RNA–Protein interactions for RNA: ENST00000555067.1

VRK1-203, Transcript of vaccinia related kinase 1, humanhuman

TSL 3

Gene VRK1, Length 604 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-203ENST00000555067 LSM2Q9Y333 95 aaKnown RBP2.64□□□□□ -1.99
VRK1-203ENST00000555067 MBD5Q9P267 1494 aa2.64□□□□□ -1.99
VRK1-203ENST00000555067 MYH6P13533 1939 aa2.64□□□□□ -1.99
VRK1-203ENST00000555067 TMEM2Q9UHN6 1383 aa2.63□□□□□ -1.99
VRK1-203ENST00000555067 COL4A2P08572 1712 aa2.63□□□□□ -1.99
VRK1-203ENST00000555067 RGS12O14924 1447 aa2.63□□□□□ -1.99
VRK1-203ENST00000555067 C5orf67F2Z3F1 127 aa2.63□□□□□ -1.99
VRK1-203ENST00000555067 P0C880 135 aa2.63□□□□□ -1.99
VRK1-203ENST00000555067 PCBD1P61457 104 aa2.63□□□□□ -1.99
VRK1-203ENST00000555067 IZUMO2Q6UXV1 221 aa2.63□□□□□ -1.99
VRK1-203ENST00000555067 MUCL1Q96DR8 90 aa2.63□□□□□ -1.99
VRK1-203ENST00000555067 METTL1Q9UBP6 276 aaKnown RBP2.63□□□□□ -1.99
VRK1-203ENST00000555067 NCKAP5O14513 1909 aa2.63□□□□□ -1.99
VRK1-203ENST00000555067 MYH1P12882 1939 aa2.63□□□□□ -1.99
VRK1-203ENST00000555067 MYLKQ15746 1914 aa2.63□□□□□ -1.99
VRK1-203ENST00000555067 MICAL3Q7RTP6 2002 aa2.63□□□□□ -1.99
VRK1-203ENST00000555067 FAM135AQ9P2D6 1515 aa2.63□□□□□ -1.99
VRK1-203ENST00000555067 TRAV12-1A0A0B4J245 112 aa2.62□□□□□ -1.99
VRK1-203ENST00000555067 LOC100130705A0A1B0GUX0 176 aa2.62□□□□□ -1.99
VRK1-203ENST00000555067 TRACP01848 142 aa2.62□□□□□ -1.99
VRK1-203ENST00000555067 GUCA1AP43080 201 aaPredicted RBP2.62□□□□□ -1.99
VRK1-203ENST00000555067 DSCR4P56555 118 aaPredicted RBP2.62□□□□□ -1.99
VRK1-203ENST00000555067 OCIAD2Q56VL3 154 aa2.62□□□□□ -1.99
VRK1-203ENST00000555067 OR5AK2Q8NH90 309 aa2.62□□□□□ -1.99
VRK1-203ENST00000555067 OTOSQ8NHW6 89 aa2.62□□□□□ -1.99
VRK1-203ENST00000555067 TMEM254Q8TBM7 123 aa2.62□□□□□ -1.99
VRK1-203ENST00000555067 TMEM191AQ9H0A3 160 aa2.62□□□□□ -1.99
VRK1-203ENST00000555067 SLC35B3Q9H1N7 401 aa2.62□□□□□ -1.99
VRK1-203ENST00000555067 CST9LQ9H4G1 147 aa2.62□□□□□ -1.99
VRK1-203ENST00000555067 RTEL1-TNFRSF6BF6WH68 1400 aa2.61□□□□□ -1.99
VRK1-203ENST00000555067 FGD6Q6ZV73 1430 aa2.61□□□□□ -1.99
VRK1-203ENST00000555067 MGAMO43451 1857 aa2.61□□□□□ -1.99
VRK1-203ENST00000555067 USP54Q70EL1 1684 aa2.61□□□□□ -1.99
VRK1-203ENST00000555067 BCL9LQ86UU0 1499 aa2.61□□□□□ -1.99
VRK1-203ENST00000555067 A0A0G2JMM0 328 aa2.61□□□□□ -1.99
VRK1-203ENST00000555067 A0A1W2PPB8 328 aa2.61□□□□□ -1.99
VRK1-203ENST00000555067 C2orf70A6NJV1 201 aa2.61□□□□□ -1.99
VRK1-203ENST00000555067 KIR3DP1A8MWS1 328 aa2.61□□□□□ -1.99
VRK1-203ENST00000555067 E7EUB6 86 aa2.61□□□□□ -1.99
VRK1-203ENST00000555067 IGLV3-19P01714 112 aa2.61□□□□□ -1.99
VRK1-203ENST00000555067 ARPINQ7Z6K5 226 aa2.61□□□□□ -1.99
VRK1-203ENST00000555067 FAM19A2Q8N3H0 131 aa2.61□□□□□ -1.99
VRK1-203ENST00000555067 PSMF1Q92530 271 aa2.61□□□□□ -1.99
VRK1-203ENST00000555067 CST11Q9H112 138 aa2.61□□□□□ -1.99
VRK1-203ENST00000555067 SOX21Q9Y651 276 aaPredicted RBP2.61□□□□□ -1.99
VRK1-203ENST00000555067 MYH13Q9UKX3 1938 aa2.61□□□□□ -1.99
VRK1-203ENST00000555067 RP1P56715 2156 aa2.61□□□□□ -1.99
VRK1-203ENST00000555067 MYO9BQ13459 2157 aa2.61□□□□□ -1.99
VRK1-203ENST00000555067 COL11A1P12107 1806 aaPredicted RBP2.61□□□□□ -1.99
VRK1-203ENST00000555067 COL1A2P08123 1366 aa2.61□□□□□ -1.99
VRK1-203ENST00000555067 MPDZO75970 2070 aa2.61□□□□□ -1.99
VRK1-203ENST00000555067 ADGRB3O60242 1522 aa2.6□□□□□ -1.99
VRK1-203ENST00000555067 C9orf170A2RU37 121 aa2.6□□□□□ -1.99
VRK1-203ENST00000555067 F6UZH7 168 aa2.6□□□□□ -1.99
VRK1-203ENST00000555067 CIRBPQ14011 172 aaKnown RBP2.6□□□□□ -1.99
VRK1-203ENST00000555067 CCSMST1Q4G0I0 132 aa2.6□□□□□ -1.99
VRK1-203ENST00000555067 CLECL1Q8IZS7 167 aa2.6□□□□□ -1.99
VRK1-203ENST00000555067 OR5AS1Q8N127 324 aa2.6□□□□□ -1.99
VRK1-203ENST00000555067 C10orf111Q8N326 155 aa2.6□□□□□ -1.99
VRK1-203ENST00000555067 HEATR5BQ9P2D3 2071 aa2.6□□□□□ -1.99
VRK1-203ENST00000555067 KIAA1549Q9HCM3 1950 aa2.6□□□□□ -1.99
VRK1-203ENST00000555067 COL24A1Q17RW2 1714 aa2.59□□□□□ -1.99
VRK1-203ENST00000555067 KIF13AQ9H1H9 1805 aa2.59□□□□□ -1.99
VRK1-203ENST00000555067 TRBV20-1A0A075B6N2 111 aa2.59□□□□□ -1.99
VRK1-203ENST00000555067 IGKV1D-17A0A075B6S4 117 aa2.59□□□□□ -1.99
VRK1-203ENST00000555067 A0A087WSZ3 146 aa2.59□□□□□ -1.99
VRK1-203ENST00000555067 SPAARA0A1B0GVQ0 90 aa2.59□□□□□ -1.99
VRK1-203ENST00000555067 TCRBV4S1A1TA0A5B7 111 aa2.59□□□□□ -1.99
VRK1-203ENST00000555067 A6NN06 94 aa2.59□□□□□ -1.99
VRK1-203ENST00000555067 APODP05090 189 aa2.59□□□□□ -1.99
VRK1-203ENST00000555067 CD2P06729 351 aa2.59□□□□□ -1.99
VRK1-203ENST00000555067 CKS2P33552 79 aa2.59□□□□□ -1.99
VRK1-203ENST00000555067 ELOBQ15370 118 aa2.59□□□□□ -1.99
VRK1-203ENST00000555067 LINC00269Q8N2A0 174 aa2.59□□□□□ -1.99
VRK1-203ENST00000555067 Q8N2B8 174 aa2.59□□□□□ -1.99
VRK1-203ENST00000555067 ZNF436-AS1Q8NC38 126 aaPredicted RBP2.59□□□□□ -1.99
VRK1-203ENST00000555067 SFT2D1Q8WV19 159 aa2.59□□□□□ -1.99
VRK1-203ENST00000555067 TCEAL7Q9BRU2 100 aa2.59□□□□□ -1.99
VRK1-203ENST00000555067 PXDNLA1KZ92 1463 aa2.58□□□□□ -2
VRK1-203ENST00000555067 SCN3AQ9NY46 2000 aa2.58□□□□□ -2
VRK1-203ENST00000555067 COL4A5P29400 1685 aa2.58□□□□□ -2
VRK1-203ENST00000555067 TRAV10A0A0B4J240 114 aa2.58□□□□□ -2
VRK1-203ENST00000555067 C3orf85A0A1B0GTC6 90 aa2.58□□□□□ -2
VRK1-203ENST00000555067 PNMA8CA0A1B0GUJ8 204 aa2.58□□□□□ -2
VRK1-203ENST00000555067 BBIP1A8MTZ0 92 aa2.58□□□□□ -2
VRK1-203ENST00000555067 CDC42EP2O14613 210 aa2.58□□□□□ -2
VRK1-203ENST00000555067 RBP4P02753 201 aa2.58□□□□□ -2
VRK1-203ENST00000555067 ETV6P41212 452 aa2.58□□□□□ -2
VRK1-203ENST00000555067 HCP5Q6MZN7 132 aa2.58□□□□□ -2
VRK1-203ENST00000555067 IDO2Q6ZQW0 420 aa2.58□□□□□ -2
VRK1-203ENST00000555067 Q8TAT8 98 aa2.58□□□□□ -2
VRK1-203ENST00000555067 CCDC167Q9P0B6 97 aa2.58□□□□□ -2
VRK1-203ENST00000555067 WDR97A6NE52 1622 aa2.57□□□□□ -2
VRK1-203ENST00000555067 TRGV4A0A0C4DH28 118 aa2.57□□□□□ -2
VRK1-203ENST00000555067 LOC107984156A0A0G2JMH3 177 aa2.57□□□□□ -2
VRK1-203ENST00000555067 H3BRN7 92 aa2.57□□□□□ -2
VRK1-203ENST00000555067 ERC2-IT1O76042 136 aa2.57□□□□□ -2
VRK1-203ENST00000555067 PYYP10082 97 aa2.57□□□□□ -2
VRK1-203ENST00000555067 PDE6HQ13956 83 aa2.57□□□□□ -2
VRK1-203ENST00000555067 Q1T7F1 81 aa2.57□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 89.9 ms