RNA–Protein interactions for RNA: ENST00000559754.1

SPG11-218, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 5

Gene SPG11, Length 411 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-218ENST00000559754 SMG6Q86US8 1419 aaKnown RBP1.71□□□□□ -2.14
SPG11-218ENST00000559754 ADGRB3O60242 1522 aa1.71□□□□□ -2.14
SPG11-218ENST00000559754 PXDNLA1KZ92 1463 aa1.7□□□□□ -2.14
SPG11-218ENST00000559754 BCL9LQ86UU0 1499 aa1.7□□□□□ -2.14
SPG11-218ENST00000559754 WDR97A6NE52 1622 aa1.7□□□□□ -2.14
SPG11-218ENST00000559754 KIDINS220Q9ULH0 1771 aa1.7□□□□□ -2.14
SPG11-218ENST00000559754 MDC1Q14676 2089 aaKnown RBP1.7□□□□□ -2.14
SPG11-218ENST00000559754 PNMA8CA0A1B0GUJ8 204 aa1.7□□□□□ -2.14
SPG11-218ENST00000559754 TCRBV4S1A1TA0A5B7 111 aa1.7□□□□□ -2.14
SPG11-218ENST00000559754 FAM92AA1XBS5 289 aa1.7□□□□□ -2.14
SPG11-218ENST00000559754 MIF4GDA9UHW6 222 aaKnown RBP1.7□□□□□ -2.14
SPG11-218ENST00000559754 NPFFO15130 113 aa1.7□□□□□ -2.14
SPG11-218ENST00000559754 TRACP01848 142 aa1.7□□□□□ -2.14
SPG11-218ENST00000559754 SLC25A4P12235 298 aa1.7□□□□□ -2.14
SPG11-218ENST00000559754 S100A1P23297 94 aa1.7□□□□□ -2.14
SPG11-218ENST00000559754 PTPRGP23470 1445 aa1.7□□□□□ -2.14
SPG11-218ENST00000559754 BLCAPP62952 87 aa1.7□□□□□ -2.14
SPG11-218ENST00000559754 CIRBPQ14011 172 aaKnown RBP1.7□□□□□ -2.14
SPG11-218ENST00000559754 WHAMMP3Q1A5X7 153 aa1.7□□□□□ -2.14
SPG11-218ENST00000559754 DEFB113Q30KQ7 82 aa1.7□□□□□ -2.14
SPG11-218ENST00000559754 GLIPR1L1Q6UWM5 242 aa1.7□□□□□ -2.14
SPG11-218ENST00000559754 C2orf82Q6UX34 121 aa1.7□□□□□ -2.14
SPG11-218ENST00000559754 OR5AK2Q8NH90 309 aa1.7□□□□□ -2.14
SPG11-218ENST00000559754 PSMF1Q92530 271 aa1.7□□□□□ -2.14
SPG11-218ENST00000559754 TXNDC17Q9BRA2 123 aa1.7□□□□□ -2.14
SPG11-218ENST00000559754 SIPA1L2Q9P2F8 1722 aaPredicted RBP1.7□□□□□ -2.14
SPG11-218ENST00000559754 COMMD3Q9UBI1 195 aa1.7□□□□□ -2.14
SPG11-218ENST00000559754 METTL1Q9UBP6 276 aaKnown RBP1.7□□□□□ -2.14
SPG11-218ENST00000559754 ZFHX2Q9C0A1 2572 aaPredicted RBP1.7□□□□□ -2.14
SPG11-218ENST00000559754 KIAA1549LQ6ZVL6 1849 aa1.7□□□□□ -2.14
SPG11-218ENST00000559754 TMEM2Q9UHN6 1383 aa1.7□□□□□ -2.14
SPG11-218ENST00000559754 HEATR5BQ9P2D3 2071 aa1.7□□□□□ -2.14
SPG11-218ENST00000559754 MGAMO43451 1857 aa1.69□□□□□ -2.14
SPG11-218ENST00000559754 CUL9Q8IWT3 2517 aa1.69□□□□□ -2.14
SPG11-218ENST00000559754 PCDH15Q96QU1 1955 aa1.69□□□□□ -2.14
SPG11-218ENST00000559754 COL5A1P20908 1838 aaPredicted RBP1.69□□□□□ -2.14
SPG11-218ENST00000559754 TRAV10A0A0B4J240 114 aa1.69□□□□□ -2.14
SPG11-218ENST00000559754 ZNF670-ZNF695F2Z2N8 137 aa1.69□□□□□ -2.14
SPG11-218ENST00000559754 YPEL1O60688 119 aa1.69□□□□□ -2.14
SPG11-218ENST00000559754 ERC2-IT1O76042 136 aa1.69□□□□□ -2.14
SPG11-218ENST00000559754 ETV6P41212 452 aa1.69□□□□□ -2.14
SPG11-218ENST00000559754 KRTAP12-3P60328 96 aa1.69□□□□□ -2.14
SPG11-218ENST00000559754 SNRPD3P62318 126 aaKnown RBP1.69□□□□□ -2.14
SPG11-218ENST00000559754 BRD3OSQ6XYD6 125 aa1.69□□□□□ -2.14
SPG11-218ENST00000559754 RPS19BP1Q86WX3 136 aaKnown RBP1.69□□□□□ -2.14
SPG11-218ENST00000559754 TMEM203Q969S6 136 aa1.69□□□□□ -2.14
SPG11-218ENST00000559754 NABP2Q9BQ15 211 aa1.69□□□□□ -2.14
SPG11-218ENST00000559754 TMEM191AQ9H0A3 160 aa1.69□□□□□ -2.14
SPG11-218ENST00000559754 FKBP11Q9NYL4 201 aa1.69□□□□□ -2.14
SPG11-218ENST00000559754 DNAJC15Q9Y5T4 150 aa1.69□□□□□ -2.14
SPG11-218ENST00000559754 CEP192Q8TEP8 1941 aa1.69□□□□□ -2.14
SPG11-218ENST00000559754 FAM135AQ9P2D6 1515 aa1.69□□□□□ -2.14
SPG11-218ENST00000559754 RP1P56715 2156 aa1.69□□□□□ -2.14
SPG11-218ENST00000559754 ROCK2O75116 1388 aaKnown RBP1.69□□□□□ -2.14
SPG11-218ENST00000559754 HELZP42694 1942 aaKnown RBP1.68□□□□□ -2.14
SPG11-218ENST00000559754 FAM236AA0A1B0GUQ0 79 aa1.68□□□□□ -2.14
SPG11-218ENST00000559754 FAM236BA0A1B0GV22 79 aa1.68□□□□□ -2.14
SPG11-218ENST00000559754 GNG7O60262 68 aa1.68□□□□□ -2.14
SPG11-218ENST00000559754 BRS3P32247 399 aa1.68□□□□□ -2.14
SPG11-218ENST00000559754 PLGLB1Q02325 96 aa1.68□□□□□ -2.14
SPG11-218ENST00000559754 NEDD8Q15843 81 aa1.68□□□□□ -2.14
SPG11-218ENST00000559754 OR5AS1Q8N127 324 aa1.68□□□□□ -2.14
SPG11-218ENST00000559754 LINC00269Q8N2A0 174 aa1.68□□□□□ -2.14
SPG11-218ENST00000559754 C4orf3Q8WVX3 66 aa1.68□□□□□ -2.14
SPG11-218ENST00000559754 Q96M85 177 aa1.68□□□□□ -2.14
SPG11-218ENST00000559754 CST11Q9H112 138 aa1.68□□□□□ -2.14
SPG11-218ENST00000559754 SLC35B3Q9H1N7 401 aa1.68□□□□□ -2.14
SPG11-218ENST00000559754 CHCHD2Q9Y6H1 151 aaPredicted RBP1.68□□□□□ -2.14
SPG11-218ENST00000559754 BRWD1Q9NSI6 2320 aa1.68□□□□□ -2.14
SPG11-218ENST00000559754 ZNF518AQ6AHZ1 1483 aa1.68□□□□□ -2.14
SPG11-218ENST00000559754 KIF13AQ9H1H9 1805 aa1.68□□□□□ -2.14
SPG11-218ENST00000559754 PTPRFP10586 1907 aa1.68□□□□□ -2.14
SPG11-218ENST00000559754 ATG2AQ2TAZ0 1938 aa1.68□□□□□ -2.14
SPG11-218ENST00000559754 TRAV14DV4A0A0A6YYC5 116 aa1.67□□□□□ -2.14
SPG11-218ENST00000559754 C5orf67F2Z3F1 127 aa1.67□□□□□ -2.14
SPG11-218ENST00000559754 RBP4P02753 201 aa1.67□□□□□ -2.14
SPG11-218ENST00000559754 CD3DP04234 171 aa1.67□□□□□ -2.14
SPG11-218ENST00000559754 CD14P08571 375 aa1.67□□□□□ -2.14
SPG11-218ENST00000559754 CXCL8P10145 99 aa1.67□□□□□ -2.14
SPG11-218ENST00000559754 CKS2P33552 79 aa1.67□□□□□ -2.14
SPG11-218ENST00000559754 PCBD1P61457 104 aa1.67□□□□□ -2.14
SPG11-218ENST00000559754 C1orf137Q5JT78 98 aa1.67□□□□□ -2.14
SPG11-218ENST00000559754 KRTAP26-1Q6PEX3 210 aa1.67□□□□□ -2.14
SPG11-218ENST00000559754 ZNF833PQ6ZTB9 187 aa1.67□□□□□ -2.14
SPG11-218ENST00000559754 ATOH7Q8N100 152 aa1.67□□□□□ -2.14
SPG11-218ENST00000559754 C10orf111Q8N326 155 aa1.67□□□□□ -2.14
SPG11-218ENST00000559754 ZNF431Q8TF32 576 aaPredicted RBP1.67□□□□□ -2.14
SPG11-218ENST00000559754 GGACTQ9BVM4 153 aa1.67□□□□□ -2.14
SPG11-218ENST00000559754 CCDC167Q9P0B6 97 aa1.67□□□□□ -2.14
SPG11-218ENST00000559754 IBTKQ9P2D0 1353 aaPredicted RBP1.67□□□□□ -2.14
SPG11-218ENST00000559754 MED12LQ86YW9 2145 aa1.67□□□□□ -2.14
SPG11-218ENST00000559754 LAMB4A4D0S4 1761 aa1.67□□□□□ -2.14
SPG11-218ENST00000559754 RGS12O14924 1447 aa1.66□□□□□ -2.14
SPG11-218ENST00000559754 TRBV20-1A0A075B6N2 111 aa1.66□□□□□ -2.14
SPG11-218ENST00000559754 FAM25AB3EWG3 89 aa1.66□□□□□ -2.14
SPG11-218ENST00000559754 FAM25CB3EWG5 89 aa1.66□□□□□ -2.14
SPG11-218ENST00000559754 FAM25GB3EWG6 89 aa1.66□□□□□ -2.14
SPG11-218ENST00000559754 IGF2P01344 180 aa1.66□□□□□ -2.14
SPG11-218ENST00000559754 IFNGP01579 166 aa1.66□□□□□ -2.14
SPG11-218ENST00000559754 GUCA1AP43080 201 aaPredicted RBP1.66□□□□□ -2.14
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms