RNA–Protein interactions for RNA: ENST00000554707.1

PCNX1-208, Transcript of pecanex 1, humanhuman

TSL 3

Gene PCNX1, Length 475 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX1-208ENST00000554707 IGHV3-30P01768 117 aa-0.13□□□□□ -2.43
PCNX1-208ENST00000554707 IGHV3-30-5P0DP03 117 aa-0.13□□□□□ -2.43
PCNX1-208ENST00000554707 EVI2AP22794 236 aa-0.13□□□□□ -2.43
PCNX1-208ENST00000554707 MRPS36P82909 103 aaKnown RBP-0.13□□□□□ -2.43
PCNX1-208ENST00000554707 DHRS4L2Q6PKH6 230 aa-0.13□□□□□ -2.43
PCNX1-208ENST00000554707 C3orf62Q6ZUJ4 267 aa-0.13□□□□□ -2.43
PCNX1-208ENST00000554707 PHF5AQ7RTV0 110 aaKnown RBP-0.13□□□□□ -2.43
PCNX1-208ENST00000554707 ANGPTL5Q86XS5 388 aa-0.13□□□□□ -2.43
PCNX1-208ENST00000554707 OR5AK2Q8NH90 309 aa-0.13□□□□□ -2.43
PCNX1-208ENST00000554707 MED11Q9P086 117 aa-0.13□□□□□ -2.43
PCNX1-208ENST00000554707 IGSF10Q6WRI0 2623 aa-0.14□□□□□ -2.43
PCNX1-208ENST00000554707 BBIP1A8MTZ0 92 aa-0.14□□□□□ -2.43
PCNX1-208ENST00000554707 KPNA4O00629 521 aaPredicted RBP-0.14□□□□□ -2.43
PCNX1-208ENST00000554707 IFNA1P01562 189 aa-0.14□□□□□ -2.43
PCNX1-208ENST00000554707 CSN2P05814 226 aa-0.14□□□□□ -2.43
PCNX1-208ENST00000554707 FABP2P12104 132 aa-0.14□□□□□ -2.43
PCNX1-208ENST00000554707 RPL37P61927 97 aaKnown RBP-0.14□□□□□ -2.43
PCNX1-208ENST00000554707 LTC4SQ16873 150 aa-0.14□□□□□ -2.43
PCNX1-208ENST00000554707 BORCS8Q96FH0 119 aa-0.14□□□□□ -2.43
PCNX1-208ENST00000554707 GINS3Q9BRX5 216 aa-0.14□□□□□ -2.43
PCNX1-208ENST00000554707 TAF9BQ9HBM6 251 aa-0.14□□□□□ -2.43
PCNX1-208ENST00000554707 OTORQ9NRC9 128 aa-0.14□□□□□ -2.43
PCNX1-208ENST00000554707 CD109Q6YHK3 1445 aa-0.14□□□□□ -2.43
PCNX1-208ENST00000554707 LOC101927531A0A1B0GV80 90 aa-0.15□□□□□ -2.43
PCNX1-208ENST00000554707 H3BQV1 296 aa-0.15□□□□□ -2.43
PCNX1-208ENST00000554707 MFSD11O43934 449 aa-0.15□□□□□ -2.43
PCNX1-208ENST00000554707 TRACP01848 142 aa-0.15□□□□□ -2.43
PCNX1-208ENST00000554707 GYPBP06028 91 aa-0.15□□□□□ -2.43
PCNX1-208ENST00000554707 GLRXP35754 106 aa-0.15□□□□□ -2.43
PCNX1-208ENST00000554707 FXYD3Q14802 87 aa-0.15□□□□□ -2.43
PCNX1-208ENST00000554707 SREK1IP1Q8N9Q2 155 aaPredicted RBP-0.15□□□□□ -2.43
PCNX1-208ENST00000554707 OR4B1Q8NGF8 309 aa-0.15□□□□□ -2.43
PCNX1-208ENST00000554707 CARD19Q96LW7 228 aa-0.15□□□□□ -2.43
PCNX1-208ENST00000554707 N4BP2Q86UW6 1770 aaPredicted RBP-0.15□□□□□ -2.43
PCNX1-208ENST00000554707 A0A1W2PPB8 328 aa-0.16□□□□□ -2.44
PCNX1-208ENST00000554707 KIR3DP1A8MWS1 328 aa-0.16□□□□□ -2.44
PCNX1-208ENST00000554707 S100A6P06703 90 aa-0.16□□□□□ -2.44
PCNX1-208ENST00000554707 NDUFA6P56556 154 aa-0.16□□□□□ -2.44
PCNX1-208ENST00000554707 RPL19P84098 196 aaKnown RBP-0.16□□□□□ -2.44
PCNX1-208ENST00000554707 SMIM20Q8N5G0 67 aa-0.16□□□□□ -2.44
PCNX1-208ENST00000554707 TMEM229BQ8NBD8 167 aa-0.16□□□□□ -2.44
PCNX1-208ENST00000554707 MNS1Q8NEH6 495 aa-0.16□□□□□ -2.44
PCNX1-208ENST00000554707 NUP35Q8NFH5 326 aa-0.16□□□□□ -2.44
PCNX1-208ENST00000554707 OR5H6Q8NGV6 325 aa-0.16□□□□□ -2.44
PCNX1-208ENST00000554707 DYDC1Q8WWB3 177 aa-0.16□□□□□ -2.44
PCNX1-208ENST00000554707 CLEC2BQ92478 149 aa-0.16□□□□□ -2.44
PCNX1-208ENST00000554707 CHMP6Q96FZ7 201 aa-0.16□□□□□ -2.44
PCNX1-208ENST00000554707 CIB3Q96Q77 187 aaPredicted RBP-0.16□□□□□ -2.44
PCNX1-208ENST00000554707 FKBP11Q9NYL4 201 aa-0.16□□□□□ -2.44
PCNX1-208ENST00000554707 MRPL36Q9P0J6 103 aaKnown RBP-0.16□□□□□ -2.44
PCNX1-208ENST00000554707 COMMD3Q9UBI1 195 aa-0.16□□□□□ -2.44
PCNX1-208ENST00000554707 COL7A1Q02388 2944 aa-0.16□□□□□ -2.44
PCNX1-208ENST00000554707 NCOR2Q9Y618 2525 aa-0.17□□□□□ -2.44
PCNX1-208ENST00000554707 RTL9Q8NET4 1388 aa-0.17□□□□□ -2.44
PCNX1-208ENST00000554707 TAS2R41P59536 307 aa-0.17□□□□□ -2.44
PCNX1-208ENST00000554707 GNG3P63215 75 aa-0.17□□□□□ -2.44
PCNX1-208ENST00000554707 IQCJQ1A5X6 159 aa-0.17□□□□□ -2.44
PCNX1-208ENST00000554707 Q5BKY6 102 aa-0.17□□□□□ -2.44
PCNX1-208ENST00000554707 MCEEQ96PE7 176 aa-0.17□□□□□ -2.44
PCNX1-208ENST00000554707 PROK2Q9HC23 129 aa-0.17□□□□□ -2.44
PCNX1-208ENST00000554707 IL20Q9NYY1 176 aa-0.17□□□□□ -2.44
PCNX1-208ENST00000554707 DSTQ03001 7570 aaKnown RBP-0.17□□□□□ -2.44
PCNX1-208ENST00000554707 DMBT1Q9UGM3 2413 aaPredicted RBP-0.18□□□□□ -2.44
PCNX1-208ENST00000554707 ARL5CA6NH57 179 aa-0.18□□□□□ -2.44
PCNX1-208ENST00000554707 TPT1P13693 172 aaKnown RBP-0.18□□□□□ -2.44
PCNX1-208ENST00000554707 FAM24BQ8N5W8 94 aa-0.18□□□□□ -2.44
PCNX1-208ENST00000554707 TCTEX1D1Q8N7M0 179 aa-0.18□□□□□ -2.44
PCNX1-208ENST00000554707 C5orf56Q8N8D9 126 aa-0.18□□□□□ -2.44
PCNX1-208ENST00000554707 DIRC1Q969H9 104 aa-0.18□□□□□ -2.44
PCNX1-208ENST00000554707 HRNRQ86YZ3 2850 aaPredicted RBP-0.18□□□□□ -2.44
PCNX1-208ENST00000554707 ADGBQ8N7X0 1667 aa-0.18□□□□□ -2.44
PCNX1-208ENST00000554707 PIEZO1Q92508 2521 aa-0.19□□□□□ -2.44
PCNX1-208ENST00000554707 NBDYA0A0U1RRE5 68 aa-0.19□□□□□ -2.44
PCNX1-208ENST00000554707 IL7P13232 177 aa-0.19□□□□□ -2.44
PCNX1-208ENST00000554707 VMO1Q7Z5L0 202 aa-0.19□□□□□ -2.44
PCNX1-208ENST00000554707 STX19Q8N4C7 294 aa-0.19□□□□□ -2.44
PCNX1-208ENST00000554707 CCL4L1Q8NHW4 92 aa-0.19□□□□□ -2.44
PCNX1-208ENST00000554707 PRELID3AQ96N28 172 aa-0.19□□□□□ -2.44
PCNX1-208ENST00000554707 LRTM1Q9HBL6 345 aa-0.19□□□□□ -2.44
PCNX1-208ENST00000554707 UFC1Q9Y3C8 167 aa-0.19□□□□□ -2.44
PCNX1-208ENST00000554707 OTOGQ6ZRI0 2925 aa-0.2□□□□□ -2.44
PCNX1-208ENST00000554707 KIAA1107Q9UPP5 1409 aa-0.2□□□□□ -2.44
PCNX1-208ENST00000554707 GABARAPH6UMI1 98 aa-0.2□□□□□ -2.44
PCNX1-208ENST00000554707 CDC42EP2O14613 210 aa-0.2□□□□□ -2.44
PCNX1-208ENST00000554707 IGKCP01834 107 aa-0.2□□□□□ -2.44
PCNX1-208ENST00000554707 IZUMO2Q6UXV1 221 aa-0.2□□□□□ -2.44
PCNX1-208ENST00000554707 TEX29Q8N6K0 151 aa-0.2□□□□□ -2.44
PCNX1-208ENST00000554707 BIN3Q9NQY0 253 aa-0.2□□□□□ -2.44
PCNX1-208ENST00000554707 MRPL35Q9NZE8 188 aaKnown RBP-0.2□□□□□ -2.44
PCNX1-208ENST00000554707 LAMTOR3Q9UHA4 124 aa-0.2□□□□□ -2.44
PCNX1-208ENST00000554707 LRP1Q07954 4544 aaKnown RBP-0.2□□□□□ -2.44
PCNX1-208ENST00000554707 TMEM30CPA0ZSE6 113 aa-0.21□□□□□ -2.44
PCNX1-208ENST00000554707 HIGD1CA8MV81 97 aa-0.21□□□□□ -2.44
PCNX1-208ENST00000554707 SDC2P34741 201 aa-0.21□□□□□ -2.44
PCNX1-208ENST00000554707 TCTAP57738 103 aa-0.21□□□□□ -2.44
PCNX1-208ENST00000554707 MAXP61244 160 aa-0.21□□□□□ -2.44
PCNX1-208ENST00000554707 BASP1P80723 227 aaKnown RBP-0.21□□□□□ -2.44
PCNX1-208ENST00000554707 TMED4Q7Z7H5 227 aa-0.21□□□□□ -2.44
PCNX1-208ENST00000554707 OR8J3Q8NGG0 315 aa-0.21□□□□□ -2.44
PCNX1-208ENST00000554707 AP3S1Q92572 193 aa-0.21□□□□□ -2.44
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms