RNA–Protein interactions for RNA: ENST00000551391.1

SCAF11-215, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 3

Gene SCAF11, Length 324 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-215ENST00000551391 CAV3P56539 151 aa0.13□□□□□ -2.39
SCAF11-215ENST00000551391 QRFPP83859 136 aa0.13□□□□□ -2.39
SCAF11-215ENST00000551391 CASC2Q6XLA1 102 aa0.13□□□□□ -2.39
SCAF11-215ENST00000551391 STX19Q8N4C7 294 aa0.13□□□□□ -2.39
SCAF11-215ENST00000551391 C5orf17Q8NAS9 161 aa0.13□□□□□ -2.39
SCAF11-215ENST00000551391 OR4B1Q8NGF8 309 aa0.13□□□□□ -2.39
SCAF11-215ENST00000551391 BOLA2Q9H3K6 86 aa0.13□□□□□ -2.39
SCAF11-215ENST00000551391 LRTM1Q9HBL6 345 aa0.13□□□□□ -2.39
SCAF11-215ENST00000551391 BIN3Q9NQY0 253 aa0.13□□□□□ -2.39
SCAF11-215ENST00000551391 NAT8BQ9UHF3 227 aa0.13□□□□□ -2.39
SCAF11-215ENST00000551391 NUBP2Q9Y5Y2 271 aa0.13□□□□□ -2.39
SCAF11-215ENST00000551391 CTTNBP2Q8WZ74 1663 aa0.13□□□□□ -2.39
SCAF11-215ENST00000551391 BDP1A6H8Y1 2624 aa0.13□□□□□ -2.39
SCAF11-215ENST00000551391 TNCP24821 2201 aa0.13□□□□□ -2.39
SCAF11-215ENST00000551391 SPTBP11277 2137 aa0.13□□□□□ -2.39
SCAF11-215ENST00000551391 TECPR2O15040 1411 aa0.13□□□□□ -2.39
SCAF11-215ENST00000551391 SYNMO15061 1565 aa0.12□□□□□ -2.39
SCAF11-215ENST00000551391 KNTC1P50748 2209 aa0.12□□□□□ -2.39
SCAF11-215ENST00000551391 TRDV1A0A1B0GX56 115 aa0.12□□□□□ -2.39
SCAF11-215ENST00000551391 TRACP01848 142 aa0.12□□□□□ -2.39
SCAF11-215ENST00000551391 GLRXP35754 106 aa0.12□□□□□ -2.39
SCAF11-215ENST00000551391 BASP1P80723 227 aaKnown RBP0.12□□□□□ -2.39
SCAF11-215ENST00000551391 NEDD8Q15843 81 aa0.12□□□□□ -2.39
SCAF11-215ENST00000551391 XAF1Q6GPH4 301 aa0.12□□□□□ -2.39
SCAF11-215ENST00000551391 IZUMO2Q6UXV1 221 aa0.12□□□□□ -2.39
SCAF11-215ENST00000551391 LPAR5Q9H1C0 372 aa0.12□□□□□ -2.39
SCAF11-215ENST00000551391 USP54Q70EL1 1684 aa0.11□□□□□ -2.39
SCAF11-215ENST00000551391 BCORL1Q5H9F3 1711 aa0.11□□□□□ -2.39
SCAF11-215ENST00000551391 SULT1C4O75897 302 aa0.11□□□□□ -2.39
SCAF11-215ENST00000551391 FAM24BQ8N5W8 94 aa0.11□□□□□ -2.39
SCAF11-215ENST00000551391 OR5AK2Q8NH90 309 aa0.11□□□□□ -2.39
SCAF11-215ENST00000551391 ISOC1Q96CN7 298 aa0.11□□□□□ -2.39
SCAF11-215ENST00000551391 KIAA1549LQ6ZVL6 1849 aa0.1□□□□□ -2.39
SCAF11-215ENST00000551391 TCOF1Q13428 1488 aaKnown RBP0.1□□□□□ -2.39
SCAF11-215ENST00000551391 ROCK1Q13464 1354 aa0.1□□□□□ -2.39
SCAF11-215ENST00000551391 LOC285556D6RIA3 1793 aa0.1□□□□□ -2.39
SCAF11-215ENST00000551391 SERPINB1P30740 379 aa0.1□□□□□ -2.39
SCAF11-215ENST00000551391 NDUFA6P56556 154 aa0.1□□□□□ -2.39
SCAF11-215ENST00000551391 SPINK13Q1W4C9 94 aa0.1□□□□□ -2.39
SCAF11-215ENST00000551391 AP1S3Q96PC3 154 aa0.1□□□□□ -2.39
SCAF11-215ENST00000551391 CIB3Q96Q77 187 aaPredicted RBP0.1□□□□□ -2.39
SCAF11-215ENST00000551391 MED11Q9P086 117 aa0.1□□□□□ -2.39
SCAF11-215ENST00000551391 ANKRD31Q8N7Z5 1873 aa0.1□□□□□ -2.39
SCAF11-215ENST00000551391 C3orf85A0A1B0GTC6 90 aa0.09□□□□□ -2.4
SCAF11-215ENST00000551391 TMEM238C9JI98 176 aa0.09□□□□□ -2.4
SCAF11-215ENST00000551391 PPP5D1E7EU14 171 aa0.09□□□□□ -2.4
SCAF11-215ENST00000551391 H7BYZ3 331 aa0.09□□□□□ -2.4
SCAF11-215ENST00000551391 GYPBP06028 91 aa0.09□□□□□ -2.4
SCAF11-215ENST00000551391 SAA1P0DJI8 122 aaPredicted RBP0.09□□□□□ -2.4
SCAF11-215ENST00000551391 FABP2P12104 132 aa0.09□□□□□ -2.4
SCAF11-215ENST00000551391 SPINK6Q6UWN8 80 aa0.09□□□□□ -2.4
SCAF11-215ENST00000551391 DEFB132Q7Z7B7 95 aa0.09□□□□□ -2.4
SCAF11-215ENST00000551391 OR5H6Q8NGV6 325 aa0.09□□□□□ -2.4
SCAF11-215ENST00000551391 CLEC2BQ92478 149 aa0.09□□□□□ -2.4
SCAF11-215ENST00000551391 HOPXQ9BPY8 73 aaPredicted RBP0.09□□□□□ -2.4
SCAF11-215ENST00000551391 NABP2Q9BQ15 211 aa0.09□□□□□ -2.4
SCAF11-215ENST00000551391 MYH3P11055 1940 aa0.09□□□□□ -2.4
SCAF11-215ENST00000551391 C5orf58C9J3I9 102 aa0.08□□□□□ -2.4
SCAF11-215ENST00000551391 GABARAPH6UMI1 98 aa0.08□□□□□ -2.4
SCAF11-215ENST00000551391 BCL2P10415 239 aa0.08□□□□□ -2.4
SCAF11-215ENST00000551391 EVI2AP22794 236 aa0.08□□□□□ -2.4
SCAF11-215ENST00000551391 RPS3P23396 243 aaKnown RBP eCLIP0.08□□□□□ -2.4
SCAF11-215ENST00000551391 MAXP61244 160 aa0.08□□□□□ -2.4
SCAF11-215ENST00000551391 CCSMST1Q4G0I0 132 aa0.08□□□□□ -2.4
SCAF11-215ENST00000551391 GLYATL3Q5SZD4 288 aa0.08□□□□□ -2.4
SCAF11-215ENST00000551391 C3orf33Q6P1S2 294 aa0.08□□□□□ -2.4
SCAF11-215ENST00000551391 PRELID3AQ96N28 172 aa0.08□□□□□ -2.4
SCAF11-215ENST00000551391 DSPPQ9NZW4 1301 aa0.08□□□□□ -2.4
SCAF11-215ENST00000551391 DLC1Q96QB1 1528 aa0.08□□□□□ -2.4
SCAF11-215ENST00000551391 MAP1LC3B2A6NCE7 125 aa0.07□□□□□ -2.4
SCAF11-215ENST00000551391 PRORSD1PA6NEY8 169 aa0.07□□□□□ -2.4
SCAF11-215ENST00000551391 LY6G6CO95867 125 aa0.07□□□□□ -2.4
SCAF11-215ENST00000551391 TPT1P13693 172 aaKnown RBP0.07□□□□□ -2.4
SCAF11-215ENST00000551391 CRYBA4P53673 196 aa0.07□□□□□ -2.4
SCAF11-215ENST00000551391 RPL37P61927 97 aaKnown RBP0.07□□□□□ -2.4
SCAF11-215ENST00000551391 TMEM78Q5T7P6 136 aa0.07□□□□□ -2.4
SCAF11-215ENST00000551391 TCTEX1D1Q8N7M0 179 aa0.07□□□□□ -2.4
SCAF11-215ENST00000551391 CDC26Q8NHZ8 85 aa0.07□□□□□ -2.4
SCAF11-215ENST00000551391 DYDC1Q8WWB3 177 aa0.07□□□□□ -2.4
SCAF11-215ENST00000551391 MRPL35Q9NZE8 188 aaKnown RBP0.07□□□□□ -2.4
SCAF11-215ENST00000551391 LAMTOR2Q9Y2Q5 125 aa0.07□□□□□ -2.4
SCAF11-215ENST00000551391 GPR98Q8WXG9 6306 aa0.06□□□□□ -2.4
SCAF11-215ENST00000551391 TRBV27A0A0K0K1C4 114 aa0.06□□□□□ -2.4
SCAF11-215ENST00000551391 ARL5CA6NH57 179 aa0.06□□□□□ -2.4
SCAF11-215ENST00000551391 E5RI56 91 aa0.06□□□□□ -2.4
SCAF11-215ENST00000551391 SDC2P34741 201 aa0.06□□□□□ -2.4
SCAF11-215ENST00000551391 DNAJB13P59910 316 aa0.06□□□□□ -2.4
SCAF11-215ENST00000551391 CSAG1Q6PB30 78 aa0.06□□□□□ -2.4
SCAF11-215ENST00000551391 DCUN1D2Q6PH85 259 aa0.06□□□□□ -2.4
SCAF11-215ENST00000551391 C3orf62Q6ZUJ4 267 aa0.06□□□□□ -2.4
SCAF11-215ENST00000551391 ANGPTL5Q86XS5 388 aa0.06□□□□□ -2.4
SCAF11-215ENST00000551391 TMEM229BQ8NBD8 167 aa0.06□□□□□ -2.4
SCAF11-215ENST00000551391 C19orf12Q9NSK7 152 aa0.06□□□□□ -2.4
SCAF11-215ENST00000551391 GID8Q9NWU2 228 aa0.06□□□□□ -2.4
SCAF11-215ENST00000551391 MPC1Q9Y5U8 109 aa0.06□□□□□ -2.4
SCAF11-215ENST00000551391 FGD6Q6ZV73 1430 aa0.05□□□□□ -2.4
SCAF11-215ENST00000551391 NBDYA0A0U1RRE5 68 aa0.05□□□□□ -2.4
SCAF11-215ENST00000551391 A0A1W2PPB8 328 aa0.05□□□□□ -2.4
SCAF11-215ENST00000551391 A0A1W2PRS3 328 aa0.05□□□□□ -2.4
SCAF11-215ENST00000551391 KIR3DP1A8MWS1 328 aa0.05□□□□□ -2.4
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms