RNA–Protein interactions for RNA: ENST00000555022.5

SYNE2-217, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 1 (best)

Gene SYNE2, Length 3,396 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-217ENST00000555022 FTH1P19P0C7X4 201 aa6.99□□□□□ -1.29
SYNE2-217ENST00000555022 MZT1Q08AG7 82 aa6.99□□□□□ -1.29
SYNE2-217ENST00000555022 SYT8Q8NBV8 401 aa6.99□□□□□ -1.29
SYNE2-217ENST00000555022 ZNF436-AS1Q8NC38 126 aaPredicted RBP6.99□□□□□ -1.29
SYNE2-217ENST00000555022 OR5A1Q8NGJ0 315 aa6.99□□□□□ -1.29
SYNE2-217ENST00000555022 NDUFB3O43676 98 aa6.99□□□□□ -1.29
SYNE2-217ENST00000555022 IGKV1-17P01599 117 aa6.99□□□□□ -1.29
SYNE2-217ENST00000555022 POU2AF1Q16633 256 aa6.99□□□□□ -1.29
SYNE2-217ENST00000555022 ZNF833PQ6ZTB9 187 aa6.99□□□□□ -1.29
SYNE2-217ENST00000555022 OR4X2Q8NGF9 303 aa6.99□□□□□ -1.29
SYNE2-217ENST00000555022 A0A1B0GV72 72 aa6.98□□□□□ -1.29
SYNE2-217ENST00000555022 MT-ATP8P03928 68 aa6.98□□□□□ -1.29
SYNE2-217ENST00000555022 RPS20P60866 119 aaKnown RBP6.98□□□□□ -1.29
SYNE2-217ENST00000555022 CR1LQ2VPA4 569 aa6.98□□□□□ -1.29
SYNE2-217ENST00000555022 SPANXB1Q9NS25 103 aaPredicted RBP6.98□□□□□ -1.29
SYNE2-217ENST00000555022 TRBV19A0A075B6N1 114 aa6.98□□□□□ -1.29
SYNE2-217ENST00000555022 IGLL5B9A064 214 aa6.98□□□□□ -1.29
SYNE2-217ENST00000555022 LHBP01229 141 aa6.98□□□□□ -1.29
SYNE2-217ENST00000555022 IGKCP01834 107 aa6.98□□□□□ -1.29
SYNE2-217ENST00000555022 SEM1Q6ZVN7 128 aa6.98□□□□□ -1.29
SYNE2-217ENST00000555022 C3orf56Q8N813 242 aa6.98□□□□□ -1.29
SYNE2-217ENST00000555022 THAP8Q8NA92 274 aa6.98□□□□□ -1.29
SYNE2-217ENST00000555022 OR9G4Q8NGQ1 327 aa6.98□□□□□ -1.29
SYNE2-217ENST00000555022 ZNF502Q8TBZ5 544 aa6.98□□□□□ -1.29
SYNE2-217ENST00000555022 DYNLRB1Q9NP97 96 aa6.98□□□□□ -1.29
SYNE2-217ENST00000555022 SOX21Q9Y651 276 aaPredicted RBP6.98□□□□□ -1.29
SYNE2-217ENST00000555022 WI2-2373I1.2A0A1W2PRP0 233 aa6.97□□□□□ -1.29
SYNE2-217ENST00000555022 PRR33A8MZF0 331 aa6.97□□□□□ -1.29
SYNE2-217ENST00000555022 PRAC2D3DTV9 90 aa6.97□□□□□ -1.29
SYNE2-217ENST00000555022 LGALS9BQ3B8N2 356 aa6.97□□□□□ -1.29
SYNE2-217ENST00000555022 CD300EQ496F6 205 aaPredicted RBP6.97□□□□□ -1.29
SYNE2-217ENST00000555022 GAGE13Q4V321 117 aa6.97□□□□□ -1.29
SYNE2-217ENST00000555022 LGALS9CQ6DKI2 356 aa6.97□□□□□ -1.29
SYNE2-217ENST00000555022 SIGLEC15Q6ZMC9 328 aa6.97□□□□□ -1.29
SYNE2-217ENST00000555022 C1orf210Q8IVY1 113 aa6.97□□□□□ -1.29
SYNE2-217ENST00000555022 VKORC1Q9BQB6 163 aa6.97□□□□□ -1.29
SYNE2-217ENST00000555022 MAP1LC3AQ9H492 121 aa6.97□□□□□ -1.29
SYNE2-217ENST00000555022 AAMDCQ9H7C9 122 aa6.97□□□□□ -1.29
SYNE2-217ENST00000555022 GEMIN7Q9H840 131 aaKnown RBP6.97□□□□□ -1.29
SYNE2-217ENST00000555022 ONECUT1Q9UBC0 465 aa6.97□□□□□ -1.29
SYNE2-217ENST00000555022 CELSR1Q9NYQ6 3014 aa6.97□□□□□ -1.29
SYNE2-217ENST00000555022 HLA-DRB4P13762 266 aa6.97□□□□□ -1.29
SYNE2-217ENST00000555022 KLRD1Q13241 179 aa6.97□□□□□ -1.29
SYNE2-217ENST00000555022 RNF125Q96EQ8 232 aa6.97□□□□□ -1.29
SYNE2-217ENST00000555022 KIR2DL4Q99706 377 aa6.97□□□□□ -1.29
SYNE2-217ENST00000555022 SCNM1Q9BWG6 230 aa6.97□□□□□ -1.29
SYNE2-217ENST00000555022 MRPL16Q9NX20 251 aaKnown RBP6.97□□□□□ -1.29
SYNE2-217ENST00000555022 LINC00312Q9Y6C7 94 aa6.97□□□□□ -1.29
SYNE2-217ENST00000555022 HLA-DRB4X5D2U9 266 aa6.97□□□□□ -1.29
SYNE2-217ENST00000555022 NCBP2LA6PVI3 153 aaKnown RBP6.97□□□□□ -1.29
SYNE2-217ENST00000555022 CD40P25942 277 aa6.97□□□□□ -1.29
SYNE2-217ENST00000555022 GLRXP35754 106 aa6.97□□□□□ -1.29
SYNE2-217ENST00000555022 ARL3P36405 182 aa6.97□□□□□ -1.29
SYNE2-217ENST00000555022 ODF1Q14990 250 aa6.97□□□□□ -1.29
SYNE2-217ENST00000555022 ZNF562Q6V9R5 426 aa6.97□□□□□ -1.29
SYNE2-217ENST00000555022 TRGV9Q99603 122 aa6.97□□□□□ -1.29
SYNE2-217ENST00000555022 PGPEP1Q9NXJ5 209 aa6.97□□□□□ -1.29
SYNE2-217ENST00000555022 DKK4Q9UBT3 224 aa6.97□□□□□ -1.29
SYNE2-217ENST00000555022 DOPEY2Q9Y3R5 2298 aa6.97□□□□□ -1.29
SYNE2-217ENST00000555022 OVOL3O00110 214 aa6.96□□□□□ -1.29
SYNE2-217ENST00000555022 TNFRSF6BO95407 300 aa6.96□□□□□ -1.29
SYNE2-217ENST00000555022 IGLV1-44P01699 117 aa6.96□□□□□ -1.29
SYNE2-217ENST00000555022 C12orf74Q32Q52 190 aa6.96□□□□□ -1.29
SYNE2-217ENST00000555022 CT83Q5H943 113 aa6.96□□□□□ -1.29
SYNE2-217ENST00000555022 SCGB1D4Q6XE38 83 aa6.96□□□□□ -1.29
SYNE2-217ENST00000555022 ZFP2Q6ZN57 461 aa6.96□□□□□ -1.29
SYNE2-217ENST00000555022 RPEQ96AT9 228 aa6.96□□□□□ -1.29
SYNE2-217ENST00000555022 RAB9BQ9NP90 201 aa6.96□□□□□ -1.29
SYNE2-217ENST00000555022 SPINK8P0C7L1 97 aa6.96□□□□□ -1.3
SYNE2-217ENST00000555022 PPP1R27Q86WC6 154 aa6.96□□□□□ -1.3
SYNE2-217ENST00000555022 KLHL30-AS1Q8NEE0 82 aa6.96□□□□□ -1.3
SYNE2-217ENST00000555022 GFRA4Q9GZZ7 299 aa6.96□□□□□ -1.3
SYNE2-217ENST00000555022 SIGLEC9Q9Y336 463 aa6.96□□□□□ -1.3
SYNE2-217ENST00000555022 IGHV3-64A0A075B6Q5 118 aa6.95□□□□□ -1.3
SYNE2-217ENST00000555022 SMIM17P0DL12 118 aa6.95□□□□□ -1.3
SYNE2-217ENST00000555022 CEND1Q8N111 149 aa6.95□□□□□ -1.3
SYNE2-217ENST00000555022 MRGPRG-AS1Q2M3A8 158 aa6.95□□□□□ -1.3
SYNE2-217ENST00000555022 IL17RELQ6ZVW7 336 aa6.95□□□□□ -1.3
SYNE2-217ENST00000555022 BEX4Q9NWD9 120 aaPredicted RBP6.95□□□□□ -1.3
SYNE2-217ENST00000555022 K7EM74 188 aa6.95□□□□□ -1.3
SYNE2-217ENST00000555022 M0R381 172 aa6.95□□□□□ -1.3
SYNE2-217ENST00000555022 DPM2O94777 84 aa6.95□□□□□ -1.3
SYNE2-217ENST00000555022 PRTN3P24158 256 aa6.95□□□□□ -1.3
SYNE2-217ENST00000555022 SRSF9Q13242 221 aaKnown RBP eCLIP6.95□□□□□ -1.3
SYNE2-217ENST00000555022 LINC01549A6NIU2 74 aa6.94□□□□□ -1.3
SYNE2-217ENST00000555022 J3QR89 54 aa6.94□□□□□ -1.3
SYNE2-217ENST00000555022 MGPP08493 103 aa6.94□□□□□ -1.3
SYNE2-217ENST00000555022 BSPH1Q075Z2 132 aa6.94□□□□□ -1.3
SYNE2-217ENST00000555022 TIMM23O14925 209 aa6.94□□□□□ -1.3
SYNE2-217ENST00000555022 TTC9CQ8N5M4 171 aa6.94□□□□□ -1.3
SYNE2-217ENST00000555022 RNF183Q96D59 192 aa6.94□□□□□ -1.3
SYNE2-217ENST00000555022 LOXP28300 417 aaPredicted RBP6.94□□□□□ -1.3
SYNE2-217ENST00000555022 HHLA3Q9XRX5 114 aa6.94□□□□□ -1.3
SYNE2-217ENST00000555022 TEX22C9J3V5 150 aa6.93□□□□□ -1.3
SYNE2-217ENST00000555022 IGHV1-8P0DP01 117 aa6.93□□□□□ -1.3
SYNE2-217ENST00000555022 NDPQ00604 133 aa6.93□□□□□ -1.3
SYNE2-217ENST00000555022 DYNAPQ8N1N2 210 aa6.93□□□□□ -1.3
SYNE2-217ENST00000555022 ZNF491Q8N8L2 437 aa6.93□□□□□ -1.3
SYNE2-217ENST00000555022 SHANK2-AS3Q9BTD1 123 aa6.93□□□□□ -1.3
SYNE2-217ENST00000555022 SPRY4Q9C004 299 aa6.93□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms