RNA–Protein interactions for RNA: ENST00000555535.1

SRP54-207, Transcript of signal recognition particle 54, humanhuman

TSL 4

Gene SRP54, Length 552 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-207ENST00000555535 H7C1C5 153 aa-0.13□□□□□ -2.43
SRP54-207ENST00000555535 PIAS1O75925 651 aa-0.13□□□□□ -2.43
SRP54-207ENST00000555535 ATP5HO75947 161 aa-0.13□□□□□ -2.43
SRP54-207ENST00000555535 ATG12O94817 140 aa-0.13□□□□□ -2.43
SRP54-207ENST00000555535 APOA2P02652 100 aa-0.13□□□□□ -2.43
SRP54-207ENST00000555535 CST2P09228 141 aa-0.13□□□□□ -2.43
SRP54-207ENST00000555535 IL7P13232 177 aa-0.13□□□□□ -2.43
SRP54-207ENST00000555535 RPL37P61927 97 aaKnown RBP-0.13□□□□□ -2.43
SRP54-207ENST00000555535 ARF6P62330 175 aa-0.13□□□□□ -2.43
SRP54-207ENST00000555535 LCN6P62502 163 aa-0.13□□□□□ -2.43
SRP54-207ENST00000555535 HBBP68871 147 aa-0.13□□□□□ -2.43
SRP54-207ENST00000555535 CCL7P80098 99 aa-0.13□□□□□ -2.43
SRP54-207ENST00000555535 REEP5Q00765 189 aa-0.13□□□□□ -2.43
SRP54-207ENST00000555535 FXYD3Q14802 87 aa-0.13□□□□□ -2.43
SRP54-207ENST00000555535 SPINK13Q1W4C9 94 aa-0.13□□□□□ -2.43
SRP54-207ENST00000555535 Q5BKY6 102 aa-0.13□□□□□ -2.43
SRP54-207ENST00000555535 XAF1Q6GPH4 301 aa-0.13□□□□□ -2.43
SRP54-207ENST00000555535 CSAG1Q6PB30 78 aa-0.13□□□□□ -2.43
SRP54-207ENST00000555535 C3orf62Q6ZUJ4 267 aa-0.13□□□□□ -2.43
SRP54-207ENST00000555535 NEK7Q8TDX7 302 aa-0.13□□□□□ -2.43
SRP54-207ENST00000555535 PRAP1Q96NZ9 151 aa-0.13□□□□□ -2.43
SRP54-207ENST00000555535 SSR3Q9UNL2 185 aa-0.13□□□□□ -2.43
SRP54-207ENST00000555535 ABCA12Q86UK0 2595 aa-0.13□□□□□ -2.43
SRP54-207ENST00000555535 UBR5O95071 2799 aaPredicted RBP-0.14□□□□□ -2.43
SRP54-207ENST00000555535 TRAV5A0A0B4J249 113 aa-0.14□□□□□ -2.43
SRP54-207ENST00000555535 BBIP1A8MTZ0 92 aa-0.14□□□□□ -2.43
SRP54-207ENST00000555535 CST7O76096 145 aa-0.14□□□□□ -2.43
SRP54-207ENST00000555535 IGHV3-33P01772 117 aa-0.14□□□□□ -2.43
SRP54-207ENST00000555535 FABP2P12104 132 aa-0.14□□□□□ -2.43
SRP54-207ENST00000555535 FABP4P15090 132 aa-0.14□□□□□ -2.43
SRP54-207ENST00000555535 EVI2AP22794 236 aa-0.14□□□□□ -2.43
SRP54-207ENST00000555535 RPL35P42766 123 aaKnown RBP-0.14□□□□□ -2.43
SRP54-207ENST00000555535 AKIRIN2Q53H80 203 aa-0.14□□□□□ -2.43
SRP54-207ENST00000555535 AKR1C8PQ5T2L2 129 aa-0.14□□□□□ -2.43
SRP54-207ENST00000555535 FKBP1CQ5VVH2 108 aa-0.14□□□□□ -2.43
SRP54-207ENST00000555535 C10orf99Q6UWK7 81 aa-0.14□□□□□ -2.43
SRP54-207ENST00000555535 LINC00269Q8N2A0 174 aa-0.14□□□□□ -2.43
SRP54-207ENST00000555535 SREK1IP1Q8N9Q2 155 aaPredicted RBP-0.14□□□□□ -2.43
SRP54-207ENST00000555535 OR5AK2Q8NH90 309 aa-0.14□□□□□ -2.43
SRP54-207ENST00000555535 FAM213BQ8TBF2 198 aa-0.14□□□□□ -2.43
SRP54-207ENST00000555535 PARVGQ9HBI0 331 aa-0.14□□□□□ -2.43
SRP54-207ENST00000555535 PRNDQ9UKY0 176 aa-0.14□□□□□ -2.43
SRP54-207ENST00000555535 PYCARDQ9ULZ3 195 aa-0.14□□□□□ -2.43
SRP54-207ENST00000555535 OTOGQ6ZRI0 2925 aa-0.15□□□□□ -2.43
SRP54-207ENST00000555535 A0A0J9YY99 117 aa-0.15□□□□□ -2.43
SRP54-207ENST00000555535 AIPO00170 330 aa-0.15□□□□□ -2.43
SRP54-207ENST00000555535 CDC42EP2O14613 210 aa-0.15□□□□□ -2.43
SRP54-207ENST00000555535 C1QBP02746 253 aa-0.15□□□□□ -2.43
SRP54-207ENST00000555535 IFNA6P05013 189 aa-0.15□□□□□ -2.43
SRP54-207ENST00000555535 ERVS71-1P61550 626 aa-0.15□□□□□ -2.43
SRP54-207ENST00000555535 SCGB2B2Q4G0G5 96 aa-0.15□□□□□ -2.43
SRP54-207ENST00000555535 C5orf56Q8N8D9 126 aa-0.15□□□□□ -2.43
SRP54-207ENST00000555535 GRPEL2Q8TAA5 225 aa-0.15□□□□□ -2.43
SRP54-207ENST00000555535 CLEC2BQ92478 149 aa-0.15□□□□□ -2.43
SRP54-207ENST00000555535 BORCS8Q96FH0 119 aa-0.15□□□□□ -2.43
SRP54-207ENST00000555535 TAF9BQ9HBM6 251 aa-0.15□□□□□ -2.43
SRP54-207ENST00000555535 BIN3Q9NQY0 253 aa-0.15□□□□□ -2.43
SRP54-207ENST00000555535 FKBP11Q9NYL4 201 aa-0.15□□□□□ -2.43
SRP54-207ENST00000555535 MED11Q9P086 117 aa-0.15□□□□□ -2.43
SRP54-207ENST00000555535 COMMD3Q9UBI1 195 aa-0.15□□□□□ -2.43
SRP54-207ENST00000555535 NISCHQ9Y2I1 1504 aa-0.15□□□□□ -2.43
SRP54-207ENST00000555535 ABCA4P78363 2273 aa-0.15□□□□□ -2.43
SRP54-207ENST00000555535 KIF13AQ9H1H9 1805 aa-0.15□□□□□ -2.43
SRP54-207ENST00000555535 CADP27708 2225 aa-0.15□□□□□ -2.43
SRP54-207ENST00000555535 SPAG17Q6Q759 2223 aa-0.15□□□□□ -2.43
SRP54-207ENST00000555535 A0A1W2PPB8 328 aa-0.16□□□□□ -2.44
SRP54-207ENST00000555535 KIR3DP1A8MWS1 328 aa-0.16□□□□□ -2.44
SRP54-207ENST00000555535 KPNA4O00629 521 aaPredicted RBP-0.16□□□□□ -2.44
SRP54-207ENST00000555535 IGKCP01834 107 aa-0.16□□□□□ -2.44
SRP54-207ENST00000555535 TRACP01848 142 aa-0.16□□□□□ -2.44
SRP54-207ENST00000555535 CSN2P05814 226 aa-0.16□□□□□ -2.44
SRP54-207ENST00000555535 GYPBP06028 91 aa-0.16□□□□□ -2.44
SRP54-207ENST00000555535 IFITM1P13164 125 aa-0.16□□□□□ -2.44
SRP54-207ENST00000555535 CAPZBP47756 277 aa-0.16□□□□□ -2.44
SRP54-207ENST00000555535 RTL8BQ17RB0 113 aa-0.16□□□□□ -2.44
SRP54-207ENST00000555535 C1orf140Q5VVS0 124 aa-0.16□□□□□ -2.44
SRP54-207ENST00000555535 VMO1Q7Z5L0 202 aa-0.16□□□□□ -2.44
SRP54-207ENST00000555535 TEX29Q8N6K0 151 aa-0.16□□□□□ -2.44
SRP54-207ENST00000555535 OR4B1Q8NGF8 309 aa-0.16□□□□□ -2.44
SRP54-207ENST00000555535 OR5H6Q8NGV6 325 aa-0.16□□□□□ -2.44
SRP54-207ENST00000555535 OR13C6PQ8NH95 151 aa-0.16□□□□□ -2.44
SRP54-207ENST00000555535 DYDC1Q8WWB3 177 aa-0.16□□□□□ -2.44
SRP54-207ENST00000555535 RTL8AQ9BWD3 113 aa-0.16□□□□□ -2.44
SRP54-207ENST00000555535 OR2H1Q9GZK4 316 aa-0.16□□□□□ -2.44
SRP54-207ENST00000555535 MRPL36Q9P0J6 103 aaKnown RBP-0.16□□□□□ -2.44
SRP54-207ENST00000555535 FGD6Q6ZV73 1430 aa-0.16□□□□□ -2.44
SRP54-207ENST00000555535 CELSR1Q9NYQ6 3014 aa-0.16□□□□□ -2.44
SRP54-207ENST00000555535 DLC1Q96QB1 1528 aa-0.17□□□□□ -2.44
SRP54-207ENST00000555535 ARFGEF1Q9Y6D6 1849 aa-0.17□□□□□ -2.44
SRP54-207ENST00000555535 A0A0G2JMM0 328 aa-0.17□□□□□ -2.44
SRP54-207ENST00000555535 NBDYA0A0U1RRE5 68 aa-0.17□□□□□ -2.44
SRP54-207ENST00000555535 TMEM30CPA0ZSE6 113 aa-0.17□□□□□ -2.44
SRP54-207ENST00000555535 ARL5CA6NH57 179 aa-0.17□□□□□ -2.44
SRP54-207ENST00000555535 TECPR2O15040 1411 aa-0.17□□□□□ -2.44
SRP54-207ENST00000555535 MFSD11O43934 449 aa-0.17□□□□□ -2.44
SRP54-207ENST00000555535 EDF1O60869 148 aaKnown RBP-0.17□□□□□ -2.44
SRP54-207ENST00000555535 PLXNA2O75051 1894 aa-0.17□□□□□ -2.44
SRP54-207ENST00000555535 IGHV3-30P01768 117 aa-0.17□□□□□ -2.44
SRP54-207ENST00000555535 TFF1P04155 84 aa-0.17□□□□□ -2.44
SRP54-207ENST00000555535 CTXN2P0C2S0 81 aa-0.17□□□□□ -2.44
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms