RNA–Protein interactions for RNA: ENST00000557439.5

XRCC3-218, Transcript of X-ray repair cross complementing 3, humanhuman

TSL 5

Gene XRCC3, Length 2,599 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC3-218ENST00000557439 EBI3Q14213 229 aa13.72□□□□□ -0.21
XRCC3-218ENST00000557439 LINC01545Q5VT33 79 aa13.72□□□□□ -0.21
XRCC3-218ENST00000557439 ZNF493Q6ZR52 646 aa13.72□□□□□ -0.21
XRCC3-218ENST00000557439 Q6ZQT7 251 aa13.71□□□□□ -0.21
XRCC3-218ENST00000557439 TMEM219Q86XT9 240 aa13.71□□□□□ -0.21
XRCC3-218ENST00000557439 OR10AG1Q8NH19 301 aa13.71□□□□□ -0.21
XRCC3-218ENST00000557439 SVIPQ8NHG7 77 aa13.71□□□□□ -0.21
XRCC3-218ENST00000557439 BPESC1Q9GZL8 116 aa13.71□□□□□ -0.21
XRCC3-218ENST00000557439 PTTG1IPP53801 180 aa13.71□□□□□ -0.22
XRCC3-218ENST00000557439 DTX2Q86UW9 622 aa13.71□□□□□ -0.22
XRCC3-218ENST00000557439 FER1L6-AS1Q8NA97 138 aa13.71□□□□□ -0.22
XRCC3-218ENST00000557439 Q6AWC8 147 aa13.7□□□□□ -0.22
XRCC3-218ENST00000557439 ZNF502Q8TBZ5 544 aa13.7□□□□□ -0.22
XRCC3-218ENST00000557439 MINOS1Q5TGZ0 78 aa13.7□□□□□ -0.22
XRCC3-218ENST00000557439 IL17RELQ6ZVW7 336 aa13.7□□□□□ -0.22
XRCC3-218ENST00000557439 ORMDL3Q8N138 153 aa13.7□□□□□ -0.22
XRCC3-218ENST00000557439 CCDC140Q96MF4 163 aa13.7□□□□□ -0.22
XRCC3-218ENST00000557439 ZFAND3Q9H8U3 227 aa13.7□□□□□ -0.22
XRCC3-218ENST00000557439 MINOS1-NBL1R4GNA1 71 aa13.7□□□□□ -0.22
XRCC3-218ENST00000557439 CKS2P33552 79 aa13.69□□□□□ -0.22
XRCC3-218ENST00000557439 SAPCD1Q5SSQ6 148 aa13.69□□□□□ -0.22
XRCC3-218ENST00000557439 ABCA2Q9BZC7 2435 aa13.69□□□□□ -0.22
XRCC3-218ENST00000557439 IGHV2-70DA0A0C4DH43 119 aa13.69□□□□□ -0.22
XRCC3-218ENST00000557439 C1orf122Q6ZSJ8 110 aa13.69□□□□□ -0.22
XRCC3-218ENST00000557439 S100A7AQ86SG5 101 aa13.69□□□□□ -0.22
XRCC3-218ENST00000557439 ORAOV1Q8WV07 137 aa13.69□□□□□ -0.22
XRCC3-218ENST00000557439 A0A1B0GW15 77 aa13.68□□□□□ -0.22
XRCC3-218ENST00000557439 GATA1P15976 413 aaPredicted RBP13.68□□□□□ -0.22
XRCC3-218ENST00000557439 ANKRD39Q53RE8 183 aa13.68□□□□□ -0.22
XRCC3-218ENST00000557439 BVES-AS1Q5T3Y7 98 aa13.68□□□□□ -0.22
XRCC3-218ENST00000557439 PRSS57Q6UWY2 283 aa13.68□□□□□ -0.22
XRCC3-218ENST00000557439 CLPSL1A2RUU4 121 aa13.68□□□□□ -0.22
XRCC3-218ENST00000557439 BUB3O43684 328 aa13.68□□□□□ -0.22
XRCC3-218ENST00000557439 EVI2AP22794 236 aa13.68□□□□□ -0.22
XRCC3-218ENST00000557439 ZNF738Q8NE65 137 aa13.68□□□□□ -0.22
XRCC3-218ENST00000557439 UQCRFS1P47985 274 aa13.67□□□□□ -0.22
XRCC3-218ENST00000557439 CACNG7P62955 275 aa13.67□□□□□ -0.22
XRCC3-218ENST00000557439 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa13.67□□□□□ -0.22
XRCC3-218ENST00000557439 FAM110DQ8TAY7 271 aaPredicted RBP13.67□□□□□ -0.22
XRCC3-218ENST00000557439 SELENOKQ9Y6D0 94 aa13.67□□□□□ -0.22
XRCC3-218ENST00000557439 U3KQK5 164 aa13.67□□□□□ -0.22
XRCC3-218ENST00000557439 SPG11Q96JI7 2443 aa13.67□□□□□ -0.22
XRCC3-218ENST00000557439 CBY3A6NI87 242 aa13.67□□□□□ -0.22
XRCC3-218ENST00000557439 C19orf84I3L1E1 186 aa13.67□□□□□ -0.22
XRCC3-218ENST00000557439 IGLC6P0CF74 106 aa13.67□□□□□ -0.22
XRCC3-218ENST00000557439 C18orf15Q96N68 181 aa13.67□□□□□ -0.22
XRCC3-218ENST00000557439 OOSP1A8MZH6 123 aa13.66□□□□□ -0.22
XRCC3-218ENST00000557439 C11orf21Q9P2W6 132 aa13.66□□□□□ -0.22
XRCC3-218ENST00000557439 UBE2E1P51965 193 aa13.66□□□□□ -0.22
XRCC3-218ENST00000557439 LMO4P61968 165 aa13.66□□□□□ -0.22
XRCC3-218ENST00000557439 NHLH1Q02575 133 aa13.65□□□□□ -0.22
XRCC3-218ENST00000557439 C2orf91Q6ZV80 131 aa13.65□□□□□ -0.22
XRCC3-218ENST00000557439 PSMG3-AS1Q96PY0 264 aa13.65□□□□□ -0.22
XRCC3-218ENST00000557439 COL25A1Q9BXS0 654 aaPredicted RBP13.65□□□□□ -0.22
XRCC3-218ENST00000557439 CELSR2Q9HCU4 2923 aa13.65□□□□□ -0.22
XRCC3-218ENST00000557439 TAX1BP3O14907 124 aa13.65□□□□□ -0.22
XRCC3-218ENST00000557439 RNF185Q96GF1 192 aa13.65□□□□□ -0.22
XRCC3-218ENST00000557439 BMI1P35226 326 aa13.64□□□□□ -0.23
XRCC3-218ENST00000557439 UBE2V1Q13404 147 aa13.64□□□□□ -0.23
XRCC3-218ENST00000557439 VAMP3Q15836 100 aa13.64□□□□□ -0.23
XRCC3-218ENST00000557439 BRD3OSQ6XYD6 125 aa13.64□□□□□ -0.23
XRCC3-218ENST00000557439 COX8CQ7Z4L0 72 aa13.64□□□□□ -0.23
XRCC3-218ENST00000557439 AGPAT4-IT1Q9H0P7 198 aa13.64□□□□□ -0.23
XRCC3-218ENST00000557439 J3KRW8 73 aa13.63□□□□□ -0.23
XRCC3-218ENST00000557439 SPRY2O43597 315 aa13.63□□□□□ -0.23
XRCC3-218ENST00000557439 UCNP55089 124 aa13.63□□□□□ -0.23
XRCC3-218ENST00000557439 DEFB1P60022 68 aa13.63□□□□□ -0.23
XRCC3-218ENST00000557439 PAX8Q06710 450 aa13.63□□□□□ -0.23
XRCC3-218ENST00000557439 IGKV3D-20A0A0C4DH25 116 aa13.63□□□□□ -0.23
XRCC3-218ENST00000557439 CENPVL3A0A0U1RRI6 287 aa13.63□□□□□ -0.23
XRCC3-218ENST00000557439 FABP5P3A8MUU1 101 aa13.63□□□□□ -0.23
XRCC3-218ENST00000557439 CSMD2Q7Z408 3487 aa13.62□□□□□ -0.23
XRCC3-218ENST00000557439 TRAV8-2A0A0B4J237 113 aa13.62□□□□□ -0.23
XRCC3-218ENST00000557439 COX8AP10176 69 aa13.62□□□□□ -0.23
XRCC3-218ENST00000557439 EFNA4P52798 201 aa13.62□□□□□ -0.23
XRCC3-218ENST00000557439 RNASE8Q8TDE3 154 aaKnown RBP13.62□□□□□ -0.23
XRCC3-218ENST00000557439 DKK2Q9UBU2 259 aa13.62□□□□□ -0.23
XRCC3-218ENST00000557439 NPFFO15130 113 aa13.62□□□□□ -0.23
XRCC3-218ENST00000557439 SCGB2A1O75556 95 aa13.62□□□□□ -0.23
XRCC3-218ENST00000557439 GOSR1O95249 250 aa13.62□□□□□ -0.23
XRCC3-218ENST00000557439 HBDP02042 147 aa13.62□□□□□ -0.23
XRCC3-218ENST00000557439 TRGV3P03979 118 aa13.62□□□□□ -0.23
XRCC3-218ENST00000557439 MS4A6AQ9H2W1 248 aa13.62□□□□□ -0.23
XRCC3-218ENST00000557439 CRYBG3Q68DQ2 2970 aa13.6□□□□□ -0.23
XRCC3-218ENST00000557439 TRAV26-2A0A0B4J265 109 aa13.6□□□□□ -0.23
XRCC3-218ENST00000557439 IGF1P05019 195 aa13.6□□□□□ -0.23
XRCC3-218ENST00000557439 IFI27L1Q96BM0 104 aa13.6□□□□□ -0.23
XRCC3-218ENST00000557439 TRBV12-3P01733 135 aa13.6□□□□□ -0.23
XRCC3-218ENST00000557439 FGF6P10767 208 aa13.6□□□□□ -0.23
XRCC3-218ENST00000557439 C8orf86Q6ZUL3 223 aa13.6□□□□□ -0.23
XRCC3-218ENST00000557439 C5orf56Q8N8D9 126 aa13.6□□□□□ -0.23
XRCC3-218ENST00000557439 TMEM190Q8WZ59 177 aa13.6□□□□□ -0.23
XRCC3-218ENST00000557439 RPS20P60866 119 aaKnown RBP13.59□□□□□ -0.23
XRCC3-218ENST00000557439 HIST1H1AQ02539 215 aaPredicted RBP13.59□□□□□ -0.23
XRCC3-218ENST00000557439 DEFB125Q8N687 156 aa13.59□□□□□ -0.23
XRCC3-218ENST00000557439 PCP2Q8IVA1 136 aa13.58□□□□□ -0.24
XRCC3-218ENST00000557439 TTTY13Q9BZ97 58 aa13.58□□□□□ -0.24
XRCC3-218ENST00000557439 TNFRSF6BO95407 300 aa13.58□□□□□ -0.24
XRCC3-218ENST00000557439 LEPP41159 167 aa13.58□□□□□ -0.24
XRCC3-218ENST00000557439 PRR9Q5T870 116 aa13.58□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 83.1 ms