RNA–Protein interactions for RNA: ENST00000558768.5

TRPM1-208, Transcript of transient receptor potential cation channel subfamily M member 1, human

APPRIS ALT2 TSL 1 (best)

Gene TRPM1, Length 4,581 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TRPM1-208	ENST00000558768	SCRT2	Q9NQ03	307 aa		7.84	□□□□□ -1.15
TRPM1-208	ENST00000558768	IGLV3-32	A0A0A0MS00	114 aa		7.83	□□□□□ -1.16
TRPM1-208	ENST00000558768	TRBV6-6	A0A0A6YYG2	114 aa		7.83	□□□□□ -1.16
TRPM1-208	ENST00000558768	C15orf62	A8K5M9	175 aa		7.83	□□□□□ -1.16
TRPM1-208	ENST00000558768	HOXD3	P31249	432 aa	Predicted RBP	7.83	□□□□□ -1.16
TRPM1-208	ENST00000558768	ZNF493	Q6ZR52	646 aa		7.83	□□□□□ -1.16
TRPM1-208	ENST00000558768	LRRC75A-AS1	Q8N1F1	130 aa		7.83	□□□□□ -1.16
TRPM1-208	ENST00000558768	C8orf31	Q8N9H6	132 aa		7.83	□□□□□ -1.16
TRPM1-208	ENST00000558768	BAALC	Q8WXS3	180 aa		7.83	□□□□□ -1.16
TRPM1-208	ENST00000558768	CYYR1	Q96J86	154 aa		7.83	□□□□□ -1.16
TRPM1-208	ENST00000558768	RPP25	Q9BUL9	199 aa	Known RBP	7.83	□□□□□ -1.16
TRPM1-208	ENST00000558768	ZDBF2	Q9HCK1	2354 aa		7.83	□□□□□ -1.16
TRPM1-208	ENST00000558768	IGHV3OR16-8	A0A075B7F1	116 aa		7.83	□□□□□ -1.16
TRPM1-208	ENST00000558768	MP68	P56378	58 aa		7.83	□□□□□ -1.16
TRPM1-208	ENST00000558768	ZNF329	Q86UD4	541 aa		7.83	□□□□□ -1.16
TRPM1-208	ENST00000558768	GLMP	Q8WWB7	406 aa		7.83	□□□□□ -1.16
TRPM1-208	ENST00000558768	SAA2	P0DJI9	122 aa	Predicted RBP	7.83	□□□□□ -1.16
TRPM1-208	ENST00000558768	ERCC8	Q13216	396 aa		7.83	□□□□□ -1.16
TRPM1-208	ENST00000558768	ZNF784	Q8NCA9	323 aa	Predicted RBP	7.83	□□□□□ -1.16
TRPM1-208	ENST00000558768	WIPF2	Q8TF74	440 aa	Predicted RBP	7.83	□□□□□ -1.16
TRPM1-208	ENST00000558768	DKK2	Q9UBU2	259 aa		7.83	□□□□□ -1.16
TRPM1-208	ENST00000558768	LINC00312	Q9Y6C7	94 aa		7.83	□□□□□ -1.16
TRPM1-208	ENST00000558768	WISP1	O95388	367 aa		7.83	□□□□□ -1.16
TRPM1-208	ENST00000558768	MT-ATP8	P03928	68 aa		7.83	□□□□□ -1.16
TRPM1-208	ENST00000558768	MRPL51	Q4U2R6	128 aa	Known RBP	7.83	□□□□□ -1.16
TRPM1-208	ENST00000558768	C3orf22	Q8N5N4	141 aa		7.83	□□□□□ -1.16
TRPM1-208	ENST00000558768	SRCAP	Q6ZRS2	3230 aa		7.82	□□□□□ -1.16
TRPM1-208	ENST00000558768	TRBV19	A0A075B6N1	114 aa		7.82	□□□□□ -1.16
TRPM1-208	ENST00000558768	RHOD	O00212	210 aa		7.82	□□□□□ -1.16
TRPM1-208	ENST00000558768	PRB4	P10163	310 aa	Predicted RBP	7.82	□□□□□ -1.16
TRPM1-208	ENST00000558768	MYOD1	P15172	320 aa		7.82	□□□□□ -1.16
TRPM1-208	ENST00000558768	FXYD2	P54710	66 aa		7.82	□□□□□ -1.16
TRPM1-208	ENST00000558768	PDE6H	Q13956	83 aa		7.82	□□□□□ -1.16
TRPM1-208	ENST00000558768	ZNF501	Q96CX3	271 aa	Predicted RBP	7.82	□□□□□ -1.16
TRPM1-208	ENST00000558768	LINC00477	Q96M19	166 aa		7.82	□□□□□ -1.16
TRPM1-208	ENST00000558768	TNRC6A	Q8NDV7	1962 aa	Known RBP	7.82	□□□□□ -1.16
TRPM1-208	ENST00000558768	TRBV10-2	A0A0K0K1G8	114 aa		7.82	□□□□□ -1.16
TRPM1-208	ENST00000558768	TMEM213	A2RRL7	107 aa		7.82	□□□□□ -1.16
TRPM1-208	ENST00000558768	THBD	P07204	575 aa		7.82	□□□□□ -1.16
TRPM1-208	ENST00000558768	CLEC19A	Q6UXS0	136 aa		7.82	□□□□□ -1.16
TRPM1-208	ENST00000558768	TMEM167A	Q8TBQ9	72 aa		7.82	□□□□□ -1.16
TRPM1-208	ENST00000558768	IGHV3-23	P01764	117 aa		7.82	□□□□□ -1.16
TRPM1-208	ENST00000558768	TFF2	Q03403	129 aa		7.82	□□□□□ -1.16
TRPM1-208	ENST00000558768	C5orf64	Q2M2E5	130 aa		7.82	□□□□□ -1.16
TRPM1-208	ENST00000558768	HS3ST6	Q96QI5	342 aa		7.82	□□□□□ -1.16
TRPM1-208	ENST00000558768	SMIM9	A6NGZ8	99 aa		7.81	□□□□□ -1.16
TRPM1-208	ENST00000558768		H0YJW9	148 aa		7.81	□□□□□ -1.16
TRPM1-208	ENST00000558768	FOXF2	Q12947	444 aa		7.81	□□□□□ -1.16
TRPM1-208	ENST00000558768	FOXL2NB	Q6ZUU3	175 aa		7.81	□□□□□ -1.16
TRPM1-208	ENST00000558768	C9orf139	Q6ZV77	190 aa		7.81	□□□□□ -1.16
TRPM1-208	ENST00000558768	ZNF837	Q96EG3	531 aa	Predicted RBP	7.81	□□□□□ -1.16
TRPM1-208	ENST00000558768	ORMDL1	Q9P0S3	153 aa		7.81	□□□□□ -1.16
TRPM1-208	ENST00000558768	NDUFB8	O95169	186 aa		7.81	□□□□□ -1.16
TRPM1-208	ENST00000558768	ATP5J2	P56134	94 aa		7.81	□□□□□ -1.16
TRPM1-208	ENST00000558768	IGKV1-6	A0A0C4DH72	117 aa		7.81	□□□□□ -1.16
TRPM1-208	ENST00000558768	NTN3	O00634	580 aa	Predicted RBP	7.81	□□□□□ -1.16
TRPM1-208	ENST00000558768	IGF2-AS	Q6U949	168 aa		7.81	□□□□□ -1.16
TRPM1-208	ENST00000558768	DCTN5	Q9BTE1	182 aa		7.81	□□□□□ -1.16
TRPM1-208	ENST00000558768	SMIM2	Q9BVW6	85 aa		7.81	□□□□□ -1.16
TRPM1-208	ENST00000558768	MYO7B	Q6PIF6	2116 aa		7.81	□□□□□ -1.16
TRPM1-208	ENST00000558768	ROS1	P08922	2347 aa		7.81	□□□□□ -1.16
TRPM1-208	ENST00000558768	TRGV4	A0A0C4DH28	118 aa		7.81	□□□□□ -1.16
TRPM1-208	ENST00000558768	TRPT1	Q86TN4	253 aa	Known RBP	7.81	□□□□□ -1.16
TRPM1-208	ENST00000558768		H0YGX0	51 aa		7.8	□□□□□ -1.16
TRPM1-208	ENST00000558768	NDUFA7	O95182	113 aa		7.8	□□□□□ -1.16
TRPM1-208	ENST00000558768	DTX1	Q86Y01	620 aa		7.8	□□□□□ -1.16
TRPM1-208	ENST00000558768	C20orf197	Q8N268	126 aa		7.8	□□□□□ -1.16
TRPM1-208	ENST00000558768	IGKV1-39	P01597	117 aa		7.8	□□□□□ -1.16
TRPM1-208	ENST00000558768	IGKV1D-39	P04432	117 aa		7.8	□□□□□ -1.16
TRPM1-208	ENST00000558768	C1orf53	Q5VUE5	145 aa		7.8	□□□□□ -1.16
TRPM1-208	ENST00000558768	SMRP1	Q8NCR6	262 aa		7.8	□□□□□ -1.16
TRPM1-208	ENST00000558768		K7EMI3	77 aa		7.79	□□□□□ -1.16
TRPM1-208	ENST00000558768	NBR2	O15453	112 aa		7.79	□□□□□ -1.16
TRPM1-208	ENST00000558768	PRB3	Q04118	309 aa	Predicted RBP	7.79	□□□□□ -1.16
TRPM1-208	ENST00000558768	C3orf36	Q3SXR2	165 aa		7.79	□□□□□ -1.16
TRPM1-208	ENST00000558768		Q6ZSR3	168 aa		7.79	□□□□□ -1.16
TRPM1-208	ENST00000558768		Q8TAT8	98 aa		7.79	□□□□□ -1.16
TRPM1-208	ENST00000558768	ITLN2	Q8WWU7	325 aa	Predicted RBP	7.79	□□□□□ -1.16
TRPM1-208	ENST00000558768	VSIG2	Q96IQ7	327 aa		7.79	□□□□□ -1.16
TRPM1-208	ENST00000558768	TTTY12	Q9BZ98	90 aa		7.79	□□□□□ -1.16
TRPM1-208	ENST00000558768	SRRM4	A7MD48	611 aa	Known RBP	7.79	□□□□□ -1.16
TRPM1-208	ENST00000558768	ODF3L1	Q8IXM7	274 aa		7.79	□□□□□ -1.16
TRPM1-208	ENST00000558768	TRAV25	A0A0B4J276	109 aa		7.79	□□□□□ -1.16
TRPM1-208	ENST00000558768	C21orf140	B9A014	251 aa		7.79	□□□□□ -1.16
TRPM1-208	ENST00000558768	BUB3	O43684	328 aa		7.79	□□□□□ -1.16
TRPM1-208	ENST00000558768	DTX2	Q86UW9	622 aa		7.79	□□□□□ -1.16
TRPM1-208	ENST00000558768	IGFBPL1	Q8WX77	278 aa		7.79	□□□□□ -1.16
TRPM1-208	ENST00000558768	CACNA1H	O95180	2353 aa		7.79	□□□□□ -1.16
TRPM1-208	ENST00000558768	TMEM75	Q8N9X5	138 aa		7.78	□□□□□ -1.16
TRPM1-208	ENST00000558768	SRXN1	Q9BYN0	137 aa		7.78	□□□□□ -1.16
TRPM1-208	ENST00000558768		M0R1W7	72 aa		7.78	□□□□□ -1.16
TRPM1-208	ENST00000558768	CRYGC	P07315	174 aa		7.78	□□□□□ -1.16
TRPM1-208	ENST00000558768	RSPO1	Q2MKA7	263 aa	Predicted RBP	7.78	□□□□□ -1.16
TRPM1-208	ENST00000558768	CTRL	P40313	264 aa		7.78	□□□□□ -1.16
TRPM1-208	ENST00000558768	ZIC4	Q8N9L1	334 aa		7.78	□□□□□ -1.16
TRPM1-208	ENST00000558768	MPLKIP	Q8TAP9	179 aa		7.78	□□□□□ -1.16
TRPM1-208	ENST00000558768	JMJD7-PLA2G4B	H0Y9G9	81 aa		7.78	□□□□□ -1.16
TRPM1-208	ENST00000558768	CLPSL1	A2RUU4	121 aa		7.77	□□□□□ -1.17
TRPM1-208	ENST00000558768	ATP5E	P56381	51 aa	Predicted RBP	7.77	□□□□□ -1.17
TRPM1-208	ENST00000558768	IGHV1-45	A0A0A0MS14	117 aa		7.77	□□□□□ -1.17

Retrieved 100 of 20,778 RNA–protein pairs in 54.7 ms