RNA–Protein interactions for RNA: ENST00000553837.5

SHMT2-207, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 5

Gene SHMT2, Length 2,152 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-207ENST00000553837 ABCA1O95477 2261 aa9.63□□□□□ -0.87
SHMT2-207ENST00000553837 OVOL3O00110 214 aa9.63□□□□□ -0.87
SHMT2-207ENST00000553837 PPP1R27Q86WC6 154 aa9.63□□□□□ -0.87
SHMT2-207ENST00000553837 PCP2Q8IVA1 136 aa9.63□□□□□ -0.87
SHMT2-207ENST00000553837 CIARTQ8N365 385 aaPredicted RBP9.63□□□□□ -0.87
SHMT2-207ENST00000553837 C8orf46Q8TAG6 207 aa9.63□□□□□ -0.87
SHMT2-207ENST00000553837 SRSF12Q8WXF0 261 aaKnown RBP9.63□□□□□ -0.87
SHMT2-207ENST00000553837 RNF183Q96D59 192 aa9.63□□□□□ -0.87
SHMT2-207ENST00000553837 SPANXA1Q9NS26 97 aa9.63□□□□□ -0.87
SHMT2-207ENST00000553837 HIGD1BQ9P298 99 aa9.63□□□□□ -0.87
SHMT2-207ENST00000553837 ONECUT1Q9UBC0 465 aa9.63□□□□□ -0.87
SHMT2-207ENST00000553837 SVEP1Q4LDE5 3571 aa9.62□□□□□ -0.87
SHMT2-207ENST00000553837 FAM106CPP0CH98 169 aa9.62□□□□□ -0.87
SHMT2-207ENST00000553837 FCGR2BP31994 310 aaPredicted RBP9.62□□□□□ -0.87
SHMT2-207ENST00000553837 FAM106AQ4KMX7 169 aa9.62□□□□□ -0.87
SHMT2-207ENST00000553837 Q6AWC8 147 aa9.62□□□□□ -0.87
SHMT2-207ENST00000553837 BCL6BQ8N143 479 aaPredicted RBP9.62□□□□□ -0.87
SHMT2-207ENST00000553837 LY6G5BQ8NDX9 201 aa9.62□□□□□ -0.87
SHMT2-207ENST00000553837 HBDP02042 147 aa9.61□□□□□ -0.87
SHMT2-207ENST00000553837 SPINK8P0C7L1 97 aa9.61□□□□□ -0.87
SHMT2-207ENST00000553837 GCSHP23434 173 aa9.61□□□□□ -0.87
SHMT2-207ENST00000553837 TCTAP57738 103 aa9.61□□□□□ -0.87
SHMT2-207ENST00000553837 RPL32P62910 135 aaKnown RBP9.61□□□□□ -0.87
SHMT2-207ENST00000553837 PRNTQ86SH4 94 aa9.61□□□□□ -0.87
SHMT2-207ENST00000553837 PIFOQ8TCI5 191 aa9.61□□□□□ -0.87
SHMT2-207ENST00000553837 RPEQ96AT9 228 aa9.61□□□□□ -0.87
SHMT2-207ENST00000553837 TRGV9Q99603 122 aa9.61□□□□□ -0.87
SHMT2-207ENST00000553837 OTORQ9NRC9 128 aa9.61□□□□□ -0.87
SHMT2-207ENST00000553837 F11RQ9Y624 299 aaKnown RBP9.61□□□□□ -0.87
SHMT2-207ENST00000553837 ASH1LQ9NR48 2969 aaKnown RBP9.61□□□□□ -0.87
SHMT2-207ENST00000553837 TRBV6-1A0A0K0K1D8 114 aa9.61□□□□□ -0.87
SHMT2-207ENST00000553837 LOC389332A0A1B0GUA5 103 aa9.61□□□□□ -0.87
SHMT2-207ENST00000553837 TMEM8BA6NDV4 472 aa9.61□□□□□ -0.87
SHMT2-207ENST00000553837 H3BTX0 84 aa9.61□□□□□ -0.87
SHMT2-207ENST00000553837 TIMM23O14925 209 aa9.61□□□□□ -0.87
SHMT2-207ENST00000553837 GP9P14770 177 aa9.61□□□□□ -0.87
SHMT2-207ENST00000553837 LOXL1Q08397 574 aaPredicted RBP9.61□□□□□ -0.87
SHMT2-207ENST00000553837 KLRD1Q13241 179 aa9.61□□□□□ -0.87
SHMT2-207ENST00000553837 ZNF493Q6ZR52 646 aa9.61□□□□□ -0.87
SHMT2-207ENST00000553837 ZNF502Q8TBZ5 544 aa9.61□□□□□ -0.87
SHMT2-207ENST00000553837 IFI27L1Q96BM0 104 aa9.61□□□□□ -0.87
SHMT2-207ENST00000553837 BRI3O95415 125 aa9.6□□□□□ -0.87
SHMT2-207ENST00000553837 RBP4P02753 201 aa9.6□□□□□ -0.87
SHMT2-207ENST00000553837 ANAPC13Q9BS18 74 aa9.6□□□□□ -0.87
SHMT2-207ENST00000553837 U3KQK5 164 aa9.6□□□□□ -0.87
SHMT2-207ENST00000553837 KLRB1Q12918 225 aa9.6□□□□□ -0.87
SHMT2-207ENST00000553837 C11orf71Q6IPW1 123 aa9.6□□□□□ -0.87
SHMT2-207ENST00000553837 PRELID3AQ96N28 172 aa9.6□□□□□ -0.87
SHMT2-207ENST00000553837 TRAV8-1A0A0A6YYK1 113 aa9.59□□□□□ -0.87
SHMT2-207ENST00000553837 A0A1W2PRD5 423 aa9.59□□□□□ -0.87
SHMT2-207ENST00000553837 A0A1W2PRF3 423 aa9.59□□□□□ -0.87
SHMT2-207ENST00000553837 A0A1W2PRM7 423 aa9.59□□□□□ -0.87
SHMT2-207ENST00000553837 D6R8Y8 96 aa9.59□□□□□ -0.87
SHMT2-207ENST00000553837 I3L2K1 104 aa9.59□□□□□ -0.87
SHMT2-207ENST00000553837 IGLV2-11P01706 119 aa9.59□□□□□ -0.87
SHMT2-207ENST00000553837 GATA3P23771 443 aa9.59□□□□□ -0.87
SHMT2-207ENST00000553837 FXYD2P54710 66 aa9.59□□□□□ -0.87
SHMT2-207ENST00000553837 TM4SF20Q53R12 229 aa9.59□□□□□ -0.87
SHMT2-207ENST00000553837 ZNF562Q6V9R5 426 aa9.59□□□□□ -0.87
SHMT2-207ENST00000553837 TMEM190Q8WZ59 177 aa9.59□□□□□ -0.87
SHMT2-207ENST00000553837 A0A1W2PPR1 153 aa9.58□□□□□ -0.88
SHMT2-207ENST00000553837 FBLL1A6NHQ2 334 aaKnown RBP9.58□□□□□ -0.88
SHMT2-207ENST00000553837 CNIH1O95406 144 aa9.58□□□□□ -0.88
SHMT2-207ENST00000553837 WFDC2Q14508 124 aa9.58□□□□□ -0.88
SHMT2-207ENST00000553837 GOLT1AQ6ZVE7 132 aa9.58□□□□□ -0.88
SHMT2-207ENST00000553837 ORMDL3Q8N138 153 aa9.58□□□□□ -0.88
SHMT2-207ENST00000553837 PHLDA1Q8WV24 401 aaPredicted RBP9.58□□□□□ -0.88
SHMT2-207ENST00000553837 CFHR4Q92496 578 aa9.58□□□□□ -0.88
SHMT2-207ENST00000553837 COL6A6A6NMZ7 2263 aa9.58□□□□□ -0.88
SHMT2-207ENST00000553837 E9PLD3 99 aa9.58□□□□□ -0.88
SHMT2-207ENST00000553837 NDUFS7O75251 213 aa9.58□□□□□ -0.88
SHMT2-207ENST00000553837 HOXB4P17483 251 aaPredicted RBP9.58□□□□□ -0.88
SHMT2-207ENST00000553837 ATP6V0E2Q8NHE4 81 aa9.58□□□□□ -0.88
SHMT2-207ENST00000553837 VCX2Q9H322 139 aa9.58□□□□□ -0.88
SHMT2-207ENST00000553837 FAM104BQ5XKR9 115 aa9.57□□□□□ -0.88
SHMT2-207ENST00000553837 Q71RC1 249 aaPredicted RBP9.57□□□□□ -0.88
SHMT2-207ENST00000553837 CHAC1Q9BUX1 264 aa9.57□□□□□ -0.88
SHMT2-207ENST00000553837 TPPP3Q9BW30 176 aa9.57□□□□□ -0.88
SHMT2-207ENST00000553837 TM2D2Q9BX73 214 aa9.57□□□□□ -0.88
SHMT2-207ENST00000553837 RAB1BQ9H0U4 201 aa9.57□□□□□ -0.88
SHMT2-207ENST00000553837 YAE1D1Q9NRH1 226 aa9.57□□□□□ -0.88
SHMT2-207ENST00000553837 UFC1Q9Y3C8 167 aa9.57□□□□□ -0.88
SHMT2-207ENST00000553837 ZNF785A8K8V0 405 aa9.57□□□□□ -0.88
SHMT2-207ENST00000553837 ATP5G2Q06055 141 aa9.57□□□□□ -0.88
SHMT2-207ENST00000553837 PAX8Q06710 450 aa9.57□□□□□ -0.88
SHMT2-207ENST00000553837 SRSF1Q07955 248 aaKnown RBP eCLIP9.57□□□□□ -0.88
SHMT2-207ENST00000553837 PLGLAQ15195 96 aa9.57□□□□□ -0.88
SHMT2-207ENST00000553837 DYNAPQ8N1N2 210 aa9.57□□□□□ -0.88
SHMT2-207ENST00000553837 OR11H6Q8NGC7 330 aa9.57□□□□□ -0.88
SHMT2-207ENST00000553837 TMEM14CQ9P0S9 112 aa9.57□□□□□ -0.88
SHMT2-207ENST00000553837 DKK2Q9UBU2 259 aa9.57□□□□□ -0.88
SHMT2-207ENST00000553837 B5MCH6 92 aa9.56□□□□□ -0.88
SHMT2-207ENST00000553837 K7EIM0 57 aa9.56□□□□□ -0.88
SHMT2-207ENST00000553837 K7ERJ3 54 aa9.56□□□□□ -0.88
SHMT2-207ENST00000553837 IGKV1-17P01599 117 aa9.56□□□□□ -0.88
SHMT2-207ENST00000553837 UCNP55089 124 aa9.56□□□□□ -0.88
SHMT2-207ENST00000553837 KLF17Q5JT82 389 aaPredicted RBP9.56□□□□□ -0.88
SHMT2-207ENST00000553837 CEND1Q8N111 149 aa9.56□□□□□ -0.88
SHMT2-207ENST00000553837 SMIM20Q8N5G0 67 aa9.56□□□□□ -0.88
SHMT2-207ENST00000553837 TMEM75Q8N9X5 138 aa9.56□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms