RNA–Protein interactions for RNA: ENST00000546849.1

NPAS3-204, Transcript of neuronal PAS domain protein 3, humanhuman

TSL 3

Gene NPAS3, Length 464 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3-204ENST00000546849 ARL2-SNX15V9GYD0 113 aa3.4□□□□□ -1.87
NPAS3-204ENST00000546849 EML5Q05BV3 1969 aa3.4□□□□□ -1.87
NPAS3-204ENST00000546849 TET2Q6N021 2002 aaPredicted RBP3.39□□□□□ -1.87
NPAS3-204ENST00000546849 CELSR1Q9NYQ6 3014 aa3.39□□□□□ -1.87
NPAS3-204ENST00000546849 NCOA6Q14686 2063 aaPredicted RBP3.39□□□□□ -1.87
NPAS3-204ENST00000546849 LAMA1P25391 3075 aa3.39□□□□□ -1.87
NPAS3-204ENST00000546849 TRGV10A0A0A0MS01 117 aa3.39□□□□□ -1.87
NPAS3-204ENST00000546849 IGHV1-3A0A0C4DH29 117 aa3.39□□□□□ -1.87
NPAS3-204ENST00000546849 MAP1LC3B2A6NCE7 125 aa3.39□□□□□ -1.87
NPAS3-204ENST00000546849 FAM24AA6NFZ4 105 aa3.39□□□□□ -1.87
NPAS3-204ENST00000546849 ARGFXA6NJG6 315 aa3.39□□□□□ -1.87
NPAS3-204ENST00000546849 H3BQ15 152 aa3.39□□□□□ -1.87
NPAS3-204ENST00000546849 H7BYZ3 331 aa3.39□□□□□ -1.87
NPAS3-204ENST00000546849 CST7O76096 145 aa3.39□□□□□ -1.87
NPAS3-204ENST00000546849 OR2H2O95918 312 aa3.39□□□□□ -1.87
NPAS3-204ENST00000546849 CXorf1O96002 111 aa3.39□□□□□ -1.87
NPAS3-204ENST00000546849 CRYBA1P05813 215 aa3.39□□□□□ -1.87
NPAS3-204ENST00000546849 FABP1P07148 127 aa3.39□□□□□ -1.87
NPAS3-204ENST00000546849 OR13C7P0DN81 318 aa3.39□□□□□ -1.87
NPAS3-204ENST00000546849 NQO2P16083 231 aa3.39□□□□□ -1.87
NPAS3-204ENST00000546849 PMCHP20382 165 aa3.39□□□□□ -1.87
NPAS3-204ENST00000546849 IL3RAP26951 378 aa3.39□□□□□ -1.87
NPAS3-204ENST00000546849 MYCNOSP40205 109 aa3.39□□□□□ -1.87
NPAS3-204ENST00000546849 RPL35P42766 123 aaKnown RBP3.39□□□□□ -1.87
NPAS3-204ENST00000546849 GABRA2P47869 451 aa3.39□□□□□ -1.87
NPAS3-204ENST00000546849 IDH3GP51553 393 aaPredicted RBP3.39□□□□□ -1.87
NPAS3-204ENST00000546849 DYNLT3P51808 116 aa3.39□□□□□ -1.87
NPAS3-204ENST00000546849 CEBPGP53567 150 aa3.39□□□□□ -1.87
NPAS3-204ENST00000546849 SPCS3P61009 180 aa3.39□□□□□ -1.87
NPAS3-204ENST00000546849 RAB4BP61018 213 aa3.39□□□□□ -1.87
NPAS3-204ENST00000546849 RHOBP62745 196 aa3.39□□□□□ -1.87
NPAS3-204ENST00000546849 MEF2BQ02080 365 aaPredicted RBP3.39□□□□□ -1.87
NPAS3-204ENST00000546849 TNFRSF9Q07011 255 aa3.39□□□□□ -1.87
NPAS3-204ENST00000546849 LRRC75BQ2VPJ9 315 aa3.39□□□□□ -1.87
NPAS3-204ENST00000546849 SPANXN5Q5MJ07 72 aa3.39□□□□□ -1.87
NPAS3-204ENST00000546849 MRPL30Q8TCC3 161 aaKnown RBP3.39□□□□□ -1.87
NPAS3-204ENST00000546849 DTD1Q8TEA8 209 aa3.39□□□□□ -1.87
NPAS3-204ENST00000546849 KCNS1Q96KK3 526 aa3.39□□□□□ -1.87
NPAS3-204ENST00000546849 TP53RKQ96S44 253 aa3.39□□□□□ -1.87
NPAS3-204ENST00000546849 MAP1LC3BQ9GZQ8 125 aa3.39□□□□□ -1.87
NPAS3-204ENST00000546849 WDR61Q9GZS3 305 aaKnown RBP3.39□□□□□ -1.87
NPAS3-204ENST00000546849 GAL3ST2Q9H3Q3 398 aa3.39□□□□□ -1.87
NPAS3-204ENST00000546849 TMEM167BQ9NRX6 74 aa3.39□□□□□ -1.87
NPAS3-204ENST00000546849 GNG13Q9P2W3 67 aa3.39□□□□□ -1.87
NPAS3-204ENST00000546849 PRNDQ9UKY0 176 aa3.39□□□□□ -1.87
NPAS3-204ENST00000546849 PCDH15Q96QU1 1955 aa3.39□□□□□ -1.87
NPAS3-204ENST00000546849 MGAQ8IWI9 3026 aa3.39□□□□□ -1.87
NPAS3-204ENST00000546849 FBN1P35555 2871 aaKnown RBP3.39□□□□□ -1.87
NPAS3-204ENST00000546849 HIVEP3Q5T1R4 2406 aa3.39□□□□□ -1.87
NPAS3-204ENST00000546849 TRBV24-1A0A075B6N3 115 aa3.38□□□□□ -1.87
NPAS3-204ENST00000546849 IGKV1-27A0A075B6S5 117 aa3.38□□□□□ -1.87
NPAS3-204ENST00000546849 IGKV1-12A0A0C4DH73 117 aa3.38□□□□□ -1.87
NPAS3-204ENST00000546849 SPRR5A0A1B0GTR4 108 aa3.38□□□□□ -1.87
NPAS3-204ENST00000546849 MDFIC2A0A1B0GVS7 189 aa3.38□□□□□ -1.87
NPAS3-204ENST00000546849 hADV38S2A0JD32 116 aa3.38□□□□□ -1.87
NPAS3-204ENST00000546849 YPEL1O60688 119 aa3.38□□□□□ -1.87
NPAS3-204ENST00000546849 IGKV1D-12P01611 117 aa3.38□□□□□ -1.87
NPAS3-204ENST00000546849 APOA2P02652 100 aa3.38□□□□□ -1.87
NPAS3-204ENST00000546849 MT-ND6P03923 174 aa3.38□□□□□ -1.87
NPAS3-204ENST00000546849 FBP1P09467 338 aa3.38□□□□□ -1.87
NPAS3-204ENST00000546849 SCTP09683 121 aa3.38□□□□□ -1.87
NPAS3-204ENST00000546849 FGF7P21781 194 aa3.38□□□□□ -1.87
NPAS3-204ENST00000546849 CFHR2P36980 270 aa3.38□□□□□ -1.87
NPAS3-204ENST00000546849 CDC34P49427 236 aaPredicted RBP3.38□□□□□ -1.87
NPAS3-204ENST00000546849 KLF3P57682 345 aaPredicted RBP3.38□□□□□ -1.87
NPAS3-204ENST00000546849 RANP62826 216 aaKnown RBP3.38□□□□□ -1.87
NPAS3-204ENST00000546849 ERHP84090 104 aaKnown RBP3.38□□□□□ -1.87
NPAS3-204ENST00000546849 DEFA6Q01524 100 aa3.38□□□□□ -1.87
NPAS3-204ENST00000546849 FABP9Q0Z7S8 132 aa3.38□□□□□ -1.87
NPAS3-204ENST00000546849 TIMM23BQ5SRD1 257 aa3.38□□□□□ -1.87
NPAS3-204ENST00000546849 HES3Q5TGS1 186 aa3.38□□□□□ -1.87
NPAS3-204ENST00000546849 OR2T2Q6IF00 324 aa3.38□□□□□ -1.87
NPAS3-204ENST00000546849 CYP2G1PQ6ZSU1 146 aa3.38□□□□□ -1.87
NPAS3-204ENST00000546849 FAM24BQ8N5W8 94 aa3.38□□□□□ -1.87
NPAS3-204ENST00000546849 CNEP1R1Q8N9A8 125 aa3.38□□□□□ -1.87
NPAS3-204ENST00000546849 OR4A5Q8NH83 315 aa3.38□□□□□ -1.87
NPAS3-204ENST00000546849 CLDND2Q8NHS1 167 aa3.38□□□□□ -1.87
NPAS3-204ENST00000546849 HIST1H2BAQ96A08 127 aa3.38□□□□□ -1.87
NPAS3-204ENST00000546849 S100PBPQ96BU1 408 aa3.38□□□□□ -1.87
NPAS3-204ENST00000546849 GPR146Q96CH1 333 aa3.38□□□□□ -1.87
NPAS3-204ENST00000546849 YPEL2Q96QA6 119 aa3.38□□□□□ -1.87
NPAS3-204ENST00000546849 SMIM7Q9BQ49 75 aa3.38□□□□□ -1.87
NPAS3-204ENST00000546849 C1QTNF6Q9BXI9 259 aa3.38□□□□□ -1.87
NPAS3-204ENST00000546849 NPVFQ9HCQ7 196 aa3.38□□□□□ -1.87
NPAS3-204ENST00000546849 LY96Q9Y6Y9 160 aa3.38□□□□□ -1.87
NPAS3-204ENST00000546849 ANKHD1Q8IWZ3 2542 aaKnown RBP3.38□□□□□ -1.87
NPAS3-204ENST00000546849 KIAA1549Q9HCM3 1950 aa3.38□□□□□ -1.87
NPAS3-204ENST00000546849 PDZD2O15018 2839 aa3.38□□□□□ -1.87
NPAS3-204ENST00000546849 KNTC1P50748 2209 aa3.38□□□□□ -1.87
NPAS3-204ENST00000546849 BOD1L1Q8NFC6 3051 aa3.38□□□□□ -1.87
NPAS3-204ENST00000546849 OTOGQ6ZRI0 2925 aa3.37□□□□□ -1.87
NPAS3-204ENST00000546849 JMJD1CQ15652 2540 aa3.37□□□□□ -1.87
NPAS3-204ENST00000546849 CNTRLQ7Z7A1 2325 aa3.37□□□□□ -1.87
NPAS3-204ENST00000546849 MYO7BQ6PIF6 2116 aa3.37□□□□□ -1.87
NPAS3-204ENST00000546849 STAB1Q9NY15 2570 aa3.37□□□□□ -1.87
NPAS3-204ENST00000546849 NIPBLQ6KC79 2804 aaeCLIP3.37□□□□□ -1.87
NPAS3-204ENST00000546849 ADGRG4Q8IZF6 3080 aa3.37□□□□□ -1.87
NPAS3-204ENST00000546849 TRAV38-1A0A0B4J264 116 aa3.37□□□□□ -1.87
NPAS3-204ENST00000546849 IGSF23A1L1A6 192 aa3.37□□□□□ -1.87
NPAS3-204ENST00000546849 ZNF729A6NN14 1252 aaPredicted RBP3.37□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 56.4 ms