RNA–Protein interactions for RNA: ENST00000548296.1

RPAP3-206, Transcript of RNA polymerase II associated protein 3, humanhuman

TSL 3

Gene RPAP3, Length 567 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAP3-206ENST00000548296 PRELID3AQ96N28 172 aa0.92□□□□□ -2.26
RPAP3-206ENST00000548296 TCOF1Q13428 1488 aaKnown RBP0.92□□□□□ -2.26
RPAP3-206ENST00000548296 GPR98Q8WXG9 6306 aa0.91□□□□□ -2.26
RPAP3-206ENST00000548296 ZGRF1Q86YA3 2104 aa0.91□□□□□ -2.26
RPAP3-206ENST00000548296 TMEM128Q5BJH2 165 aa0.91□□□□□ -2.26
RPAP3-206ENST00000548296 HRCT1Q6UXD1 115 aa0.91□□□□□ -2.26
RPAP3-206ENST00000548296 LINC00305Q7Z4B0 112 aa0.91□□□□□ -2.26
RPAP3-206ENST00000548296 SBSPONQ8IVN8 264 aa0.91□□□□□ -2.26
RPAP3-206ENST00000548296 OR10AC1Q8NH08 325 aa0.91□□□□□ -2.26
RPAP3-206ENST00000548296 LXNQ9BS40 222 aa0.91□□□□□ -2.26
RPAP3-206ENST00000548296 FER1L6Q2WGJ9 1857 aa0.9□□□□□ -2.26
RPAP3-206ENST00000548296 PRORSD1PA6NEY8 169 aa0.9□□□□□ -2.27
RPAP3-206ENST00000548296 TRACP01848 142 aa0.9□□□□□ -2.27
RPAP3-206ENST00000548296 SRP9P49458 86 aaKnown RBP0.9□□□□□ -2.27
RPAP3-206ENST00000548296 ZCCHC23Q6ZST2 131 aa0.9□□□□□ -2.27
RPAP3-206ENST00000548296 MUC16Q8WXI7 14507 aa0.89□□□□□ -2.27
RPAP3-206ENST00000548296 TRAV13-1A0A0B4J241 112 aa0.89□□□□□ -2.27
RPAP3-206ENST00000548296 C5orf58C9J3I9 102 aa0.89□□□□□ -2.27
RPAP3-206ENST00000548296 H3BMG7 143 aa0.89□□□□□ -2.27
RPAP3-206ENST00000548296 SAA1P0DJI8 122 aaPredicted RBP0.89□□□□□ -2.27
RPAP3-206ENST00000548296 TPT1P13693 172 aaKnown RBP0.89□□□□□ -2.27
RPAP3-206ENST00000548296 RPL7P18124 248 aaKnown RBP0.89□□□□□ -2.27
RPAP3-206ENST00000548296 MAXP61244 160 aa0.89□□□□□ -2.27
RPAP3-206ENST00000548296 SAMD13Q5VXD3 122 aa0.89□□□□□ -2.27
RPAP3-206ENST00000548296 MORN4Q8NDC4 146 aa0.89□□□□□ -2.27
RPAP3-206ENST00000548296 DLC1Q96QB1 1528 aa0.89□□□□□ -2.27
RPAP3-206ENST00000548296 FBN2P35556 2912 aa0.88□□□□□ -2.27
RPAP3-206ENST00000548296 USP54Q70EL1 1684 aa0.88□□□□□ -2.27
RPAP3-206ENST00000548296 A6NN06 94 aa0.88□□□□□ -2.27
RPAP3-206ENST00000548296 OR5AK2Q8NH90 309 aa0.88□□□□□ -2.27
RPAP3-206ENST00000548296 GRPEL2Q8TAA5 225 aa0.88□□□□□ -2.27
RPAP3-206ENST00000548296 CLEC2BQ92478 149 aa0.88□□□□□ -2.27
RPAP3-206ENST00000548296 NIT2Q9NQR4 276 aa0.88□□□□□ -2.27
RPAP3-206ENST00000548296 MUC4Q99102 2169 aa0.87□□□□□ -2.27
RPAP3-206ENST00000548296 KIAA1549LQ6ZVL6 1849 aa0.87□□□□□ -2.27
RPAP3-206ENST00000548296 PDE6GP18545 87 aa0.87□□□□□ -2.27
RPAP3-206ENST00000548296 S100GP29377 79 aa0.87□□□□□ -2.27
RPAP3-206ENST00000548296 IZUMO2Q6UXV1 221 aa0.87□□□□□ -2.27
RPAP3-206ENST00000548296 CASC2Q6XLA1 102 aa0.87□□□□□ -2.27
RPAP3-206ENST00000548296 CCDC115Q96NT0 180 aa0.87□□□□□ -2.27
RPAP3-206ENST00000548296 TRAPPC2LQ9UL33 140 aa0.87□□□□□ -2.27
RPAP3-206ENST00000548296 NDUFAF1Q9Y375 327 aa0.87□□□□□ -2.27
RPAP3-206ENST00000548296 FAM135BQ49AJ0 1406 aa0.87□□□□□ -2.27
RPAP3-206ENST00000548296 AHNAK2Q8IVF2 5795 aa0.87□□□□□ -2.27
RPAP3-206ENST00000548296 A2MP01023 1474 aa0.86□□□□□ -2.27
RPAP3-206ENST00000548296 TRAV23DV6A0A075B6W5 121 aa0.86□□□□□ -2.27
RPAP3-206ENST00000548296 LOC107984640A0A0U1RRK4 108 aa0.86□□□□□ -2.27
RPAP3-206ENST00000548296 H0YJX3 145 aa0.86□□□□□ -2.27
RPAP3-206ENST00000548296 CD14P08571 375 aa0.86□□□□□ -2.27
RPAP3-206ENST00000548296 NBEAP1P0C6P0 100 aa0.86□□□□□ -2.27
RPAP3-206ENST00000548296 RPS3P23396 243 aaKnown RBP eCLIP0.86□□□□□ -2.27
RPAP3-206ENST00000548296 FOXA3P55318 350 aaPredicted RBP0.86□□□□□ -2.27
RPAP3-206ENST00000548296 RPS28P62857 69 aaKnown RBP0.86□□□□□ -2.27
RPAP3-206ENST00000548296 OCIAD2Q56VL3 154 aa0.86□□□□□ -2.27
RPAP3-206ENST00000548296 TEX29Q8N6K0 151 aa0.86□□□□□ -2.27
RPAP3-206ENST00000548296 NAT14Q8WUY8 206 aa0.86□□□□□ -2.27
RPAP3-206ENST00000548296 SKA2Q8WVK7 121 aaPredicted RBP0.86□□□□□ -2.27
RPAP3-206ENST00000548296 CIB3Q96Q77 187 aaPredicted RBP0.86□□□□□ -2.27
RPAP3-206ENST00000548296 NABP2Q9BQ15 211 aa0.86□□□□□ -2.27
RPAP3-206ENST00000548296 CBLN4Q9NTU7 201 aa0.86□□□□□ -2.27
RPAP3-206ENST00000548296 XIRP1Q702N8 1843 aaKnown RBP0.85□□□□□ -2.27
RPAP3-206ENST00000548296 C3orf85A0A1B0GTC6 90 aa0.85□□□□□ -2.27
RPAP3-206ENST00000548296 GNG14A0A1W2PPG7 69 aa0.85□□□□□ -2.27
RPAP3-206ENST00000548296 TSTD3H0UI37 97 aa0.85□□□□□ -2.27
RPAP3-206ENST00000548296 IGHV3-30P01768 117 aa0.85□□□□□ -2.27
RPAP3-206ENST00000548296 IGHV3-30-5P0DP03 117 aa0.85□□□□□ -2.27
RPAP3-206ENST00000548296 CCL4P13236 92 aa0.85□□□□□ -2.27
RPAP3-206ENST00000548296 CRYGSP22914 178 aa0.85□□□□□ -2.27
RPAP3-206ENST00000548296 CCSMST1Q4G0I0 132 aa0.85□□□□□ -2.27
RPAP3-206ENST00000548296 TMEM35BQ8NCS4 154 aa0.85□□□□□ -2.27
RPAP3-206ENST00000548296 BOKQ9UMX3 212 aaPredicted RBP0.85□□□□□ -2.27
RPAP3-206ENST00000548296 MPC1Q9Y5U8 109 aa0.85□□□□□ -2.27
RPAP3-206ENST00000548296 NOTCH1P46531 2555 aa0.84□□□□□ -2.27
RPAP3-206ENST00000548296 TRAV16A0A0A6YYK6 109 aaPredicted RBP0.84□□□□□ -2.27
RPAP3-206ENST00000548296 LOC107986453A0A1B0GWG9 222 aa0.84□□□□□ -2.27
RPAP3-206ENST00000548296 K7EIL1 84 aa0.84□□□□□ -2.27
RPAP3-206ENST00000548296 RPL22P35268 128 aaKnown RBP0.84□□□□□ -2.27
RPAP3-206ENST00000548296 FXYD4P59646 89 aa0.84□□□□□ -2.27
RPAP3-206ENST00000548296 NEDD8Q15843 81 aa0.84□□□□□ -2.27
RPAP3-206ENST00000548296 GINS2Q9Y248 185 aa0.84□□□□□ -2.27
RPAP3-206ENST00000548296 HSPB11Q9Y547 144 aa0.84□□□□□ -2.27
RPAP3-206ENST00000548296 ZNF469Q96JG9 3925 aaPredicted RBP0.83□□□□□ -2.28
RPAP3-206ENST00000548296 DNAJB13P59910 316 aa0.83□□□□□ -2.28
RPAP3-206ENST00000548296 TAC4Q86UU9 113 aa0.83□□□□□ -2.28
RPAP3-206ENST00000548296 C10orf111Q8N326 155 aa0.83□□□□□ -2.28
RPAP3-206ENST00000548296 C5orf17Q8NAS9 161 aa0.83□□□□□ -2.28
RPAP3-206ENST00000548296 TMEM229BQ8NBD8 167 aa0.83□□□□□ -2.28
RPAP3-206ENST00000548296 OR5A2Q8NGI9 324 aa0.83□□□□□ -2.28
RPAP3-206ENST00000548296 OR51A4Q8NGJ6 313 aa0.83□□□□□ -2.28
RPAP3-206ENST00000548296 LIMD2Q9BT23 127 aa0.83□□□□□ -2.28
RPAP3-206ENST00000548296 C19orf12Q9NSK7 152 aa0.83□□□□□ -2.28
RPAP3-206ENST00000548296 FKBP11Q9NYL4 201 aa0.83□□□□□ -2.28
RPAP3-206ENST00000548296 ANK1P16157 1881 aa0.83□□□□□ -2.28
RPAP3-206ENST00000548296 NINQ8N4C6 2090 aa0.82□□□□□ -2.28
RPAP3-206ENST00000548296 SPTBP11277 2137 aa0.82□□□□□ -2.28
RPAP3-206ENST00000548296 SLC25A4P12235 298 aa0.82□□□□□ -2.28
RPAP3-206ENST00000548296 LSM3P62310 102 aaKnown RBP0.82□□□□□ -2.28
RPAP3-206ENST00000548296 DR1Q01658 176 aa0.82□□□□□ -2.28
RPAP3-206ENST00000548296 ATOH7Q8N100 152 aa0.82□□□□□ -2.28
RPAP3-206ENST00000548296 MYH1P12882 1939 aa0.81□□□□□ -2.28
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms