RNA–Protein interactions for RNA: ENST00000555386.5

PSEN1-213, Transcript of presenilin 1, humanhuman

TSL 1 (best)

Gene PSEN1, Length 1,484 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-213ENST00000555386 WFDC9Q8NEX5 89 aa7.51□□□□□ -1.21
PSEN1-213ENST00000555386 GRAMD2BQ96HH9 432 aa7.51□□□□□ -1.21
PSEN1-213ENST00000555386 FMC1Q96HJ9 113 aa7.51□□□□□ -1.21
PSEN1-213ENST00000555386 ATG101Q9BSB4 218 aa7.51□□□□□ -1.21
PSEN1-213ENST00000555386 RNASE7Q9H1E1 156 aaKnown RBP7.51□□□□□ -1.21
PSEN1-213ENST00000555386 KLK9Q9UKQ9 250 aa7.51□□□□□ -1.21
PSEN1-213ENST00000555386 ZNF705GA8MUZ8 300 aaPredicted RBP7.5□□□□□ -1.21
PSEN1-213ENST00000555386 SNURFLB1AK76 121 aa7.5□□□□□ -1.21
PSEN1-213ENST00000555386 F8W735 103 aaPredicted RBP7.5□□□□□ -1.21
PSEN1-213ENST00000555386 TSTD3H0UI37 97 aa7.5□□□□□ -1.21
PSEN1-213ENST00000555386 GATCO43716 136 aaKnown RBP7.5□□□□□ -1.21
PSEN1-213ENST00000555386 SLC25A5P05141 298 aaKnown RBP7.5□□□□□ -1.21
PSEN1-213ENST00000555386 HIST1H1EP10412 219 aaKnown RBP7.5□□□□□ -1.21
PSEN1-213ENST00000555386 PSG1P11464 419 aa7.5□□□□□ -1.21
PSEN1-213ENST00000555386 CRISP2P16562 243 aa7.5□□□□□ -1.21
PSEN1-213ENST00000555386 CBLN1P23435 193 aa7.5□□□□□ -1.21
PSEN1-213ENST00000555386 RANP62826 216 aaKnown RBP7.5□□□□□ -1.21
PSEN1-213ENST00000555386 KLF5Q13887 457 aaPredicted RBP7.5□□□□□ -1.21
PSEN1-213ENST00000555386 FAM106AQ4KMX7 169 aa7.5□□□□□ -1.21
PSEN1-213ENST00000555386 FAM209BQ5JX69 171 aa7.5□□□□□ -1.21
PSEN1-213ENST00000555386 OR9G4Q8NGQ1 327 aa7.5□□□□□ -1.21
PSEN1-213ENST00000555386 GPR82Q96P67 336 aa7.5□□□□□ -1.21
PSEN1-213ENST00000555386 OTORQ9NRC9 128 aa7.5□□□□□ -1.21
PSEN1-213ENST00000555386 MRPL27Q9P0M9 148 aaKnown RBP7.5□□□□□ -1.21
PSEN1-213ENST00000555386 TRBV6-1A0A0K0K1D8 114 aa7.49□□□□□ -1.21
PSEN1-213ENST00000555386 PGPA6NDG6 321 aa7.49□□□□□ -1.21
PSEN1-213ENST00000555386 TOMM40O96008 361 aa7.49□□□□□ -1.21
PSEN1-213ENST00000555386 RD3LP0DJH9 198 aa7.49□□□□□ -1.21
PSEN1-213ENST00000555386 IQCJQ1A5X6 159 aa7.49□□□□□ -1.21
PSEN1-213ENST00000555386 TM4SF20Q53R12 229 aa7.49□□□□□ -1.21
PSEN1-213ENST00000555386 CT83Q5H943 113 aa7.49□□□□□ -1.21
PSEN1-213ENST00000555386 OR10J3Q5JRS4 329 aa7.49□□□□□ -1.21
PSEN1-213ENST00000555386 C9orf66Q5T8R8 295 aa7.49□□□□□ -1.21
PSEN1-213ENST00000555386 UNQ9165/PRO28630Q6UXU0 137 aa7.49□□□□□ -1.21
PSEN1-213ENST00000555386 TMEM136Q6ZRR5 245 aa7.49□□□□□ -1.21
PSEN1-213ENST00000555386 LYPD1Q8N2G4 141 aa7.49□□□□□ -1.21
PSEN1-213ENST00000555386 CMTM2Q8TAZ6 248 aa7.49□□□□□ -1.21
PSEN1-213ENST00000555386 MCRIP2Q9BUT9 160 aaKnown RBP7.49□□□□□ -1.21
PSEN1-213ENST00000555386 SLC25A39Q9BZJ4 359 aaPredicted RBP7.49□□□□□ -1.21
PSEN1-213ENST00000555386 ZNF492Q9P255 531 aa7.49□□□□□ -1.21
PSEN1-213ENST00000555386 IGHV3-49A0A0A0MS15 119 aa7.49□□□□□ -1.21
PSEN1-213ENST00000555386 SCGB2A1O75556 95 aa7.49□□□□□ -1.21
PSEN1-213ENST00000555386 LTAP01374 205 aa7.49□□□□□ -1.21
PSEN1-213ENST00000555386 IGKV1-17P01599 117 aa7.49□□□□□ -1.21
PSEN1-213ENST00000555386 TCRAP04437 139 aa7.49□□□□□ -1.21
PSEN1-213ENST00000555386 CTSGP08311 255 aa7.49□□□□□ -1.21
PSEN1-213ENST00000555386 LYZP61626 148 aa7.49□□□□□ -1.21
PSEN1-213ENST00000555386 USF2Q15853 346 aaPredicted RBP7.49□□□□□ -1.21
PSEN1-213ENST00000555386 CDPF1Q6NVV7 123 aa7.49□□□□□ -1.21
PSEN1-213ENST00000555386 ZNF600Q6ZNG1 722 aa7.49□□□□□ -1.21
PSEN1-213ENST00000555386 ATP5L2Q7Z4Y8 100 aa7.49□□□□□ -1.21
PSEN1-213ENST00000555386 TSKUQ8WUA8 353 aa7.49□□□□□ -1.21
PSEN1-213ENST00000555386 BLNKQ8WV28 456 aa7.49□□□□□ -1.21
PSEN1-213ENST00000555386 TXN2Q99757 166 aa7.49□□□□□ -1.21
PSEN1-213ENST00000555386 SHANK2-AS3Q9BTD1 123 aa7.49□□□□□ -1.21
PSEN1-213ENST00000555386 MLST8Q9BVC4 326 aa7.49□□□□□ -1.21
PSEN1-213ENST00000555386 Q9H3A6 140 aa7.49□□□□□ -1.21
PSEN1-213ENST00000555386 ZNF331Q9NQX6 463 aaPredicted RBP7.49□□□□□ -1.21
PSEN1-213ENST00000555386 NAT8BQ9UHF3 227 aa7.49□□□□□ -1.21
PSEN1-213ENST00000555386 H3BRN7 92 aa7.48□□□□□ -1.21
PSEN1-213ENST00000555386 RELQ04864 619 aaPredicted RBP7.48□□□□□ -1.21
PSEN1-213ENST00000555386 BPIFA4PQ86YQ2 179 aa7.48□□□□□ -1.21
PSEN1-213ENST00000555386 GPHB5Q86YW7 130 aa7.48□□□□□ -1.21
PSEN1-213ENST00000555386 TMEM256Q8N2U0 113 aa7.48□□□□□ -1.21
PSEN1-213ENST00000555386 NUDT10Q8NFP7 164 aa7.48□□□□□ -1.21
PSEN1-213ENST00000555386 DYNLRB2Q8TF09 96 aa7.48□□□□□ -1.21
PSEN1-213ENST00000555386 NUDT11Q96G61 164 aa7.48□□□□□ -1.21
PSEN1-213ENST00000555386 LINC00479Q96M42 142 aa7.48□□□□□ -1.21
PSEN1-213ENST00000555386 PEMTQ9UBM1 199 aa7.48□□□□□ -1.21
PSEN1-213ENST00000555386 IGHV3OR16-13A0A075B7E8 117 aa7.47□□□□□ -1.21
PSEN1-213ENST00000555386 IGHV3-74A0A0B4J1X5 117 aa7.47□□□□□ -1.21
PSEN1-213ENST00000555386 TRAV34A0A0B4J273 112 aa7.47□□□□□ -1.21
PSEN1-213ENST00000555386 WI2-2373I1.2A0A1W2PRP0 233 aa7.47□□□□□ -1.21
PSEN1-213ENST00000555386 FAM231BA6NCW3 169 aa7.47□□□□□ -1.21
PSEN1-213ENST00000555386 C2orf70A6NJV1 201 aa7.47□□□□□ -1.21
PSEN1-213ENST00000555386 CSN3P07498 182 aa7.47□□□□□ -1.21
PSEN1-213ENST00000555386 S100A7P31151 101 aa7.47□□□□□ -1.21
PSEN1-213ENST00000555386 KRTAP10-11P60412 298 aa7.47□□□□□ -1.21
PSEN1-213ENST00000555386 RAB4BP61018 213 aa7.47□□□□□ -1.21
PSEN1-213ENST00000555386 GNG5P63218 68 aa7.47□□□□□ -1.21
PSEN1-213ENST00000555386 DEFA6Q01524 100 aa7.47□□□□□ -1.21
PSEN1-213ENST00000555386 BEAN1Q3B7T3 259 aa7.47□□□□□ -1.21
PSEN1-213ENST00000555386 BAGE3Q86Y29 109 aa7.47□□□□□ -1.21
PSEN1-213ENST00000555386 GFRA4Q9GZZ7 299 aa7.47□□□□□ -1.21
PSEN1-213ENST00000555386 TP53TG3Q9ULZ0 132 aa7.47□□□□□ -1.21
PSEN1-213ENST00000555386 FBN3Q75N90 2809 aa7.46□□□□□ -1.21
PSEN1-213ENST00000555386 IGHV3-66A0A0C4DH42 116 aa7.46□□□□□ -1.22
PSEN1-213ENST00000555386 GRIFINA4D1Z8 144 aa7.46□□□□□ -1.22
PSEN1-213ENST00000555386 A8MWL6 223 aa7.46□□□□□ -1.22
PSEN1-213ENST00000555386 NDUFA4O00483 81 aa7.46□□□□□ -1.22
PSEN1-213ENST00000555386 APCSP02743 223 aa7.46□□□□□ -1.22
PSEN1-213ENST00000555386 DDTP30046 118 aa7.46□□□□□ -1.22
PSEN1-213ENST00000555386 FCGR2BP31994 310 aaPredicted RBP7.46□□□□□ -1.22
PSEN1-213ENST00000555386 PDE6HQ13956 83 aa7.46□□□□□ -1.22
PSEN1-213ENST00000555386 TOMM20LQ6UXN7 152 aa7.46□□□□□ -1.22
PSEN1-213ENST00000555386 ARL6IP6Q8N6S5 226 aa7.46□□□□□ -1.22
PSEN1-213ENST00000555386 NHLRC2Q8NBF2 726 aa7.46□□□□□ -1.22
PSEN1-213ENST00000555386 OR4B1Q8NGF8 309 aa7.46□□□□□ -1.22
PSEN1-213ENST00000555386 RNF125Q96EQ8 232 aa7.46□□□□□ -1.22
PSEN1-213ENST00000555386 PRR25Q96S07 402 aa7.46□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms