RNA–Protein interactions for RNA: ENST00000560402.1

SMAD3-214, Transcript of SMAD family member 3, humanhuman

TSL 4

Gene SMAD3, Length 590 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-214ENST00000560402 ZNF414Q96IQ9 312 aa9.98□□□□□ -0.81
SMAD3-214ENST00000560402 SHANK2-AS3Q9BTD1 123 aa9.98□□□□□ -0.81
SMAD3-214ENST00000560402 SLC25A39Q9BZJ4 359 aaPredicted RBP9.98□□□□□ -0.81
SMAD3-214ENST00000560402 CSTL1Q9H114 145 aa9.98□□□□□ -0.81
SMAD3-214ENST00000560402 FRAS1Q86XX4 4008 aa9.98□□□□□ -0.81
SMAD3-214ENST00000560402 TRAV2A0A0B4J234 112 aa9.97□□□□□ -0.81
SMAD3-214ENST00000560402 TRAV5A0A0B4J249 113 aa9.97□□□□□ -0.81
SMAD3-214ENST00000560402 HELTA6NFD8 242 aa9.97□□□□□ -0.81
SMAD3-214ENST00000560402 GNG4P50150 75 aa9.97□□□□□ -0.81
SMAD3-214ENST00000560402 RAB5BP61020 215 aa9.97□□□□□ -0.81
SMAD3-214ENST00000560402 SUMO1P63165 101 aaKnown RBP9.97□□□□□ -0.81
SMAD3-214ENST00000560402 APRG1Q8IVJ8 170 aa9.97□□□□□ -0.81
SMAD3-214ENST00000560402 PHLDA1Q8WV24 401 aaPredicted RBP9.97□□□□□ -0.81
SMAD3-214ENST00000560402 ZNF503Q96F45 646 aa9.97□□□□□ -0.81
SMAD3-214ENST00000560402 C1orf196B1AJZ1 125 aa9.96□□□□□ -0.82
SMAD3-214ENST00000560402 H3BRN7 92 aa9.96□□□□□ -0.82
SMAD3-214ENST00000560402 NBEAP1P0C6P0 100 aa9.96□□□□□ -0.82
SMAD3-214ENST00000560402 PYYP10082 97 aa9.96□□□□□ -0.82
SMAD3-214ENST00000560402 HIST1H1EP10412 219 aaKnown RBP9.96□□□□□ -0.82
SMAD3-214ENST00000560402 TAS2R60P59551 318 aa9.96□□□□□ -0.82
SMAD3-214ENST00000560402 TCF24Q7RTU0 167 aa9.96□□□□□ -0.82
SMAD3-214ENST00000560402 FXYD5Q96DB9 178 aa9.96□□□□□ -0.82
SMAD3-214ENST00000560402 RABAC1Q9UI14 185 aa9.96□□□□□ -0.82
SMAD3-214ENST00000560402 COLCA2A8K830 154 aa9.95□□□□□ -0.82
SMAD3-214ENST00000560402 PEX7O00628 323 aa9.95□□□□□ -0.82
SMAD3-214ENST00000560402 RPL7P18124 248 aaKnown RBP9.95□□□□□ -0.82
SMAD3-214ENST00000560402 RAB5AP20339 215 aa9.95□□□□□ -0.82
SMAD3-214ENST00000560402 CRYBB3P26998 211 aa9.95□□□□□ -0.82
SMAD3-214ENST00000560402 RPL35P42766 123 aaKnown RBP9.95□□□□□ -0.82
SMAD3-214ENST00000560402 TFPI2P48307 235 aa9.95□□□□□ -0.82
SMAD3-214ENST00000560402 RPL19P84098 196 aaKnown RBP9.95□□□□□ -0.82
SMAD3-214ENST00000560402 FLI1Q01543 452 aaPredicted RBP9.95□□□□□ -0.82
SMAD3-214ENST00000560402 MORN5Q5VZ52 161 aa9.95□□□□□ -0.82
SMAD3-214ENST00000560402 LGALS9CQ6DKI2 356 aa9.95□□□□□ -0.82
SMAD3-214ENST00000560402 LINC01551Q86U37 167 aa9.95□□□□□ -0.82
SMAD3-214ENST00000560402 FAM24BQ8N5W8 94 aa9.95□□□□□ -0.82
SMAD3-214ENST00000560402 C5orf17Q8NAS9 161 aa9.95□□□□□ -0.82
SMAD3-214ENST00000560402 CMTM2Q8TAZ6 248 aa9.95□□□□□ -0.82
SMAD3-214ENST00000560402 ISOC2Q96AB3 205 aa9.95□□□□□ -0.82
SMAD3-214ENST00000560402 BIN3Q9NQY0 253 aa9.95□□□□□ -0.82
SMAD3-214ENST00000560402 OTORQ9NRC9 128 aa9.95□□□□□ -0.82
SMAD3-214ENST00000560402 IGKV3-7A0A075B6H7 116 aa9.94□□□□□ -0.82
SMAD3-214ENST00000560402 IGHV3-49A0A0A0MS15 119 aa9.94□□□□□ -0.82
SMAD3-214ENST00000560402 GGTLC3B5MD39 225 aa9.94□□□□□ -0.82
SMAD3-214ENST00000560402 K7EQM0 130 aa9.94□□□□□ -0.82
SMAD3-214ENST00000560402 SLC25A5P05141 298 aaKnown RBP9.94□□□□□ -0.82
SMAD3-214ENST00000560402 NPPCP23582 126 aa9.94□□□□□ -0.82
SMAD3-214ENST00000560402 TCTAP57738 103 aa9.94□□□□□ -0.82
SMAD3-214ENST00000560402 UBE2G1P62253 170 aa9.94□□□□□ -0.82
SMAD3-214ENST00000560402 TOMM20LQ6UXN7 152 aa9.94□□□□□ -0.82
SMAD3-214ENST00000560402 LYPD1Q8N2G4 141 aa9.94□□□□□ -0.82
SMAD3-214ENST00000560402 BLNKQ8WV28 456 aa9.94□□□□□ -0.82
SMAD3-214ENST00000560402 GPR82Q96P67 336 aa9.94□□□□□ -0.82
SMAD3-214ENST00000560402 ZFAND3Q9H8U3 227 aa9.94□□□□□ -0.82
SMAD3-214ENST00000560402 A0A1W2PS18 150 aa9.93□□□□□ -0.82
SMAD3-214ENST00000560402 CA1P00915 261 aaPredicted RBP9.93□□□□□ -0.82
SMAD3-214ENST00000560402 GALR1P47211 349 aa9.93□□□□□ -0.82
SMAD3-214ENST00000560402 RANP62826 216 aaKnown RBP9.93□□□□□ -0.82
SMAD3-214ENST00000560402 PDE6HQ13956 83 aa9.93□□□□□ -0.82
SMAD3-214ENST00000560402 ZNF124Q15973 351 aa9.93□□□□□ -0.82
SMAD3-214ENST00000560402 CENPWQ5EE01 88 aa9.93□□□□□ -0.82
SMAD3-214ENST00000560402 OR11H2Q8NH07 326 aa9.93□□□□□ -0.82
SMAD3-214ENST00000560402 C11orf45Q8TAV5 145 aa9.93□□□□□ -0.82
SMAD3-214ENST00000560402 SMIM12Q96EX1 92 aa9.93□□□□□ -0.82
SMAD3-214ENST00000560402 IMMP2LQ96T52 175 aa9.93□□□□□ -0.82
SMAD3-214ENST00000560402 DERL1Q9BUN8 251 aa9.93□□□□□ -0.82
SMAD3-214ENST00000560402 AAMDCQ9H7C9 122 aa9.93□□□□□ -0.82
SMAD3-214ENST00000560402 DNAH6Q9C0G6 4158 aa9.93□□□□□ -0.82
SMAD3-214ENST00000560402 IGHV3OR16-13A0A075B7E8 117 aa9.92□□□□□ -0.82
SMAD3-214ENST00000560402 IGHV3-74A0A0B4J1X5 117 aa9.92□□□□□ -0.82
SMAD3-214ENST00000560402 PGPA6NDG6 321 aa9.92□□□□□ -0.82
SMAD3-214ENST00000560402 ZNF98A6NK75 572 aa9.92□□□□□ -0.82
SMAD3-214ENST00000560402 PSG9Q00887 426 aa9.92□□□□□ -0.82
SMAD3-214ENST00000560402 GBGT1Q8N5D6 347 aa9.92□□□□□ -0.82
SMAD3-214ENST00000560402 OR10G8Q8NGN5 311 aa9.92□□□□□ -0.82
SMAD3-214ENST00000560402 C2CD4CQ8TF44 421 aa9.92□□□□□ -0.82
SMAD3-214ENST00000560402 SFRP2Q96HF1 295 aa9.92□□□□□ -0.82
SMAD3-214ENST00000560402 ATG101Q9BSB4 218 aa9.92□□□□□ -0.82
SMAD3-214ENST00000560402 MS4A6AQ9H2W1 248 aa9.92□□□□□ -0.82
SMAD3-214ENST00000560402 Q9H3A6 140 aa9.92□□□□□ -0.82
SMAD3-214ENST00000560402 EPDR1Q9UM22 224 aa9.92□□□□□ -0.82
SMAD3-214ENST00000560402 SERTM2A0A1B0GWG4 89 aa9.91□□□□□ -0.82
SMAD3-214ENST00000560402 RPS10P46783 165 aaKnown RBP9.91□□□□□ -0.82
SMAD3-214ENST00000560402 CSN1S1P47710 185 aa9.91□□□□□ -0.82
SMAD3-214ENST00000560402 MEOX2P50222 304 aa9.91□□□□□ -0.82
SMAD3-214ENST00000560402 DEFB131AP59861 70 aa9.91□□□□□ -0.82
SMAD3-214ENST00000560402 ELOBQ15370 118 aa9.91□□□□□ -0.82
SMAD3-214ENST00000560402 USF2Q15853 346 aaPredicted RBP9.91□□□□□ -0.82
SMAD3-214ENST00000560402 LEMD1Q68G75 181 aa9.91□□□□□ -0.82
SMAD3-214ENST00000560402 STHQ8IWL8 128 aa9.91□□□□□ -0.82
SMAD3-214ENST00000560402 OR8I2Q8N0Y5 310 aa9.91□□□□□ -0.82
SMAD3-214ENST00000560402 GRAMD2BQ96HH9 432 aa9.91□□□□□ -0.82
SMAD3-214ENST00000560402 FMC1Q96HJ9 113 aa9.91□□□□□ -0.82
SMAD3-214ENST00000560402 FAM210BQ96KR6 192 aa9.91□□□□□ -0.82
SMAD3-214ENST00000560402 METTL26Q96S19 204 aa9.91□□□□□ -0.82
SMAD3-214ENST00000560402 URGCP-MRPS24S4R325 110 aa9.91□□□□□ -0.82
SMAD3-214ENST00000560402 TRBV24-1A0A075B6N3 115 aa9.9□□□□□ -0.82
SMAD3-214ENST00000560402 TRAV9-1A0A075B6T8 112 aa9.9□□□□□ -0.82
SMAD3-214ENST00000560402 S100A6P06703 90 aa9.9□□□□□ -0.82
SMAD3-214ENST00000560402 NANOS2P60321 138 aaKnown RBP9.9□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms