86□□□□□ -1.15
TPM1-229ENST00000561242 TCEAL7Q9BRU2 100 aa7.86□□□□□ -1.15
TPM1-229ENST00000561242 SLC35B3Q9H1N7 401 aa7.86□□□□□ -1.15
TPM1-229ENST00000561242 GNG13Q9P2W3 67 aa7.86□□□□□ -1.15
TPM1-229ENST00000561242 EPDR1Q9UM22 224 aa7.86□□□□□ -1.15
TPM1-229ENST00000561242 ANK2Q01484 3957 aa7.85□□□□□ -1.15
TPM1-229ENST00000561242 IGKV2-40A0A087WW87 121 aaPredicted RBP7.85□□□□□ -1.15
TPM1-229ENST00000561242 NPIPB6E9PJ23 425 aa7.85□□□□□ -1.15
TPM1-229ENST00000561242 H7BYZ3 331 aa7.85□□□□□ -1.15
TPM1-229ENST00000561242 M0R2Z0 102 aa7.85□□□□□ -1.15
TPM1-229ENST00000561242 IGKV2D-40P01614 121 aaPredicted RBP7.85□□□□□ -1.15
TPM1-229ENST00000561242 AKR1C3P42330 323 aa7.85□□□□□ -1.15
TPM1-229ENST00000561242 NKX2-5P52952 324 aaPredicted RBP7.85□□□□□ -1.15
TPM1-229ENST00000561242 DEFB1P60022 68 aa7.85□□□□□ -1.15
TPM1-229ENST00000561242 ERCC8Q13216 396 aa7.85□□□□□ -1.15
TPM1-229ENST00000561242 C9orf47Q6ZRZ4 202 aa7.85□□□□□ -1.15
TPM1-229ENST00000561242 CYB561D1Q8N8Q1 229 aa7.85□□□□□ -1.15
TPM1-229ENST00000561242 MBD3L1Q8WWY6 194 aa7.85□□□□□ -1.15
TPM1-229ENST00000561242 TXNDC17Q9BRA2 123 aa7.85□□□□□ -1.15
TPM1-229ENST00000561242 ATG101Q9BSB4 218 aa7.85□□□□□ -1.15
TPM1-229ENST00000561242 TREM1Q9NP99 234 aa7.85□□□□□ -1.15
TPM1-229ENST00000561242 LENEPQ9Y5L5 61 aa7.85□□□□□ -1.15
TPM1-229ENST00000561242 TRAV12-2A0A075B6T6 113 aa7.84□□□□□ -1.15
TPM1-229ENST00000561242 TRBV7-9A0A0J9YWB2 115 aa7.84□□□□□ -1.15
TPM1-229ENST00000561242 CBY3A6NI87 242 aa7.84□□□□□ -1.15
TPM1-229ENST00000561242 SNURFLB1AK76 121 aa7.84□□□□□ -1.15
TPM1-229ENST00000561242 PAGE4O60829 102 aa7.84□□□□□ -1.15
TPM1-229ENST00000561242 NMBP08949 121 aa7.84□□□□□ -1.15
TPM1-229ENST00000561242 SPART-AS1P0CW21 52 aa7.84□□□□□ -1.15
TPM1-229ENST00000561242 TAS2R60P59551 318 aa7.84□□□□□ -1.15
TPM1-229ENST00000561242 FAM159AQ6UWV7 190 aa7.84□□□□□ -1.15
TPM1-229ENST00000561242 SSX7Q7RTT5 188 aa7.84□□□□□ -1.15
TPM1-229ENST00000561242 PRNTQ86SH4 94 aa7.84□□□□□ -1.15
TPM1-229ENST00000561242 C11orf45Q8TAV5 145 aa7.84□□□□□ -1.15
TPM1-229ENST00000561242 SUN5Q8TC36 379 aa7.84□□□□□ -1.15
TPM1-229ENST00000561242 AGPAT4-IT1Q9H0P7 198 aa7.84□□□□□ -1.15
TPM1-229ENST00000561242 TMPRSS5Q9H3S3 457 aa7.84□□□□□ -1.15
TPM1-229ENST00000561242 ARL2-SNX15V9GYD0 113 aa7.84□□□□□ -1.15
TPM1-229ENST00000561242 SORL1Q92673 2214 aa7.83□□□□□ -1.16
TPM1-229ENST00000561242 TRAV12-3A0A0B4J271 114 aa7.83□□□□□ -1.16
TPM1-229ENST00000561242 A0A0J9YWU9 116 aa7.83□□□□□ -1.16
TPM1-229ENST00000561242 LOC102723971A0A1B0GUV8 181 aa7.83□□□□□ -1.16
TPM1-229ENST00000561242 C7orf71A4D174 169 aa7.83□□□□□ -1.16
TPM1-229ENST00000561242 C11orf94C9JXX5 98 aa7.83□□□□□ -1.16
TPM1-229ENST00000561242 PRAC2D3DTV9 90 aa7.83□□□□□ -1.16
TPM1-229ENST00000561242 TCRAP04437 139 aa7.83□□□□□ -1.16
TPM1-229ENST00000561242 FHITP49789 147 aa7.83□□□□□ -1.16
TPM1-229ENST00000561242 ALKAL2Q6UX46 152 aa7.83□□□□□ -1.16
TPM1-229ENST00000561242 ZNF503Q96F45 646 aa7.83□□□□□ -1.16
TPM1-229ENST00000561242 PYGO2Q9BRQ0 406 aa7.83□□□□□ -1.16
TPM1-229ENST00000561242 ZNF492Q9P255 531 aa7.83□□□□□ -1.16
TPM1-229ENST00000561242 KLK5Q9Y337 293 aaPredicted RBP7.83□□□□□ -1.16
TPM1-229ENST00000561242 TRAV21A0A0B4J279 112 aa7.82□□□□□ -1.16
TPM1-229ENST00000561242 PEX7O00628 323 aa7.82□□□□□ -1.16
TPM1-229ENST00000561242 PRB4P10163 310 aaPredicted RBP7.82□□□□□ -1.16
TPM1-229ENST00000561242 FLI1Q01543 452 aaPredicted RBP7.82□□□□□ -1.16
TPM1-229ENST00000561242 SMUG1Q53HV7 270 aa7.82□□□□□ -1.16
TPM1-229ENST00000561242 ZNF493Q6ZR52 646 aa7.82□□□□□ -1.16
TPM1-229ENST00000561242 ZNF680Q8NEM1 530 aa7.82□□□□□ -1.16
TPM1-229ENST00000561242 DAZAP1Q96EP5 407 aaKnown RBP7.82□□□□□ -1.16
TPM1-229ENST00000561242 C16orf74Q96GX8 76 aa7.82□□□□□ -1.16
TPM1-229ENST00000561242 FMC1Q96HJ9 113 aa7.82□□□□□ -1.16
TPM1-229ENST00000561242 NEU1Q99519 415 aa7.82□□□□□ -1.16
TPM1-229ENST00000561242 VGLL1Q99990 258 aa7.82□□□□□ -1.16
TPM1-229ENST00000561242 EIF5A2Q9GZV4 153 aaKnown RBP7.82□□□□□ -1.16
TPM1-229ENST00000561242 NAGKQ9UJ70 344 aa7.82□□□□□ -1.16
TPM1-229ENST00000561242 PSG8Q9UQ74 426 aa7.82□□□□□ -1.16
TPM1-229ENST00000561242 IGHV4-28A0A0C4DH34 117 aa7.81□□□□□ -1.16
TPM1-229ENST00000561242 FAM74A7A6NL05 159 aa7.81□□□□□ -1.16
TPM1-229ENST00000561242 C3orf84H3BNL1 204 aa7.81□□□□□ -1.16
TPM1-229ENST00000561242 PDE6DO43924 150 aa7.81□□□□□ -1.16
TPM1-229ENST00000561242 GNG5P63218 68 aa7.81□□□□□ -1.16
TPM1-229ENST00000561242 CD300CQ08708 224 aa7.81□□□□□ -1.16
TPM1-229ENST00000561242 ZNF726P1Q15940 193 aa7.81□□□□□ -1.16
TPM1-229ENST00000561242 TMEM75Q8N9X5 138 aa7.81□□□□□ -1.16
TPM1-229ENST00000561242 KCNS1Q96KK3 526 aa7.81□□□□□ -1.16
TPM1-229ENST00000561242 BIN3Q9NQY0 253 aa7.81□□□□□ -1.16
TPM1-229ENST00000561242 ZFP30Q9Y2G7 519 aa7.81□□□□□ -1.16
TPM1-229ENST00000561242 TIMM8BQ9Y5J9 83 aaPredicted RBP7.81□□□□□ -1.16
TPM1-229ENST00000561242 TRGV11A0A075B6L2 103 aa7.8□□□□□ -1.16
TPM1-229ENST00000561242 TRAV1-1A0A0B4J248 108 aa7.8□□□□□ -1.16
TPM1-229ENST00000561242 ZNF705GA8MUZ8 300 aaPredicted RBP7.8□□□□□ -1.16
TPM1-229ENST00000561242 DEFB4AO15263 64 aa7.8□□□□□ -1.16
TPM1-229ENST00000561242 S100A4P26447 101 aaKnown RBP7.8□□□□□ -1.16
TPM1-229ENST00000561242 DAD1P61803 113 aa7.8□□□□□ -1.16
TPM1-229ENST00000561242 PMS2P11Q13670 270 aa7.8□□□□□ -1.16
TPM1-229ENST00000561242 EIF4E3Q8N5X7 224 aaKnown RBP7.8□□□□□ -1.16
TPM1-229ENST00000561242 MUC7Q8TAX7 377 aa7.8□□□□□ -1.16
TPM1-229ENST00000561242 C11orf68Q9H3H3 251 aaKnown RBP7.8□□□□□ -1.16
TPM1-229ENST00000561242 SDF2L1Q9HCN8 221 aa7.8□□□□□ -1.16
TPM1-229ENST00000561242 MED9Q9NWA0 146 aa7.8□□□□□ -1.16
TPM1-229ENST00000561242 VAX2Q9UIW0 290 aa7.8□□□□□ -1.16
TPM1-229ENST00000561242 TRRAPQ9Y4A5 3859 aa7.79□□□□□ -1.16
TPM1-229ENST00000561242 CEBPGP53567 150 aa7.79□□□□□ -1.16
TPM1-229ENST00000561242 GFI1BQ5VTD9 330 aa7.79□□□□□ -1.16
TPM1-229ENST00000561242 AMTNQ6UX39 209 aa7.79□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms