RNA–Protein interactions for RNA: ENST00000556648.1

TMEM260-211, Transcript of transmembrane protein 260, humanhuman

TSL 2

Gene TMEM260, Length 2,013 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-211ENST00000556648 S100A7P31151 101 aa7.74□□□□□ -1.17
TMEM260-211ENST00000556648 ZNF138P52744 262 aa7.74□□□□□ -1.17
TMEM260-211ENST00000556648 CFHR3Q02985 330 aa7.74□□□□□ -1.17
TMEM260-211ENST00000556648 RIGQ13278 110 aa7.74□□□□□ -1.17
TMEM260-211ENST00000556648 SAPCD1Q5SSQ6 148 aa7.74□□□□□ -1.17
TMEM260-211ENST00000556648 TEX43Q6ZNM6 134 aa7.74□□□□□ -1.17
TMEM260-211ENST00000556648 KIR2DL5AQ8N109 375 aa7.74□□□□□ -1.17
TMEM260-211ENST00000556648 GLMPQ8WWB7 406 aa7.74□□□□□ -1.17
TMEM260-211ENST00000556648 SLC50A1Q9BRV3 221 aa7.74□□□□□ -1.17
TMEM260-211ENST00000556648 CR1P17927 2039 aa7.74□□□□□ -1.17
TMEM260-211ENST00000556648 TGFAP01135 160 aa7.74□□□□□ -1.17
TMEM260-211ENST00000556648 RAB9AP51151 201 aa7.74□□□□□ -1.17
TMEM260-211ENST00000556648 Q6ZQT7 251 aa7.74□□□□□ -1.17
TMEM260-211ENST00000556648 REC114Q7Z4M0 266 aa7.74□□□□□ -1.17
TMEM260-211ENST00000556648 GPHB5Q86YW7 130 aa7.74□□□□□ -1.17
TMEM260-211ENST00000556648 ARL6IP6Q8N6S5 226 aa7.74□□□□□ -1.17
TMEM260-211ENST00000556648 OR4X2Q8NGF9 303 aa7.74□□□□□ -1.17
TMEM260-211ENST00000556648 HSBP1O75506 76 aa7.73□□□□□ -1.17
TMEM260-211ENST00000556648 IGLV1-40P01703 118 aa7.73□□□□□ -1.17
TMEM260-211ENST00000556648 IGHV4-31P0DP07 118 aa7.73□□□□□ -1.17
TMEM260-211ENST00000556648 GATA3P23771 443 aa7.73□□□□□ -1.17
TMEM260-211ENST00000556648 DEFB1P60022 68 aa7.73□□□□□ -1.17
TMEM260-211ENST00000556648 SPATA12Q7Z6I5 190 aa7.73□□□□□ -1.17
TMEM260-211ENST00000556648 GATD1Q8NB37 220 aa7.73□□□□□ -1.17
TMEM260-211ENST00000556648 AGPAT4-IT1Q9H0P7 198 aa7.73□□□□□ -1.17
TMEM260-211ENST00000556648 CLEC5AQ9NY25 188 aa7.73□□□□□ -1.17
TMEM260-211ENST00000556648 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP7.73□□□□□ -1.171e-6■■■■□ 25.3
TMEM260-211ENST00000556648 FAM181BA6NEQ2 426 aa7.73□□□□□ -1.17
TMEM260-211ENST00000556648 H3BUA1 57 aa7.73□□□□□ -1.17
TMEM260-211ENST00000556648 M0QZK8 103 aa7.73□□□□□ -1.17
TMEM260-211ENST00000556648 M0R2Z0 102 aa7.73□□□□□ -1.17
TMEM260-211ENST00000556648 EBLN2Q6P2I7 272 aa7.73□□□□□ -1.17
TMEM260-211ENST00000556648 ATP6V0BQ99437 205 aa7.73□□□□□ -1.17
TMEM260-211ENST00000556648 PAM16Q9Y3D7 125 aa7.73□□□□□ -1.17
TMEM260-211ENST00000556648 MYO18BQ8IUG5 2567 aa7.73□□□□□ -1.17
TMEM260-211ENST00000556648 UBR5O95071 2799 aaPredicted RBP7.72□□□□□ -1.17
TMEM260-211ENST00000556648 NDUFA4O00483 81 aa7.72□□□□□ -1.17
TMEM260-211ENST00000556648 LINC00173Q6ZV60 143 aa7.72□□□□□ -1.17
TMEM260-211ENST00000556648 USMG5Q96IX5 58 aa7.72□□□□□ -1.17
TMEM260-211ENST00000556648 C16orf92Q96LL3 132 aa7.72□□□□□ -1.17
TMEM260-211ENST00000556648 C11orf21Q9P2W6 132 aa7.72□□□□□ -1.17
TMEM260-211ENST00000556648 IGHV1-24A0A0C4DH33 117 aa7.71□□□□□ -1.17
TMEM260-211ENST00000556648 RBAKDNA6NC62 111 aa7.71□□□□□ -1.17
TMEM260-211ENST00000556648 BRI3O95415 125 aa7.71□□□□□ -1.17
TMEM260-211ENST00000556648 CSN3P07498 182 aa7.71□□□□□ -1.17
TMEM260-211ENST00000556648 CTRLP40313 264 aa7.71□□□□□ -1.17
TMEM260-211ENST00000556648 Q6AWC8 147 aa7.71□□□□□ -1.17
TMEM260-211ENST00000556648 AMN1Q8IY45 258 aa7.71□□□□□ -1.17
TMEM260-211ENST00000556648 ATOH7Q8N100 152 aa7.71□□□□□ -1.17
TMEM260-211ENST00000556648 NDFIP1Q9BT67 221 aa7.71□□□□□ -1.17
TMEM260-211ENST00000556648 NDUFAF3Q9BU61 184 aa7.71□□□□□ -1.17
TMEM260-211ENST00000556648 FBLL1A6NHQ2 334 aaKnown RBP7.71□□□□□ -1.18
TMEM260-211ENST00000556648 ORM1P02763 201 aa7.71□□□□□ -1.18
TMEM260-211ENST00000556648 IGLC6P0CF74 106 aa7.71□□□□□ -1.18
TMEM260-211ENST00000556648 BMI1P35226 326 aa7.71□□□□□ -1.18
TMEM260-211ENST00000556648 LOXL1Q08397 574 aaPredicted RBP7.71□□□□□ -1.18
TMEM260-211ENST00000556648 TM4SF20Q53R12 229 aa7.71□□□□□ -1.18
TMEM260-211ENST00000556648 Q5PR19 223 aa7.71□□□□□ -1.18
TMEM260-211ENST00000556648 PRR9Q5T870 116 aa7.71□□□□□ -1.18
TMEM260-211ENST00000556648 FER1L6-AS1Q8NA97 138 aa7.71□□□□□ -1.18
TMEM260-211ENST00000556648 BORCS7Q96B45 105 aa7.71□□□□□ -1.18
TMEM260-211ENST00000556648 POLQO75417 2590 aa7.7□□□□□ -1.18
TMEM260-211ENST00000556648 IGKV3-7A0A075B6H7 116 aa7.7□□□□□ -1.18
TMEM260-211ENST00000556648 J3QLI3 93 aa7.7□□□□□ -1.18
TMEM260-211ENST00000556648 SOCS3O14543 225 aa7.7□□□□□ -1.18
TMEM260-211ENST00000556648 FSHBP01225 129 aa7.7□□□□□ -1.18
TMEM260-211ENST00000556648 FOXE3Q13461 319 aa7.7□□□□□ -1.18
TMEM260-211ENST00000556648 HIST2H2BCQ6DN03 193 aa7.7□□□□□ -1.18
TMEM260-211ENST00000556648 ZNF493Q6ZR52 646 aa7.7□□□□□ -1.18
TMEM260-211ENST00000556648 ZNF738Q8NE65 137 aa7.7□□□□□ -1.18
TMEM260-211ENST00000556648 MRPL53Q96EL3 112 aaKnown RBP7.7□□□□□ -1.18
TMEM260-211ENST00000556648 VAMP8Q9BV40 100 aa7.7□□□□□ -1.18
TMEM260-211ENST00000556648 NPFFR1Q9GZQ6 430 aa7.7□□□□□ -1.18
TMEM260-211ENST00000556648 MSRB1Q9NZV6 116 aa7.7□□□□□ -1.18
TMEM260-211ENST00000556648 FAM208BQ5VWN6 2430 aa7.7□□□□□ -1.18
TMEM260-211ENST00000556648 ANKRD17O75179 2603 aaKnown RBP7.7□□□□□ -1.18
TMEM260-211ENST00000556648 MAP1AP78559 2803 aaPredicted RBP7.7□□□□□ -1.18
TMEM260-211ENST00000556648 IGKV3D-20A0A0C4DH25 116 aa7.69□□□□□ -1.18
TMEM260-211ENST00000556648 C2orf70A6NJV1 201 aa7.69□□□□□ -1.18
TMEM260-211ENST00000556648 SMKR1H3BMG3 65 aa7.69□□□□□ -1.18
TMEM260-211ENST00000556648 EREGO14944 169 aa7.69□□□□□ -1.18
TMEM260-211ENST00000556648 RPS20P60866 119 aaKnown RBP7.69□□□□□ -1.18
TMEM260-211ENST00000556648 DEFB113Q30KQ7 82 aa7.69□□□□□ -1.18
TMEM260-211ENST00000556648 MAJINQ3KP22 176 aa7.69□□□□□ -1.18
TMEM260-211ENST00000556648 KRTAP1-3Q8IUG1 177 aa7.69□□□□□ -1.18
TMEM260-211ENST00000556648 A0A1B0GW15 77 aa7.69□□□□□ -1.18
TMEM260-211ENST00000556648 FABP5P3A8MUU1 101 aa7.69□□□□□ -1.18
TMEM260-211ENST00000556648 D6R8Y8 96 aa7.69□□□□□ -1.18
TMEM260-211ENST00000556648 LINC00614P0C842 121 aa7.69□□□□□ -1.18
TMEM260-211ENST00000556648 SRD5A1P18405 259 aa7.69□□□□□ -1.18
TMEM260-211ENST00000556648 LINC01559Q495D7 138 aa7.69□□□□□ -1.18
TMEM260-211ENST00000556648 FAM106AQ4KMX7 169 aa7.69□□□□□ -1.18
TMEM260-211ENST00000556648 TMEM78Q5T7P6 136 aa7.69□□□□□ -1.18
TMEM260-211ENST00000556648 C9orf139Q6ZV77 190 aa7.69□□□□□ -1.18
TMEM260-211ENST00000556648 CHCHD1Q96BP2 118 aaKnown RBP7.69□□□□□ -1.18
TMEM260-211ENST00000556648 CSPG4Q6UVK1 2322 aa7.68□□□□□ -1.18
TMEM260-211ENST00000556648 IGHV7-4-1A0A0J9YVY3 117 aa7.68□□□□□ -1.18
TMEM260-211ENST00000556648 F6UB75 175 aa7.68□□□□□ -1.18
TMEM260-211ENST00000556648 J3KRW8 73 aa7.68□□□□□ -1.18
TMEM260-211ENST00000556648 NCR2O95944 276 aa7.68□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms