RNA–Protein interactions for RNA: ENST00000558155.1

SPG11-208, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 5

Gene SPG11, Length 571 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-208ENST00000558155 PXDC1Q5TGL8 231 aa3.49□□□□□ -1.85
SPG11-208ENST00000558155 CCDC190Q86UF4 302 aa3.49□□□□□ -1.85
SPG11-208ENST00000558155 C15orf40Q8WUR7 153 aa3.49□□□□□ -1.85
SPG11-208ENST00000558155 SHANK2-AS3Q9BTD1 123 aa3.49□□□□□ -1.85
SPG11-208ENST00000558155 FAM30AQ9NZY2 134 aa3.49□□□□□ -1.85
SPG11-208ENST00000558155 MGAT4CQ9UBM8 478 aa3.49□□□□□ -1.85
SPG11-208ENST00000558155 MTFP1Q9UDX5 166 aa3.49□□□□□ -1.85
SPG11-208ENST00000558155 PRO0255Q9UI72 69 aa3.49□□□□□ -1.85
SPG11-208ENST00000558155 GPR132Q9UNW8 380 aa3.49□□□□□ -1.85
SPG11-208ENST00000558155 HHLA3Q9XRX5 114 aa3.49□□□□□ -1.85
SPG11-208ENST00000558155 FUT9Q9Y231 359 aa3.49□□□□□ -1.85
SPG11-208ENST00000558155 HIGD1AQ9Y241 93 aa3.49□□□□□ -1.85
SPG11-208ENST00000558155 A0A087X0K7 114 aa3.48□□□□□ -1.85
SPG11-208ENST00000558155 TRAV12-3A0A0B4J271 114 aa3.48□□□□□ -1.85
SPG11-208ENST00000558155 A0A0B4J2A0 478 aa3.48□□□□□ -1.85
SPG11-208ENST00000558155 LRCOL1A6NCL2 159 aa3.48□□□□□ -1.85
SPG11-208ENST00000558155 LINC00587B1AMM8 73 aa3.48□□□□□ -1.85
SPG11-208ENST00000558155 DISC1C4P0D8 188 aa3.48□□□□□ -1.85
SPG11-208ENST00000558155 H3BRN7 92 aa3.48□□□□□ -1.85
SPG11-208ENST00000558155 HPGDSO60760 199 aa3.48□□□□□ -1.85
SPG11-208ENST00000558155 IL5P05113 134 aa3.48□□□□□ -1.85
SPG11-208ENST00000558155 CRYGDP07320 174 aa3.48□□□□□ -1.85
SPG11-208ENST00000558155 OR5G3P0C626 314 aa3.48□□□□□ -1.85
SPG11-208ENST00000558155 LINC00614P0C842 121 aa3.48□□□□□ -1.85
SPG11-208ENST00000558155 CXCL2P19875 107 aa3.48□□□□□ -1.85
SPG11-208ENST00000558155 CRYBA4P53673 196 aa3.48□□□□□ -1.85
SPG11-208ENST00000558155 LSM3P62310 102 aaKnown RBP3.48□□□□□ -1.85
SPG11-208ENST00000558155 KIR3DS1Q14943 382 aa3.48□□□□□ -1.85
SPG11-208ENST00000558155 GFI1BQ5VTD9 330 aa3.48□□□□□ -1.85
SPG11-208ENST00000558155 IZUMO2Q6UXV1 221 aa3.48□□□□□ -1.85
SPG11-208ENST00000558155 TMEM182Q6ZP80 229 aaPredicted RBP3.48□□□□□ -1.85
SPG11-208ENST00000558155 Q8N814 137 aa3.48□□□□□ -1.85
SPG11-208ENST00000558155 OR52I2Q8NH67 350 aa3.48□□□□□ -1.85
SPG11-208ENST00000558155 ZNF431Q8TF32 576 aaPredicted RBP3.48□□□□□ -1.85
SPG11-208ENST00000558155 ST6GAL2Q96JF0 529 aa3.48□□□□□ -1.85
SPG11-208ENST00000558155 SCGB3A2Q96PL1 93 aa3.48□□□□□ -1.85
SPG11-208ENST00000558155 CIB3Q96Q77 187 aaPredicted RBP3.48□□□□□ -1.85
SPG11-208ENST00000558155 Q9H521 79 aa3.48□□□□□ -1.85
SPG11-208ENST00000558155 GSN-AS1Q9NRJ2 163 aa3.48□□□□□ -1.85
SPG11-208ENST00000558155 CCDC59Q9P031 241 aaKnown RBP3.48□□□□□ -1.85
SPG11-208ENST00000558155 RSL24D1Q9UHA3 163 aaKnown RBP3.48□□□□□ -1.85
SPG11-208ENST00000558155 SHPKQ9UHJ6 478 aa3.48□□□□□ -1.85
SPG11-208ENST00000558155 STRAPQ9Y3F4 350 aaKnown RBP3.48□□□□□ -1.85
SPG11-208ENST00000558155 TRGV4A0A0C4DH28 118 aa3.47□□□□□ -1.85
SPG11-208ENST00000558155 PMS2P5A8MQ11 134 aa3.47□□□□□ -1.85
SPG11-208ENST00000558155 E5RGE8 158 aa3.47□□□□□ -1.85
SPG11-208ENST00000558155 TCAPO15273 167 aa3.47□□□□□ -1.85
SPG11-208ENST00000558155 SPINK4O60575 86 aa3.47□□□□□ -1.85
SPG11-208ENST00000558155 IGHV3-53P01767 116 aa3.47□□□□□ -1.85
SPG11-208ENST00000558155 SLC25A5P05141 298 aaKnown RBP3.47□□□□□ -1.85
SPG11-208ENST00000558155 PRB4P10163 310 aaPredicted RBP3.47□□□□□ -1.85
SPG11-208ENST00000558155 IAPPP10997 89 aa3.47□□□□□ -1.85
SPG11-208ENST00000558155 ANXA3P12429 323 aa3.47□□□□□ -1.85
SPG11-208ENST00000558155 SRIP30626 198 aa3.47□□□□□ -1.85
SPG11-208ENST00000558155 TGFBR1P36897 503 aa3.47□□□□□ -1.85
SPG11-208ENST00000558155 AKR1D1P51857 326 aa3.47□□□□□ -1.85
SPG11-208ENST00000558155 PLP1P60201 277 aa3.47□□□□□ -1.85
SPG11-208ENST00000558155 SELENOTP62341 195 aa3.47□□□□□ -1.85
SPG11-208ENST00000558155 AKR1C1Q04828 323 aa3.47□□□□□ -1.85
SPG11-208ENST00000558155 SSBP1Q04837 148 aaKnown RBP3.47□□□□□ -1.85
SPG11-208ENST00000558155 ZNF415Q09FC8 603 aa3.47□□□□□ -1.85
SPG11-208ENST00000558155 NEDD8Q15843 81 aa3.47□□□□□ -1.85
SPG11-208ENST00000558155 TDRG1Q3Y452 100 aa3.47□□□□□ -1.85
SPG11-208ENST00000558155 ANXA2RQ3ZCQ2 193 aa3.47□□□□□ -1.85
SPG11-208ENST00000558155 SPANXN2Q5MJ10 180 aa3.47□□□□□ -1.85
SPG11-208ENST00000558155 LCN15Q6UWW0 184 aa3.47□□□□□ -1.85
SPG11-208ENST00000558155 CYP2G1PQ6ZSU1 146 aa3.47□□□□□ -1.85
SPG11-208ENST00000558155 LYZL2Q7Z4W2 148 aa3.47□□□□□ -1.85
SPG11-208ENST00000558155 EIF4E3Q8N5X7 224 aaKnown RBP3.47□□□□□ -1.85
SPG11-208ENST00000558155 LRTM2Q8N967 370 aa3.47□□□□□ -1.85
SPG11-208ENST00000558155 OR2D3Q8NGH3 330 aa3.47□□□□□ -1.85
SPG11-208ENST00000558155 OR51S1Q8NGJ8 323 aa3.47□□□□□ -1.85
SPG11-208ENST00000558155 PCNPQ8WW12 178 aaKnown RBP3.47□□□□□ -1.85
SPG11-208ENST00000558155 ZNF479Q96JC4 524 aa3.47□□□□□ -1.85
SPG11-208ENST00000558155 C8orf49Q96NF6 230 aa3.47□□□□□ -1.85
SPG11-208ENST00000558155 ODF3Q96PU9 254 aa3.47□□□□□ -1.85
SPG11-208ENST00000558155 TXNDC17Q9BRA2 123 aa3.47□□□□□ -1.85
SPG11-208ENST00000558155 SLC50A1Q9BRV3 221 aa3.47□□□□□ -1.85
SPG11-208ENST00000558155 TM2D2Q9BX73 214 aa3.47□□□□□ -1.85
SPG11-208ENST00000558155 MRPL32Q9BYC8 188 aaKnown RBP3.47□□□□□ -1.85
SPG11-208ENST00000558155 PARD6GQ9BYG4 376 aaPredicted RBP3.47□□□□□ -1.85
SPG11-208ENST00000558155 OR51M1Q9H341 326 aa3.47□□□□□ -1.85
SPG11-208ENST00000558155 ZNF331Q9NQX6 463 aaPredicted RBP3.47□□□□□ -1.85
SPG11-208ENST00000558155 RCL1Q9Y2P8 373 aaKnown RBP3.47□□□□□ -1.85
SPG11-208ENST00000558155 VPS13BQ7Z7G8 4022 aa3.47□□□□□ -1.85
SPG11-208ENST00000558155 IGHV3-38A0A0C4DH36 116 aa3.46□□□□□ -1.86
SPG11-208ENST00000558155 CCDC160A6NGH7 325 aa3.46□□□□□ -1.86
SPG11-208ENST00000558155 IBA57-AS1B1ANH7 110 aa3.46□□□□□ -1.86
SPG11-208ENST00000558155 K7EQD1 137 aa3.46□□□□□ -1.86
SPG11-208ENST00000558155 MPDU1O75352 247 aa3.46□□□□□ -1.86
SPG11-208ENST00000558155 PITX3O75364 302 aa3.46□□□□□ -1.86
SPG11-208ENST00000558155 ORM1P02763 201 aa3.46□□□□□ -1.86
SPG11-208ENST00000558155 AKAIN1P0CW23 69 aa3.46□□□□□ -1.86
SPG11-208ENST00000558155 CT45A10P0DMU9 189 aa3.46□□□□□ -1.86
SPG11-208ENST00000558155 SRPXP78539 464 aa3.46□□□□□ -1.86
SPG11-208ENST00000558155 FHL2Q14192 279 aa3.46□□□□□ -1.86
SPG11-208ENST00000558155 SPANXN5Q5MJ07 72 aa3.46□□□□□ -1.86
SPG11-208ENST00000558155 Q6ZSA8 131 aa3.46□□□□□ -1.86
SPG11-208ENST00000558155 ACOT7LQ6ZUV0 252 aa3.46□□□□□ -1.86
SPG11-208ENST00000558155 SH2D6Q7Z4S9 175 aa3.46□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 79.8 ms