RNA–Protein interactions for RNA: ENST00000553846.1

PRKCH-208, Transcript of protein kinase C eta, humanhuman

TSL 4

Gene PRKCH, Length 557 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCH-208ENST00000553846 ERCC8Q13216 396 aa5.91□□□□□ -1.46
PRKCH-208ENST00000553846 ZNF846Q147U1 533 aa5.91□□□□□ -1.46
PRKCH-208ENST00000553846 SPANXN5Q5MJ07 72 aa5.91□□□□□ -1.46
PRKCH-208ENST00000553846 MZT2AQ6P582 158 aa5.91□□□□□ -1.46
PRKCH-208ENST00000553846 LINC00305Q7Z4B0 112 aa5.91□□□□□ -1.46
PRKCH-208ENST00000553846 Q8N3U1 123 aa5.91□□□□□ -1.46
PRKCH-208ENST00000553846 RASL10AQ92737 203 aa5.91□□□□□ -1.46
PRKCH-208ENST00000553846 PRRT1Q99946 306 aa5.91□□□□□ -1.46
PRKCH-208ENST00000553846 AGPAT4-IT1Q9H0P7 198 aa5.91□□□□□ -1.46
PRKCH-208ENST00000553846 PAIP2BQ9ULR5 123 aaKnown RBP5.91□□□□□ -1.46
PRKCH-208ENST00000553846 KCNIP3Q9Y2W7 256 aa5.91□□□□□ -1.46
PRKCH-208ENST00000553846 LPAP08519 4548 aa5.91□□□□□ -1.46
PRKCH-208ENST00000553846 LECT2O14960 151 aa5.9□□□□□ -1.46
PRKCH-208ENST00000553846 MPDU1O75352 247 aa5.9□□□□□ -1.46
PRKCH-208ENST00000553846 MED6O75586 246 aa5.9□□□□□ -1.46
PRKCH-208ENST00000553846 NDUFB4O95168 129 aa5.9□□□□□ -1.46
PRKCH-208ENST00000553846 NMBP08949 121 aa5.9□□□□□ -1.46
PRKCH-208ENST00000553846 AKAIN1P0CW23 69 aa5.9□□□□□ -1.46
PRKCH-208ENST00000553846 ASIPP42127 132 aa5.9□□□□□ -1.46
PRKCH-208ENST00000553846 SLC38A11Q08AI6 406 aa5.9□□□□□ -1.46
PRKCH-208ENST00000553846 PXDC1Q5TGL8 231 aa5.9□□□□□ -1.46
PRKCH-208ENST00000553846 BPIFA4PQ86YQ2 179 aa5.9□□□□□ -1.46
PRKCH-208ENST00000553846 OR10P1Q8NGE3 313 aa5.9□□□□□ -1.46
PRKCH-208ENST00000553846 AP3S1Q92572 193 aa5.9□□□□□ -1.46
PRKCH-208ENST00000553846 TXNDC17Q9BRA2 123 aa5.9□□□□□ -1.46
PRKCH-208ENST00000553846 MUC2Q02817 5179 aa5.89□□□□□ -1.47
PRKCH-208ENST00000553846 IGLV2-33A0A075B6J2 118 aaPredicted RBP5.89□□□□□ -1.47
PRKCH-208ENST00000553846 IGHV1OR15-1A0A075B7D0 117 aa5.89□□□□□ -1.47
PRKCH-208ENST00000553846 TRGV4A0A0C4DH28 118 aa5.89□□□□□ -1.47
PRKCH-208ENST00000553846 ANKRD20A5PA0PJZ0 165 aa5.89□□□□□ -1.47
PRKCH-208ENST00000553846 C9JCJ5 164 aa5.89□□□□□ -1.47
PRKCH-208ENST00000553846 CTDSPLO15194 276 aa5.89□□□□□ -1.47
PRKCH-208ENST00000553846 ANXA7P20073 488 aaKnown RBP5.89□□□□□ -1.47
PRKCH-208ENST00000553846 RNASE4P34096 147 aaKnown RBP5.89□□□□□ -1.47
PRKCH-208ENST00000553846 RPP30P78346 268 aaKnown RBP5.89□□□□□ -1.47
PRKCH-208ENST00000553846 MRPS10P82664 201 aaKnown RBP5.89□□□□□ -1.47
PRKCH-208ENST00000553846 ID3Q02535 119 aa5.89□□□□□ -1.47
PRKCH-208ENST00000553846 TDRG1Q3Y452 100 aa5.89□□□□□ -1.47
PRKCH-208ENST00000553846 TMEM14EPQ6UXP3 125 aa5.89□□□□□ -1.47
PRKCH-208ENST00000553846 C9orf47Q6ZRZ4 202 aa5.89□□□□□ -1.47
PRKCH-208ENST00000553846 CLVS1Q8IUQ0 354 aaPredicted RBP5.89□□□□□ -1.47
PRKCH-208ENST00000553846 C15orf40Q8WUR7 153 aa5.89□□□□□ -1.47
PRKCH-208ENST00000553846 PCNPQ8WW12 178 aaKnown RBP5.89□□□□□ -1.47
PRKCH-208ENST00000553846 KRTAP9-2Q9BYQ4 174 aa5.89□□□□□ -1.47
PRKCH-208ENST00000553846 NAA50Q9GZZ1 169 aaKnown RBP5.89□□□□□ -1.47
PRKCH-208ENST00000553846 RABL2BQ9UNT1 228 aa5.89□□□□□ -1.47
PRKCH-208ENST00000553846 RNF24Q9Y225 148 aa5.89□□□□□ -1.47
PRKCH-208ENST00000553846 STRAPQ9Y3F4 350 aaKnown RBP5.89□□□□□ -1.47
PRKCH-208ENST00000553846 TRAV4A0A0B4J268 109 aa5.88□□□□□ -1.47
PRKCH-208ENST00000553846 SMCO3A2RU48 225 aa5.88□□□□□ -1.47
PRKCH-208ENST00000553846 RNF222A6NCQ9 220 aa5.88□□□□□ -1.47
PRKCH-208ENST00000553846 RGS5O15539 181 aa5.88□□□□□ -1.47
PRKCH-208ENST00000553846 GATA1P15976 413 aaPredicted RBP5.88□□□□□ -1.47
PRKCH-208ENST00000553846 RPL37AP61513 92 aaKnown RBP5.88□□□□□ -1.47
PRKCH-208ENST00000553846 CTF1Q16619 201 aa5.88□□□□□ -1.47
PRKCH-208ENST00000553846 GUK1Q16774 197 aa5.88□□□□□ -1.47
PRKCH-208ENST00000553846 SH2D6Q7Z4S9 175 aa5.88□□□□□ -1.47
PRKCH-208ENST00000553846 S100A7AQ86SG5 101 aa5.88□□□□□ -1.47
PRKCH-208ENST00000553846 ZNF546Q86UE3 836 aa5.88□□□□□ -1.47
PRKCH-208ENST00000553846 LINC00477Q96M19 166 aa5.88□□□□□ -1.47
PRKCH-208ENST00000553846 MGST2Q99735 147 aa5.88□□□□□ -1.47
PRKCH-208ENST00000553846 SLC25A31Q9H0C2 315 aa5.88□□□□□ -1.47
PRKCH-208ENST00000553846 TRBV19A0A075B6N1 114 aa5.87□□□□□ -1.47
PRKCH-208ENST00000553846 AGPAT2O15120 278 aa5.87□□□□□ -1.47
PRKCH-208ENST00000553846 IGHV3-30P01768 117 aa5.87□□□□□ -1.47
PRKCH-208ENST00000553846 IGHV3-33P01772 117 aa5.87□□□□□ -1.47
PRKCH-208ENST00000553846 IGHV3-30-3P0DP02 117 aa5.87□□□□□ -1.47
PRKCH-208ENST00000553846 IGHV3-30-5P0DP03 117 aa5.87□□□□□ -1.47
PRKCH-208ENST00000553846 ANXA3P12429 323 aa5.87□□□□□ -1.47
PRKCH-208ENST00000553846 POLR2GP62487 172 aaKnown RBP eCLIP5.87□□□□□ -1.47
PRKCH-208ENST00000553846 ARL16Q0P5N6 197 aa5.87□□□□□ -1.47
PRKCH-208ENST00000553846 ACOT6Q3I5F7 207 aaPredicted RBP5.87□□□□□ -1.47
PRKCH-208ENST00000553846 TM2D2Q9BX73 214 aa5.87□□□□□ -1.47
PRKCH-208ENST00000553846 NPVFQ9HCQ7 196 aa5.87□□□□□ -1.47
PRKCH-208ENST00000553846 FAT4Q6V0I7 4981 aa5.86□□□□□ -1.47
PRKCH-208ENST00000553846 PIGBOS1A0A0B4J2F0 54 aa5.86□□□□□ -1.47
PRKCH-208ENST00000553846 RGS13O14921 159 aa5.86□□□□□ -1.47
PRKCH-208ENST00000553846 TNFSF8P32971 234 aa5.86□□□□□ -1.47
PRKCH-208ENST00000553846 RRAS2P62070 204 aaPredicted RBP5.86□□□□□ -1.47
PRKCH-208ENST00000553846 TMEM128Q5BJH2 165 aa5.86□□□□□ -1.47
PRKCH-208ENST00000553846 LELP1Q5T871 98 aa5.86□□□□□ -1.47
PRKCH-208ENST00000553846 Q6ZRU5 148 aa5.86□□□□□ -1.47
PRKCH-208ENST00000553846 BAALCQ8WXS3 180 aa5.86□□□□□ -1.47
PRKCH-208ENST00000553846 SMIM8Q96KF7 97 aa5.86□□□□□ -1.47
PRKCH-208ENST00000553846 SCGB3A2Q96PL1 93 aa5.86□□□□□ -1.47
PRKCH-208ENST00000553846 PAXXQ9BUH6 204 aa5.86□□□□□ -1.47
PRKCH-208ENST00000553846 IGKV2-40A0A087WW87 121 aaPredicted RBP5.85□□□□□ -1.47
PRKCH-208ENST00000553846 TRBV7-9A0A0J9YWB2 115 aa5.85□□□□□ -1.47
PRKCH-208ENST00000553846 CTDSP2O14595 271 aa5.85□□□□□ -1.47
PRKCH-208ENST00000553846 COX7A2P2O60397 106 aa5.85□□□□□ -1.47
PRKCH-208ENST00000553846 IGKV2D-40P01614 121 aaPredicted RBP5.85□□□□□ -1.47
PRKCH-208ENST00000553846 GPX1P07203 203 aa5.85□□□□□ -1.47
PRKCH-208ENST00000553846 METTL15P1P0C7V9 234 aa5.85□□□□□ -1.47
PRKCH-208ENST00000553846 LINC00694P0DN24 101 aa5.85□□□□□ -1.47
PRKCH-208ENST00000553846 PPT1P50897 306 aa5.85□□□□□ -1.47
PRKCH-208ENST00000553846 ODF1Q14990 250 aa5.85□□□□□ -1.47
PRKCH-208ENST00000553846 C10orf113Q5VZT2 155 aa5.85□□□□□ -1.47
PRKCH-208ENST00000553846 DNAJC30Q96LL9 226 aa5.85□□□□□ -1.47
PRKCH-208ENST00000553846 ARPC5LQ9BPX5 153 aa5.85□□□□□ -1.47
PRKCH-208ENST00000553846 SPXQ9BT56 116 aa5.85□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms