RNA–Protein interactions for RNA: ENST00000550800.6

TMEM116-212, Transcript of transmembrane protein 116, humanhuman

APPRIS ALT2 TSL 3

Gene TMEM116, Length 718 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM116-212ENST00000550800 PCSK4Q6UW60 755 aa4.07□□□□□ -1.76
TMEM116-212ENST00000550800 SCGB1D4Q6XE38 83 aa4.07□□□□□ -1.76
TMEM116-212ENST00000550800 EXOC3-AS1Q8N2X6 119 aa4.07□□□□□ -1.76
TMEM116-212ENST00000550800 LINC00311Q8N616 119 aa4.07□□□□□ -1.76
TMEM116-212ENST00000550800 SAP25Q8TEE9 199 aa4.07□□□□□ -1.76
TMEM116-212ENST00000550800 C10orf105Q8TEF2 133 aa4.07□□□□□ -1.76
TMEM116-212ENST00000550800 ZNF503Q96F45 646 aa4.07□□□□□ -1.76
TMEM116-212ENST00000550800 EMC6Q9BV81 110 aa4.07□□□□□ -1.76
TMEM116-212ENST00000550800 Q9UFV3 132 aa4.07□□□□□ -1.76
TMEM116-212ENST00000550800 ZDBF2Q9HCK1 2354 aa4.07□□□□□ -1.76
TMEM116-212ENST00000550800 GTF3C1Q12789 2109 aa4.07□□□□□ -1.76
TMEM116-212ENST00000550800 EML5Q05BV3 1969 aa4.07□□□□□ -1.76
TMEM116-212ENST00000550800 PTPRSQ13332 1948 aa4.07□□□□□ -1.76
TMEM116-212ENST00000550800 CACNA1BQ00975 2339 aa4.06□□□□□ -1.76
TMEM116-212ENST00000550800 IGKV1D-8A0A087WSZ0 117 aa4.06□□□□□ -1.76
TMEM116-212ENST00000550800 DDTLA6NHG4 134 aaPredicted RBP4.06□□□□□ -1.76
TMEM116-212ENST00000550800 LTAP01374 205 aa4.06□□□□□ -1.76
TMEM116-212ENST00000550800 PRSS1P07477 247 aa4.06□□□□□ -1.76
TMEM116-212ENST00000550800 CFC1BP0CG36 223 aa4.06□□□□□ -1.76
TMEM116-212ENST00000550800 CFC1P0CG37 223 aa4.06□□□□□ -1.76
TMEM116-212ENST00000550800 EDDM3BP56851 147 aa4.06□□□□□ -1.76
TMEM116-212ENST00000550800 FGF12P61328 243 aa4.06□□□□□ -1.76
TMEM116-212ENST00000550800 TFF3Q07654 80 aa4.06□□□□□ -1.76
TMEM116-212ENST00000550800 FOXL2NBQ6ZUU3 175 aa4.06□□□□□ -1.76
TMEM116-212ENST00000550800 LINC00173Q6ZV60 143 aa4.06□□□□□ -1.76
TMEM116-212ENST00000550800 LINC00305Q7Z4B0 112 aa4.06□□□□□ -1.76
TMEM116-212ENST00000550800 WFDC3Q8IUB2 231 aa4.06□□□□□ -1.76
TMEM116-212ENST00000550800 Q8N7P7 452 aa4.06□□□□□ -1.76
TMEM116-212ENST00000550800 STPG3Q8N7X2 389 aa4.06□□□□□ -1.76
TMEM116-212ENST00000550800 DYNLRB2Q8TF09 96 aa4.06□□□□□ -1.76
TMEM116-212ENST00000550800 BRK1Q8WUW1 75 aa4.06□□□□□ -1.76
TMEM116-212ENST00000550800 CYYR1Q96J86 154 aa4.06□□□□□ -1.76
TMEM116-212ENST00000550800 FAM19A4Q96LR4 140 aa4.06□□□□□ -1.76
TMEM116-212ENST00000550800 ZNF714Q96N38 554 aa4.06□□□□□ -1.76
TMEM116-212ENST00000550800 C18orf15Q96N68 181 aa4.06□□□□□ -1.76
TMEM116-212ENST00000550800 UPK3BQ9BT76 320 aa4.06□□□□□ -1.76
TMEM116-212ENST00000550800 TMEM243Q9BU79 118 aa4.06□□□□□ -1.76
TMEM116-212ENST00000550800 RETNQ9HD89 108 aa4.06□□□□□ -1.76
TMEM116-212ENST00000550800 TNRC6BQ9UPQ9 1833 aaKnown RBP4.06□□□□□ -1.76
TMEM116-212ENST00000550800 COL4A3Q01955 1670 aa4.06□□□□□ -1.76
TMEM116-212ENST00000550800 SPTBN4Q9H254 2564 aa4.06□□□□□ -1.76
TMEM116-212ENST00000550800 MYO9BQ13459 2157 aa4.05□□□□□ -1.76
TMEM116-212ENST00000550800 A0A0D9SEW6 157 aa4.05□□□□□ -1.76
TMEM116-212ENST00000550800 A0A0J9YX75 114 aa4.05□□□□□ -1.76
TMEM116-212ENST00000550800 LILRA5A6NI73 299 aa4.05□□□□□ -1.76
TMEM116-212ENST00000550800 C17orf100A8MU93 164 aa4.05□□□□□ -1.76
TMEM116-212ENST00000550800 ADM5C9JUS6 153 aa4.05□□□□□ -1.76
TMEM116-212ENST00000550800 SPINK4O60575 86 aa4.05□□□□□ -1.76
TMEM116-212ENST00000550800 IGKV1-5P01602 117 aa4.05□□□□□ -1.76
TMEM116-212ENST00000550800 EFNA4P52798 201 aa4.05□□□□□ -1.76
TMEM116-212ENST00000550800 PAX8Q06710 450 aa4.05□□□□□ -1.76
TMEM116-212ENST00000550800 KLKP1Q107X0 134 aa4.05□□□□□ -1.76
TMEM116-212ENST00000550800 KRTAP27-1Q3LI81 207 aa4.05□□□□□ -1.76
TMEM116-212ENST00000550800 GDF5OSQ5U4N7 250 aa4.05□□□□□ -1.76
TMEM116-212ENST00000550800 RNF144BQ7Z419 303 aa4.05□□□□□ -1.76
TMEM116-212ENST00000550800 Q8IYB0 196 aa4.05□□□□□ -1.76
TMEM116-212ENST00000550800 Q8N8P6 123 aa4.05□□□□□ -1.76
TMEM116-212ENST00000550800 MDS2Q8NDY4 140 aa4.05□□□□□ -1.76
TMEM116-212ENST00000550800 RPUSD1Q9UJJ7 312 aaKnown RBP4.05□□□□□ -1.76
TMEM116-212ENST00000550800 CHD8Q9HCK8 2581 aa4.05□□□□□ -1.76
TMEM116-212ENST00000550800 ATG2BQ96BY7 2078 aa4.04□□□□□ -1.76
TMEM116-212ENST00000550800 KIAA1549Q9HCM3 1950 aa4.04□□□□□ -1.76
TMEM116-212ENST00000550800 RAI1Q7Z5J4 1906 aaPredicted RBP4.04□□□□□ -1.76
TMEM116-212ENST00000550800 A0A096LNJ9 63 aa4.04□□□□□ -1.76
TMEM116-212ENST00000550800 IGKV1-9A0A0C4DH69 117 aa4.04□□□□□ -1.76
TMEM116-212ENST00000550800 SDHAF1A6NFY7 115 aa4.04□□□□□ -1.76
TMEM116-212ENST00000550800 PRSS46E5RG02 174 aa4.04□□□□□ -1.76
TMEM116-212ENST00000550800 M0R135 149 aa4.04□□□□□ -1.76
TMEM116-212ENST00000550800 RFPL3SP0C7P2 107 aa4.04□□□□□ -1.76
TMEM116-212ENST00000550800 GFERP55789 205 aa4.04□□□□□ -1.76
TMEM116-212ENST00000550800 ERCC8Q13216 396 aa4.04□□□□□ -1.76
TMEM116-212ENST00000550800 ORMDL2Q53FV1 153 aa4.04□□□□□ -1.76
TMEM116-212ENST00000550800 ZFP2Q6ZN57 461 aa4.04□□□□□ -1.76
TMEM116-212ENST00000550800 ZNF826PQ6ZT77 177 aa4.04□□□□□ -1.76
TMEM116-212ENST00000550800 MKXQ8IYA7 352 aa4.04□□□□□ -1.76
TMEM116-212ENST00000550800 LYPD1Q8N2G4 141 aa4.04□□□□□ -1.76
TMEM116-212ENST00000550800 KLHDC9Q8NEP7 349 aa4.04□□□□□ -1.76
TMEM116-212ENST00000550800 NFAM1Q8NET5 270 aaPredicted RBP4.04□□□□□ -1.76
TMEM116-212ENST00000550800 TSACCQ96A04 125 aaPredicted RBP4.04□□□□□ -1.76
TMEM116-212ENST00000550800 HES7Q9BYE0 225 aa4.04□□□□□ -1.76
TMEM116-212ENST00000550800 OTORQ9NRC9 128 aa4.04□□□□□ -1.76
TMEM116-212ENST00000550800 CCL28Q9NRJ3 127 aa4.04□□□□□ -1.76
TMEM116-212ENST00000550800 RNF7Q9UBF6 113 aa4.04□□□□□ -1.76
TMEM116-212ENST00000550800 BAHCC1Q9P281 2608 aa4.04□□□□□ -1.76
TMEM116-212ENST00000550800 REV3LO60673 3130 aa4.04□□□□□ -1.76
TMEM116-212ENST00000550800 ADAMTS9Q9P2N4 1935 aa4.03□□□□□ -1.76
TMEM116-212ENST00000550800 DCHS1Q96JQ0 3298 aa4.03□□□□□ -1.76
TMEM116-212ENST00000550800 KRTAP4-8A0A0G2JLE6 195 aa4.03□□□□□ -1.76
TMEM116-212ENST00000550800 WI2-2373I1.2A0A1W2PRP0 233 aa4.03□□□□□ -1.76
TMEM116-212ENST00000550800 RBMY1BA6NDE4 496 aaKnown RBP4.03□□□□□ -1.76
TMEM116-212ENST00000550800 RBMY1EA6NEQ0 496 aaKnown RBP4.03□□□□□ -1.76
TMEM116-212ENST00000550800 UBE2L6O14933 153 aa4.03□□□□□ -1.76
TMEM116-212ENST00000550800 MRPS12O15235 138 aaKnown RBP4.03□□□□□ -1.76
TMEM116-212ENST00000550800 IGHV3-33P01772 117 aa4.03□□□□□ -1.76
TMEM116-212ENST00000550800 RBMY1DP0C7P1 496 aaKnown RBP4.03□□□□□ -1.76
TMEM116-212ENST00000550800 RBMY1A1P0DJD3 496 aaKnown RBP4.03□□□□□ -1.76
TMEM116-212ENST00000550800 RBMY1CP0DJD4 496 aa4.03□□□□□ -1.76
TMEM116-212ENST00000550800 CKS2P33552 79 aa4.03□□□□□ -1.76
TMEM116-212ENST00000550800 DAD1P61803 113 aa4.03□□□□□ -1.76
TMEM116-212ENST00000550800 RBMY1FQ15415 496 aaKnown RBP4.03□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms