RNA–Protein interactions for RNA: ENST00000558324.1

HERC1-202, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 5

Gene HERC1, Length 828 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-202ENST00000558324 C17orf112F2Z3M2 114 aa8.36□□□□□ -1.07
HERC1-202ENST00000558324 OR7C2O60412 319 aa8.36□□□□□ -1.07
HERC1-202ENST00000558324 MPC2O95563 127 aa8.36□□□□□ -1.07
HERC1-202ENST00000558324 PET100P0DJ07 73 aa8.36□□□□□ -1.07
HERC1-202ENST00000558324 RNASE4P34096 147 aaKnown RBP8.36□□□□□ -1.07
HERC1-202ENST00000558324 CD300CQ08708 224 aa8.36□□□□□ -1.07
HERC1-202ENST00000558324 OR5I1Q13606 314 aa8.36□□□□□ -1.07
HERC1-202ENST00000558324 RNF141Q8WVD5 230 aa8.36□□□□□ -1.07
HERC1-202ENST00000558324 PHYHIPLQ96FC7 376 aa8.36□□□□□ -1.07
HERC1-202ENST00000558324 PAXXQ9BUH6 204 aa8.36□□□□□ -1.07
HERC1-202ENST00000558324 MRPL32Q9BYC8 188 aaKnown RBP8.36□□□□□ -1.07
HERC1-202ENST00000558324 AGPAT4-IT1Q9H0P7 198 aa8.36□□□□□ -1.07
HERC1-202ENST00000558324 OR51M1Q9H341 326 aa8.36□□□□□ -1.07
HERC1-202ENST00000558324 MBD2Q9UBB5 411 aa8.36□□□□□ -1.07
HERC1-202ENST00000558324 HSPB11Q9Y547 144 aa8.36□□□□□ -1.07
HERC1-202ENST00000558324 EIF3GO75821 320 aaKnown RBP eCLIP8.35□□□□□ -1.07
HERC1-202ENST00000558324 SLC25A5P05141 298 aaKnown RBP8.35□□□□□ -1.07
HERC1-202ENST00000558324 NBEAP1P0C6P0 100 aa8.35□□□□□ -1.07
HERC1-202ENST00000558324 FFAR4Q5NUL3 377 aa8.35□□□□□ -1.07
HERC1-202ENST00000558324 Q6ZR54 194 aa8.35□□□□□ -1.07
HERC1-202ENST00000558324 FXYD5Q96DB9 178 aa8.35□□□□□ -1.07
HERC1-202ENST00000558324 VGLL1Q99990 258 aa8.35□□□□□ -1.07
HERC1-202ENST00000558324 PYGO2Q9BRQ0 406 aa8.35□□□□□ -1.07
HERC1-202ENST00000558324 GSN-AS1Q9NRJ2 163 aa8.35□□□□□ -1.07
HERC1-202ENST00000558324 FUT9Q9Y231 359 aa8.35□□□□□ -1.07
HERC1-202ENST00000558324 TRAV26-1A0A087WT03 109 aa8.34□□□□□ -1.07
HERC1-202ENST00000558324 A0A0J9YY99 117 aa8.34□□□□□ -1.07
HERC1-202ENST00000558324 KLLNB2CW77 178 aa8.34□□□□□ -1.07
HERC1-202ENST00000558324 GPX1P07203 203 aa8.34□□□□□ -1.07
HERC1-202ENST00000558324 HOXA5P20719 270 aa8.34□□□□□ -1.07
HERC1-202ENST00000558324 RPL12P30050 165 aaKnown RBP8.34□□□□□ -1.07
HERC1-202ENST00000558324 UBE2L3P68036 154 aaKnown RBP8.34□□□□□ -1.07
HERC1-202ENST00000558324 TMEM78Q5T7P6 136 aa8.34□□□□□ -1.07
HERC1-202ENST00000558324 Q6ZTI0 123 aa8.34□□□□□ -1.07
HERC1-202ENST00000558324 LINC00612Q8N6U2 182 aa8.34□□□□□ -1.07
HERC1-202ENST00000558324 Q8TAT8 98 aa8.34□□□□□ -1.07
HERC1-202ENST00000558324 SCGB1C1Q8TD33 95 aa8.34□□□□□ -1.07
HERC1-202ENST00000558324 LINC00477Q96M19 166 aa8.34□□□□□ -1.07
HERC1-202ENST00000558324 TMPRSS5Q9H3S3 457 aa8.34□□□□□ -1.07
HERC1-202ENST00000558324 A0A1B0GVY2 172 aa8.33□□□□□ -1.08
HERC1-202ENST00000558324 IFNA5P01569 189 aa8.33□□□□□ -1.08
HERC1-202ENST00000558324 CCL18P55774 89 aa8.33□□□□□ -1.08
HERC1-202ENST00000558324 RANP62826 216 aaKnown RBP8.33□□□□□ -1.08
HERC1-202ENST00000558324 SOHLH1Q5JUK2 328 aa8.33□□□□□ -1.08
HERC1-202ENST00000558324 PRR9Q5T870 116 aa8.33□□□□□ -1.08
HERC1-202ENST00000558324 Q6ZQT7 251 aa8.33□□□□□ -1.08
HERC1-202ENST00000558324 C9orf47Q6ZRZ4 202 aa8.33□□□□□ -1.08
HERC1-202ENST00000558324 GNPNAT1Q96EK6 184 aaPredicted RBP8.33□□□□□ -1.08
HERC1-202ENST00000558324 ZNF503Q96F45 646 aa8.33□□□□□ -1.08
HERC1-202ENST00000558324 FAM19A4Q96LR4 140 aa8.33□□□□□ -1.08
HERC1-202ENST00000558324 DNAH17Q9UFH2 4485 aa8.33□□□□□ -1.08
HERC1-202ENST00000558324 TRGV2A0A075B6R0 118 aa8.32□□□□□ -1.08
HERC1-202ENST00000558324 TRGV1A0A0A0MS02 117 aa8.32□□□□□ -1.08
HERC1-202ENST00000558324 ZNF324O75467 553 aaPredicted RBP8.32□□□□□ -1.08
HERC1-202ENST00000558324 CRISP2P16562 243 aa8.32□□□□□ -1.08
HERC1-202ENST00000558324 M6PRP20645 277 aa8.32□□□□□ -1.08
HERC1-202ENST00000558324 FAM3BP58499 235 aaPredicted RBP8.32□□□□□ -1.08
HERC1-202ENST00000558324 C1orf134Q5TEV5 83 aa8.32□□□□□ -1.08
HERC1-202ENST00000558324 EIF4E3Q8N5X7 224 aaKnown RBP8.32□□□□□ -1.08
HERC1-202ENST00000558324 ZFAND2AQ8N6M9 145 aa8.32□□□□□ -1.08
HERC1-202ENST00000558324 C11orf72Q8NBR9 251 aa8.32□□□□□ -1.08
HERC1-202ENST00000558324 ZNF680Q8NEM1 530 aa8.32□□□□□ -1.08
HERC1-202ENST00000558324 ZNRF2Q8NHG8 242 aa8.32□□□□□ -1.08
HERC1-202ENST00000558324 Q9H3A6 140 aa8.32□□□□□ -1.08
HERC1-202ENST00000558324 WFDC1Q9HC57 220 aa8.32□□□□□ -1.08
HERC1-202ENST00000558324 LINC00588Q9Y4M8 146 aa8.32□□□□□ -1.08
HERC1-202ENST00000558324 ALG5Q9Y673 324 aa8.32□□□□□ -1.08
HERC1-202ENST00000558324 NACAE9PAV3 2078 aa8.32□□□□□ -1.08
HERC1-202ENST00000558324 HERC2O95714 4834 aa8.32□□□□□ -1.08
HERC1-202ENST00000558324 RGS13O14921 159 aa8.31□□□□□ -1.08
HERC1-202ENST00000558324 CSN1S1P47710 185 aa8.31□□□□□ -1.08
HERC1-202ENST00000558324 ZNF138P52744 262 aa8.31□□□□□ -1.08
HERC1-202ENST00000558324 DAZ2Q13117 558 aaKnown RBP8.31□□□□□ -1.08
HERC1-202ENST00000558324 KHDC3LQ587J8 217 aa8.31□□□□□ -1.08
HERC1-202ENST00000558324 SSX7Q7RTT5 188 aa8.31□□□□□ -1.08
HERC1-202ENST00000558324 HYLS1Q96M11 299 aa8.31□□□□□ -1.08
HERC1-202ENST00000558324 BATF3Q9NR55 127 aa8.31□□□□□ -1.08
HERC1-202ENST00000558324 ZNF492Q9P255 531 aa8.31□□□□□ -1.08
HERC1-202ENST00000558324 TP53TG3Q9ULZ0 132 aa8.31□□□□□ -1.08
HERC1-202ENST00000558324 RPH3ALQ9UNE2 315 aa8.31□□□□□ -1.08
HERC1-202ENST00000558324 KLF12Q9Y4X4 402 aa8.31□□□□□ -1.08
HERC1-202ENST00000558324 NBDYA0A0U1RRE5 68 aa8.3□□□□□ -1.08
HERC1-202ENST00000558324 TAS2R45P59539 299 aa8.3□□□□□ -1.08
HERC1-202ENST00000558324 RXFP4Q8TDU9 374 aa8.3□□□□□ -1.08
HERC1-202ENST00000558324 ARPC5LQ9BPX5 153 aa8.3□□□□□ -1.08
HERC1-202ENST00000558324 IGHV1OR15-1A0A075B7D0 117 aa8.29□□□□□ -1.08
HERC1-202ENST00000558324 HMGB3O15347 200 aaKnown RBP8.29□□□□□ -1.08
HERC1-202ENST00000558324 IGHV3-53P01767 116 aa8.29□□□□□ -1.08
HERC1-202ENST00000558324 TCL1AP56279 114 aa8.29□□□□□ -1.08
HERC1-202ENST00000558324 RAB2AP61019 212 aa8.29□□□□□ -1.08
HERC1-202ENST00000558324 ANXA2RQ3ZCQ2 193 aa8.29□□□□□ -1.08
HERC1-202ENST00000558324 MUC21Q5SSG8 566 aa8.29□□□□□ -1.08
HERC1-202ENST00000558324 LINC00467Q9BRT7 94 aa8.29□□□□□ -1.08
HERC1-202ENST00000558324 MRPL16Q9NX20 251 aaKnown RBP8.29□□□□□ -1.08
HERC1-202ENST00000558324 DYNC1H1Q14204 4646 aaKnown RBP8.28□□□□□ -1.08
HERC1-202ENST00000558324 KIAA1109Q2LD37 5005 aa8.28□□□□□ -1.08
HERC1-202ENST00000558324 A0A1W2PPV4 95 aa8.28□□□□□ -1.08
HERC1-202ENST00000558324 NMBP08949 121 aa8.28□□□□□ -1.08
HERC1-202ENST00000558324 ACOT6Q3I5F7 207 aaPredicted RBP8.28□□□□□ -1.08
HERC1-202ENST00000558324 LYPD1Q8N2G4 141 aa8.28□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms