RNA–Protein interactions for RNA: ENST00000553370.5

ACTN1-208, Transcript of actinin alpha 1, humanhuman

TSL 3

Gene ACTN1, Length 605 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-208ENST00000553370 CFAP161Q6P656 301 aa6.89□□□□□ -1.31
ACTN1-208ENST00000553370 PATE2Q6UY27 113 aa6.89□□□□□ -1.31
ACTN1-208ENST00000553370 ZNF680Q8NEM1 530 aa6.89□□□□□ -1.31
ACTN1-208ENST00000553370 PYGO2Q9BRQ0 406 aa6.89□□□□□ -1.31
ACTN1-208ENST00000553370 GGACTQ9BVM4 153 aa6.89□□□□□ -1.31
ACTN1-208ENST00000553370 MRPS16Q9Y3D3 137 aaKnown RBP6.89□□□□□ -1.31
ACTN1-208ENST00000553370 UBE2L5PA0A1B0GUS4 154 aa6.88□□□□□ -1.31
ACTN1-208ENST00000553370 A0A1W2PPQ1 181 aa6.88□□□□□ -1.31
ACTN1-208ENST00000553370 C5orf51A6NDU8 294 aa6.88□□□□□ -1.31
ACTN1-208ENST00000553370 PRAC2D3DTV9 90 aa6.88□□□□□ -1.31
ACTN1-208ENST00000553370 S100A10P60903 97 aa6.88□□□□□ -1.31
ACTN1-208ENST00000553370 Q6ZTI0 123 aa6.88□□□□□ -1.31
ACTN1-208ENST00000553370 C12orf45Q8N5I9 185 aaPredicted RBP6.88□□□□□ -1.31
ACTN1-208ENST00000553370 MGST2Q99735 147 aa6.88□□□□□ -1.31
ACTN1-208ENST00000553370 DNAJC4Q9NNZ3 241 aa6.88□□□□□ -1.31
ACTN1-208ENST00000553370 TIMM9Q9Y5J7 89 aa6.88□□□□□ -1.31
ACTN1-208ENST00000553370 C7orf71A4D174 169 aa6.87□□□□□ -1.31
ACTN1-208ENST00000553370 CCSO14618 274 aa6.87□□□□□ -1.31
ACTN1-208ENST00000553370 MRPS12O15235 138 aaKnown RBP6.87□□□□□ -1.31
ACTN1-208ENST00000553370 CST7O76096 145 aa6.87□□□□□ -1.31
ACTN1-208ENST00000553370 MBPP02686 304 aaPredicted RBP6.87□□□□□ -1.31
ACTN1-208ENST00000553370 HOXA5P20719 270 aa6.87□□□□□ -1.31
ACTN1-208ENST00000553370 LINC00310P59036 64 aa6.87□□□□□ -1.31
ACTN1-208ENST00000553370 ERVFC1-1P60608 527 aa6.87□□□□□ -1.31
ACTN1-208ENST00000553370 NHLH2Q02577 135 aa6.87□□□□□ -1.31
ACTN1-208ENST00000553370 ESRGQ1W209 222 aa6.87□□□□□ -1.31
ACTN1-208ENST00000553370 MIC13Q5XKP0 118 aa6.87□□□□□ -1.31
ACTN1-208ENST00000553370 NRARPQ7Z6K4 114 aa6.87□□□□□ -1.31
ACTN1-208ENST00000553370 STX12Q86Y82 276 aa6.87□□□□□ -1.31
ACTN1-208ENST00000553370 Q8N1X5 172 aa6.87□□□□□ -1.31
ACTN1-208ENST00000553370 ODF3Q96PU9 254 aa6.87□□□□□ -1.31
ACTN1-208ENST00000553370 UPK3BQ9BT76 320 aa6.87□□□□□ -1.31
ACTN1-208ENST00000553370 SRRQ9GZT4 340 aa6.87□□□□□ -1.31
ACTN1-208ENST00000553370 C20orf85Q9H1P6 137 aa6.87□□□□□ -1.31
ACTN1-208ENST00000553370 AAMDCQ9H7C9 122 aa6.87□□□□□ -1.31
ACTN1-208ENST00000553370 UQCC1Q9NVA1 299 aa6.87□□□□□ -1.31
ACTN1-208ENST00000553370 FUT9Q9Y231 359 aa6.87□□□□□ -1.31
ACTN1-208ENST00000553370 ICOSQ9Y6W8 199 aa6.87□□□□□ -1.31
ACTN1-208ENST00000553370 C7orf66A4D0T2 115 aa6.86□□□□□ -1.31
ACTN1-208ENST00000553370 NPIPB6E9PJ23 425 aa6.86□□□□□ -1.31
ACTN1-208ENST00000553370 H3BNG1 76 aa6.86□□□□□ -1.31
ACTN1-208ENST00000553370 SIVA1O15304 175 aa6.86□□□□□ -1.31
ACTN1-208ENST00000553370 SLC25A5P05141 298 aaKnown RBP6.86□□□□□ -1.31
ACTN1-208ENST00000553370 GPX1P07203 203 aa6.86□□□□□ -1.31
ACTN1-208ENST00000553370 CT45A10P0DMU9 189 aa6.86□□□□□ -1.31
ACTN1-208ENST00000553370 IGLC2P0DOY2 106 aa6.86□□□□□ -1.31
ACTN1-208ENST00000553370 HIST1H1EP10412 219 aaKnown RBP6.86□□□□□ -1.31
ACTN1-208ENST00000553370 FGF7P21781 194 aa6.86□□□□□ -1.31
ACTN1-208ENST00000553370 RNASE4P34096 147 aaKnown RBP6.86□□□□□ -1.31
ACTN1-208ENST00000553370 LINC00315P59091 139 aa6.86□□□□□ -1.31
ACTN1-208ENST00000553370 HBG1P69891 147 aa6.86□□□□□ -1.31
ACTN1-208ENST00000553370 HBG2P69892 147 aa6.86□□□□□ -1.31
ACTN1-208ENST00000553370 TMEM78Q5T7P6 136 aa6.86□□□□□ -1.31
ACTN1-208ENST00000553370 BLNKQ8WV28 456 aa6.86□□□□□ -1.31
ACTN1-208ENST00000553370 TMEM37Q8WXS4 190 aa6.86□□□□□ -1.31
ACTN1-208ENST00000553370 KRTAP1-5Q9BYS1 174 aa6.86□□□□□ -1.31
ACTN1-208ENST00000553370 GSN-AS1Q9NRJ2 163 aa6.86□□□□□ -1.31
ACTN1-208ENST00000553370 TRAV5A0A0B4J249 113 aa6.85□□□□□ -1.31
ACTN1-208ENST00000553370 F5H697 171 aa6.85□□□□□ -1.31
ACTN1-208ENST00000553370 H3BQ15 152 aa6.85□□□□□ -1.31
ACTN1-208ENST00000553370 PAX4O43316 350 aa6.85□□□□□ -1.31
ACTN1-208ENST00000553370 IGHV3-53P01767 116 aa6.85□□□□□ -1.31
ACTN1-208ENST00000553370 ARL16Q0P5N6 197 aa6.85□□□□□ -1.31
ACTN1-208ENST00000553370 DAZ2Q13117 558 aaKnown RBP6.85□□□□□ -1.31
ACTN1-208ENST00000553370 ERCC8Q13216 396 aa6.85□□□□□ -1.31
ACTN1-208ENST00000553370 BTN1A1Q13410 526 aa6.85□□□□□ -1.31
ACTN1-208ENST00000553370 MORN5Q5VZ52 161 aa6.85□□□□□ -1.31
ACTN1-208ENST00000553370 EIF4E3Q8N5X7 224 aaKnown RBP6.85□□□□□ -1.31
ACTN1-208ENST00000553370 LINC00612Q8N6U2 182 aa6.85□□□□□ -1.31
ACTN1-208ENST00000553370 MITD1Q8WV92 249 aa6.85□□□□□ -1.31
ACTN1-208ENST00000553370 PCNPQ8WW12 178 aaKnown RBP6.85□□□□□ -1.31
ACTN1-208ENST00000553370 GPN1Q9HCN4 374 aaPredicted RBP6.85□□□□□ -1.31
ACTN1-208ENST00000553370 PRELID1Q9Y255 219 aa6.85□□□□□ -1.31
ACTN1-208ENST00000553370 TRAV6A0A075B6T7 132 aa6.84□□□□□ -1.31
ACTN1-208ENST00000553370 A0A096LPF7 62 aa6.84□□□□□ -1.31
ACTN1-208ENST00000553370 EPM2AB3EWF7 344 aa6.84□□□□□ -1.31
ACTN1-208ENST00000553370 DIRC3C9JPN6 131 aa6.84□□□□□ -1.31
ACTN1-208ENST00000553370 MPDU1O75352 247 aa6.84□□□□□ -1.31
ACTN1-208ENST00000553370 NXPH4O95158 308 aa6.84□□□□□ -1.31
ACTN1-208ENST00000553370 IFNA5P01569 189 aa6.84□□□□□ -1.31
ACTN1-208ENST00000553370 KRTAP10-2P60368 255 aa6.84□□□□□ -1.31
ACTN1-208ENST00000553370 BAK1Q16611 211 aa6.84□□□□□ -1.31
ACTN1-208ENST00000553370 ZNF431Q8TF32 576 aaPredicted RBP6.84□□□□□ -1.31
ACTN1-208ENST00000553370 MRPL53Q96EL3 112 aaKnown RBP6.84□□□□□ -1.31
ACTN1-208ENST00000553370 SLC39A9Q9NUM3 307 aa6.84□□□□□ -1.31
ACTN1-208ENST00000553370 MRPL16Q9NX20 251 aaKnown RBP6.84□□□□□ -1.31
ACTN1-208ENST00000553370 LRP1BQ9NZR2 4599 aa6.83□□□□□ -1.32
ACTN1-208ENST00000553370 TRAV9-2A0A087WT02 112 aa6.83□□□□□ -1.32
ACTN1-208ENST00000553370 TRGV4A0A0C4DH28 118 aa6.83□□□□□ -1.32
ACTN1-208ENST00000553370 FAM24AA6NFZ4 105 aa6.83□□□□□ -1.32
ACTN1-208ENST00000553370 M0R3E3 92 aa6.83□□□□□ -1.32
ACTN1-208ENST00000553370 TRIAP1O43715 76 aa6.83□□□□□ -1.32
ACTN1-208ENST00000553370 ZNF253O75346 499 aa6.83□□□□□ -1.32
ACTN1-208ENST00000553370 S100A11P31949 105 aa6.83□□□□□ -1.32
ACTN1-208ENST00000553370 SULT1A1P50225 295 aa6.83□□□□□ -1.32
ACTN1-208ENST00000553370 ZNF415Q09FC8 603 aa6.83□□□□□ -1.32
ACTN1-208ENST00000553370 FAM122CQ6P4D5 195 aa6.83□□□□□ -1.32
ACTN1-208ENST00000553370 NFE4Q86UQ8 179 aa6.83□□□□□ -1.32
ACTN1-208ENST00000553370 SAT2Q96F10 170 aaPredicted RBP6.83□□□□□ -1.32
ACTN1-208ENST00000553370 LINC00477Q96M19 166 aa6.83□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 56.1 ms