RNA–Protein interactions for RNA: ENST00000549049.5

SLC38A1-206, Transcript of solute carrier family 38 member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC38A1, Length 3,196 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC38A1-206ENST00000549049 PRR25Q96S07 402 aa9.67□□□□□ -0.86
SLC38A1-206ENST00000549049 UFC1Q9Y3C8 167 aa9.67□□□□□ -0.86
SLC38A1-206ENST00000549049 HRNRQ86YZ3 2850 aaPredicted RBP9.66□□□□□ -0.86
SLC38A1-206ENST00000549049 RIPPLY3P57055 190 aa9.66□□□□□ -0.86
SLC38A1-206ENST00000549049 MS4A6AQ9H2W1 248 aa9.65□□□□□ -0.86
SLC38A1-206ENST00000549049 TRAV26-2A0A0B4J265 109 aa9.65□□□□□ -0.86
SLC38A1-206ENST00000549049 MRPS12O15235 138 aaKnown RBP9.65□□□□□ -0.86
SLC38A1-206ENST00000549049 CD5LO43866 347 aa9.65□□□□□ -0.86
SLC38A1-206ENST00000549049 HBDP02042 147 aa9.65□□□□□ -0.86
SLC38A1-206ENST00000549049 CLEC3BP05452 202 aa9.65□□□□□ -0.86
SLC38A1-206ENST00000549049 GCSHP23434 173 aa9.65□□□□□ -0.86
SLC38A1-206ENST00000549049 LEPP41159 167 aa9.65□□□□□ -0.86
SLC38A1-206ENST00000549049 JKAMPQ9P055 326 aa9.65□□□□□ -0.86
SLC38A1-206ENST00000549049 G3V318 75 aa9.65□□□□□ -0.87
SLC38A1-206ENST00000549049 LY6LH3BQJ8 138 aa9.65□□□□□ -0.87
SLC38A1-206ENST00000549049 CEACAM3P40198 252 aa9.65□□□□□ -0.87
SLC38A1-206ENST00000549049 OCIAD2Q56VL3 154 aa9.65□□□□□ -0.87
SLC38A1-206ENST00000549049 TIMD4Q96H15 378 aa9.65□□□□□ -0.87
SLC38A1-206ENST00000549049 KLK15Q9H2R5 256 aa9.65□□□□□ -0.87
SLC38A1-206ENST00000549049 A1L4Q6 167 aa9.64□□□□□ -0.87
SLC38A1-206ENST00000549049 HOXB4P17483 251 aaPredicted RBP9.64□□□□□ -0.87
SLC38A1-206ENST00000549049 RPL7P18124 248 aaKnown RBP9.64□□□□□ -0.87
SLC38A1-206ENST00000549049 CLEC19AQ6UXS0 136 aa9.64□□□□□ -0.87
SLC38A1-206ENST00000549049 NOTCH3Q9UM47 2321 aa9.64□□□□□ -0.87
SLC38A1-206ENST00000549049 WI2-2373I1.2A0A1W2PRP0 233 aa9.64□□□□□ -0.87
SLC38A1-206ENST00000549049 F8W735 103 aaPredicted RBP9.64□□□□□ -0.87
SLC38A1-206ENST00000549049 KIR3DS1Q14943 382 aa9.64□□□□□ -0.87
SLC38A1-206ENST00000549049 IL17RELQ6ZVW7 336 aa9.64□□□□□ -0.87
SLC38A1-206ENST00000549049 GTSCR1Q86UQ5 136 aa9.64□□□□□ -0.87
SLC38A1-206ENST00000549049 CFHR4Q92496 578 aa9.64□□□□□ -0.87
SLC38A1-206ENST00000549049 PEF1Q9UBV8 284 aaKnown RBP9.64□□□□□ -0.87
SLC38A1-206ENST00000549049 SMAD5-AS1Q9Y6J3 95 aa9.64□□□□□ -0.87
SLC38A1-206ENST00000549049 LINC01548A6NM66 108 aa9.63□□□□□ -0.87
SLC38A1-206ENST00000549049 CTSGP08311 255 aa9.63□□□□□ -0.87
SLC38A1-206ENST00000549049 DEFB1P60022 68 aa9.63□□□□□ -0.87
SLC38A1-206ENST00000549049 C15orf32Q32M92 178 aa9.63□□□□□ -0.87
SLC38A1-206ENST00000549049 VMO1Q7Z5L0 202 aa9.63□□□□□ -0.87
SLC38A1-206ENST00000549049 IGLV11-55A0A075B6I3 123 aa9.63□□□□□ -0.87
SLC38A1-206ENST00000549049 FCER1GP30273 86 aa9.63□□□□□ -0.87
SLC38A1-206ENST00000549049 TCF15Q12870 199 aa9.63□□□□□ -0.87
SLC38A1-206ENST00000549049 RAB1BQ9H0U4 201 aa9.63□□□□□ -0.87
SLC38A1-206ENST00000549049 C16orf54Q6UWD8 224 aa9.63□□□□□ -0.87
SLC38A1-206ENST00000549049 JMJD8Q96S16 334 aa9.63□□□□□ -0.87
SLC38A1-206ENST00000549049 FOXC2Q99958 501 aa9.63□□□□□ -0.87
SLC38A1-206ENST00000549049 TMEM160Q9NX00 188 aa9.63□□□□□ -0.87
SLC38A1-206ENST00000549049 K7ERJ3 54 aa9.62□□□□□ -0.87
SLC38A1-206ENST00000549049 MEGF9Q9H1U4 602 aa9.62□□□□□ -0.87
SLC38A1-206ENST00000549049 SAPCD1Q5SSQ6 148 aa9.62□□□□□ -0.87
SLC38A1-206ENST00000549049 ZNF562Q6V9R5 426 aa9.62□□□□□ -0.87
SLC38A1-206ENST00000549049 LYPD1Q8N2G4 141 aa9.62□□□□□ -0.87
SLC38A1-206ENST00000549049 IGKV2D-26A0A0A0MRZ7 120 aa9.61□□□□□ -0.87
SLC38A1-206ENST00000549049 ZFP36P26651 326 aaKnown RBP9.61□□□□□ -0.87
SLC38A1-206ENST00000549049 TRGV3P03979 118 aa9.61□□□□□ -0.87
SLC38A1-206ENST00000549049 CDKN1BP46527 198 aa9.61□□□□□ -0.87
SLC38A1-206ENST00000549049 Q6AWC8 147 aa9.61□□□□□ -0.87
SLC38A1-206ENST00000549049 IGF2-ASQ6U949 168 aa9.61□□□□□ -0.87
SLC38A1-206ENST00000549049 TMEM219Q86XT9 240 aa9.61□□□□□ -0.87
SLC38A1-206ENST00000549049 MAP1LC3AQ9H492 121 aa9.61□□□□□ -0.87
SLC38A1-206ENST00000549049 SMAD7O15105 426 aaKnown RBP9.61□□□□□ -0.87
SLC38A1-206ENST00000549049 FGF6P10767 208 aa9.61□□□□□ -0.87
SLC38A1-206ENST00000549049 BMI1P35226 326 aa9.61□□□□□ -0.87
SLC38A1-206ENST00000549049 TMEM158Q8WZ71 300 aa9.6□□□□□ -0.87
SLC38A1-206ENST00000549049 VKORC1Q9BQB6 163 aa9.6□□□□□ -0.87
SLC38A1-206ENST00000549049 A0A0G2JLM5 398 aa9.6□□□□□ -0.87
SLC38A1-206ENST00000549049 FABP5P3A8MUU1 101 aa9.6□□□□□ -0.87
SLC38A1-206ENST00000549049 TNFRSF6BO95407 300 aa9.6□□□□□ -0.87
SLC38A1-206ENST00000549049 IGHG4P01861 327 aa9.6□□□□□ -0.87
SLC38A1-206ENST00000549049 HIF1ANQ9NWT6 349 aa9.6□□□□□ -0.87
SLC38A1-206ENST00000549049 IGHV7-81A0A0B4J1V7 117 aa9.59□□□□□ -0.87
SLC38A1-206ENST00000549049 A0A1B0GW15 77 aa9.59□□□□□ -0.87
SLC38A1-206ENST00000549049 PRTN3P24158 256 aa9.59□□□□□ -0.87
SLC38A1-206ENST00000549049 RPL11P62913 178 aaKnown RBP9.59□□□□□ -0.87
SLC38A1-206ENST00000549049 COTL1Q14019 142 aa9.59□□□□□ -0.87
SLC38A1-206ENST00000549049 RNF5Q99942 180 aa9.59□□□□□ -0.87
SLC38A1-206ENST00000549049 A6NDN8 102 aa9.59□□□□□ -0.87
SLC38A1-206ENST00000549049 RPL24P83731 157 aaKnown RBP9.59□□□□□ -0.87
SLC38A1-206ENST00000549049 ZNF493Q6ZR52 646 aa9.59□□□□□ -0.87
SLC38A1-206ENST00000549049 S100A7AQ86SG5 101 aa9.59□□□□□ -0.87
SLC38A1-206ENST00000549049 ATP6V0E1O15342 81 aa9.59□□□□□ -0.87
SLC38A1-206ENST00000549049 EFNA4P52798 201 aa9.59□□□□□ -0.87
SLC38A1-206ENST00000549049 PDE6HQ13956 83 aa9.59□□□□□ -0.87
SLC38A1-206ENST00000549049 LGALS9BQ3B8N2 356 aa9.59□□□□□ -0.87
SLC38A1-206ENST00000549049 LGALS9CQ6DKI2 356 aa9.59□□□□□ -0.87
SLC38A1-206ENST00000549049 LCNL1Q6ZST4 164 aa9.59□□□□□ -0.87
SLC38A1-206ENST00000549049 MTURNQ8N3F0 131 aa9.59□□□□□ -0.87
SLC38A1-206ENST00000549049 C11orf21Q9P2W6 132 aa9.59□□□□□ -0.87
SLC38A1-206ENST00000549049 AGRNO00468 2067 aa9.58□□□□□ -0.88
SLC38A1-206ENST00000549049 NDUFA3O95167 84 aa9.58□□□□□ -0.88
SLC38A1-206ENST00000549049 IGF1P05019 195 aa9.58□□□□□ -0.88
SLC38A1-206ENST00000549049 DTX2Q86UW9 622 aa9.58□□□□□ -0.88
SLC38A1-206ENST00000549049 OR11H6Q8NGC7 330 aa9.58□□□□□ -0.88
SLC38A1-206ENST00000549049 GLMPQ8WWB7 406 aa9.58□□□□□ -0.88
SLC38A1-206ENST00000549049 USP9YO00507 2555 aaPredicted RBP9.58□□□□□ -0.88
SLC38A1-206ENST00000549049 ZC2HC1BQ5TFG8 222 aa9.58□□□□□ -0.88
SLC38A1-206ENST00000549049 OR2K2Q8NGT1 345 aa9.58□□□□□ -0.88
SLC38A1-206ENST00000549049 WFDC12Q8WWY7 111 aa9.58□□□□□ -0.88
SLC38A1-206ENST00000549049 RNF185Q96GF1 192 aa9.58□□□□□ -0.88
SLC38A1-206ENST00000549049 SPCS1Q9Y6A9 102 aa9.58□□□□□ -0.88
SLC38A1-206ENST00000549049 TRAV40A0A0B4J280 105 aa9.57□□□□□ -0.88
SLC38A1-206ENST00000549049 FXYD2P54710 66 aa9.57□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms