RNA–Protein interactions for RNA: ENST00000546816.5

CCDC38-204, Transcript of coiled-coil domain containing 38, humanhuman

TSL 2

Gene CCDC38, Length 465 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38-204ENST00000546816 Q86TA4 180 aa0.13□□□□□ -2.39
CCDC38-204ENST00000546816 BIN3Q9NQY0 253 aa0.13□□□□□ -2.39
CCDC38-204ENST00000546816 NAT8BQ9UHF3 227 aa0.13□□□□□ -2.39
CCDC38-204ENST00000546816 MEGF8Q7Z7M0 2845 aa0.13□□□□□ -2.39
CCDC38-204ENST00000546816 ZGRF1Q86YA3 2104 aa0.13□□□□□ -2.39
CCDC38-204ENST00000546816 TECPR2O15040 1411 aa0.13□□□□□ -2.39
CCDC38-204ENST00000546816 SSPOA2VEC9 5147 aa0.12□□□□□ -2.39
CCDC38-204ENST00000546816 NAV2Q8IVL1 2488 aa0.12□□□□□ -2.39
CCDC38-204ENST00000546816 TRDV1A0A1B0GX56 115 aa0.12□□□□□ -2.39
CCDC38-204ENST00000546816 H7BYZ3 331 aa0.12□□□□□ -2.39
CCDC38-204ENST00000546816 CROCCP2Q86T23 111 aa0.12□□□□□ -2.39
CCDC38-204ENST00000546816 FAM24BQ8N5W8 94 aa0.12□□□□□ -2.39
CCDC38-204ENST00000546816 OR4B1Q8NGF8 309 aa0.12□□□□□ -2.39
CCDC38-204ENST00000546816 GRPEL2Q8TAA5 225 aa0.12□□□□□ -2.39
CCDC38-204ENST00000546816 ISOC1Q96CN7 298 aa0.12□□□□□ -2.39
CCDC38-204ENST00000546816 MED11Q9P086 117 aa0.12□□□□□ -2.39
CCDC38-204ENST00000546816 ZDBF2Q9HCK1 2354 aa0.11□□□□□ -2.39
CCDC38-204ENST00000546816 PTPRDP23468 1912 aa0.11□□□□□ -2.39
CCDC38-204ENST00000546816 PPP5D1E7EU14 171 aa0.11□□□□□ -2.39
CCDC38-204ENST00000546816 TRACP01848 142 aa0.11□□□□□ -2.39
CCDC38-204ENST00000546816 KDELR1P24390 212 aa0.11□□□□□ -2.39
CCDC38-204ENST00000546816 SERPINB1P30740 379 aa0.11□□□□□ -2.39
CCDC38-204ENST00000546816 NEDD8Q15843 81 aa0.11□□□□□ -2.39
CCDC38-204ENST00000546816 C3orf33Q6P1S2 294 aa0.11□□□□□ -2.39
CCDC38-204ENST00000546816 IZUMO2Q6UXV1 221 aa0.11□□□□□ -2.39
CCDC38-204ENST00000546816 CASC2Q6XLA1 102 aa0.11□□□□□ -2.39
CCDC38-204ENST00000546816 LPAR5Q9H1C0 372 aa0.11□□□□□ -2.39
CCDC38-204ENST00000546816 GID8Q9NWU2 228 aa0.11□□□□□ -2.39
CCDC38-204ENST00000546816 SYNMO15061 1565 aa0.11□□□□□ -2.39
CCDC38-204ENST00000546816 ROCK1Q13464 1354 aa0.1□□□□□ -2.39
CCDC38-204ENST00000546816 MAP1LC3B2A6NCE7 125 aa0.1□□□□□ -2.39
CCDC38-204ENST00000546816 GABARAPH6UMI1 98 aa0.1□□□□□ -2.39
CCDC38-204ENST00000546816 SULT1C4O75897 302 aa0.1□□□□□ -2.39
CCDC38-204ENST00000546816 FABP2P12104 132 aa0.1□□□□□ -2.39
CCDC38-204ENST00000546816 CAV3P56539 151 aa0.1□□□□□ -2.39
CCDC38-204ENST00000546816 NDUFA6P56556 154 aa0.1□□□□□ -2.39
CCDC38-204ENST00000546816 TMEM78Q5T7P6 136 aa0.1□□□□□ -2.39
CCDC38-204ENST00000546816 XAF1Q6GPH4 301 aa0.1□□□□□ -2.39
CCDC38-204ENST00000546816 DCUN1D2Q6PH85 259 aa0.1□□□□□ -2.39
CCDC38-204ENST00000546816 DEFB132Q7Z7B7 95 aa0.1□□□□□ -2.39
CCDC38-204ENST00000546816 C5orf17Q8NAS9 161 aa0.1□□□□□ -2.39
CCDC38-204ENST00000546816 OR5AK2Q8NH90 309 aa0.1□□□□□ -2.39
CCDC38-204ENST00000546816 DYDC1Q8WWB3 177 aa0.1□□□□□ -2.39
CCDC38-204ENST00000546816 CLEC2BQ92478 149 aa0.1□□□□□ -2.39
CCDC38-204ENST00000546816 MYH2Q9UKX2 1941 aa0.1□□□□□ -2.39
CCDC38-204ENST00000546816 CTTNBP2Q8WZ74 1663 aa0.1□□□□□ -2.39
CCDC38-204ENST00000546816 MAST4O15021 2626 aa0.09□□□□□ -2.39
CCDC38-204ENST00000546816 C3orf85A0A1B0GTC6 90 aa0.09□□□□□ -2.4
CCDC38-204ENST00000546816 BCL2P10415 239 aa0.09□□□□□ -2.4
CCDC38-204ENST00000546816 SDC2P34741 201 aa0.09□□□□□ -2.4
CCDC38-204ENST00000546816 MAXP61244 160 aa0.09□□□□□ -2.4
CCDC38-204ENST00000546816 CSAG1Q6PB30 78 aa0.09□□□□□ -2.4
CCDC38-204ENST00000546816 ANGPTL5Q86XS5 388 aa0.09□□□□□ -2.4
CCDC38-204ENST00000546816 OR5H6Q8NGV6 325 aa0.09□□□□□ -2.4
CCDC38-204ENST00000546816 PRELID3AQ96N28 172 aa0.09□□□□□ -2.4
CCDC38-204ENST00000546816 CIB3Q96Q77 187 aaPredicted RBP0.09□□□□□ -2.4
CCDC38-204ENST00000546816 TCOF1Q13428 1488 aaKnown RBP0.09□□□□□ -2.4
CCDC38-204ENST00000546816 ZCCHC11Q5TAX3 1644 aaKnown RBP0.09□□□□□ -2.4
CCDC38-204ENST00000546816 TNCP24821 2201 aa0.09□□□□□ -2.4
CCDC38-204ENST00000546816 CACNA1EQ15878 2313 aa0.08□□□□□ -2.4
CCDC38-204ENST00000546816 TRBV27A0A0K0K1C4 114 aa0.08□□□□□ -2.4
CCDC38-204ENST00000546816 C5orf58C9J3I9 102 aa0.08□□□□□ -2.4
CCDC38-204ENST00000546816 E5RI56 91 aa0.08□□□□□ -2.4
CCDC38-204ENST00000546816 LY6G6CO95867 125 aa0.08□□□□□ -2.4
CCDC38-204ENST00000546816 GYPBP06028 91 aa0.08□□□□□ -2.4
CCDC38-204ENST00000546816 SAA1P0DJI8 122 aaPredicted RBP0.08□□□□□ -2.4
CCDC38-204ENST00000546816 TPT1P13693 172 aaKnown RBP0.08□□□□□ -2.4
CCDC38-204ENST00000546816 S100A11P31949 105 aa0.08□□□□□ -2.4
CCDC38-204ENST00000546816 GNG10P50151 68 aa0.08□□□□□ -2.4
CCDC38-204ENST00000546816 QRFPP83859 136 aa0.08□□□□□ -2.4
CCDC38-204ENST00000546816 GLYATL3Q5SZD4 288 aa0.08□□□□□ -2.4
CCDC38-204ENST00000546816 TRIQKQ629K1 86 aa0.08□□□□□ -2.4
CCDC38-204ENST00000546816 TCTEX1D1Q8N7M0 179 aa0.08□□□□□ -2.4
CCDC38-204ENST00000546816 TSKUQ8WUA8 353 aa0.08□□□□□ -2.4
CCDC38-204ENST00000546816 NABP2Q9BQ15 211 aa0.08□□□□□ -2.4
CCDC38-204ENST00000546816 LAMTOR2Q9Y2Q5 125 aa0.08□□□□□ -2.4
CCDC38-204ENST00000546816 DSPPQ9NZW4 1301 aa0.08□□□□□ -2.4
CCDC38-204ENST00000546816 NBDYA0A0U1RRE5 68 aa0.07□□□□□ -2.4
CCDC38-204ENST00000546816 A0A1W2PRE2 83 aa0.07□□□□□ -2.4
CCDC38-204ENST00000546816 EVI2AP22794 236 aa0.07□□□□□ -2.4
CCDC38-204ENST00000546816 RPS3P23396 243 aaKnown RBP eCLIP0.07□□□□□ -2.4
CCDC38-204ENST00000546816 G0S2P27469 103 aa0.07□□□□□ -2.4
CCDC38-204ENST00000546816 SPINK13Q1W4C9 94 aa0.07□□□□□ -2.4
CCDC38-204ENST00000546816 ASB16-AS1Q495Z4 193 aa0.07□□□□□ -2.4
CCDC38-204ENST00000546816 CCSMST1Q4G0I0 132 aa0.07□□□□□ -2.4
CCDC38-204ENST00000546816 LINC00305Q7Z4B0 112 aa0.07□□□□□ -2.4
CCDC38-204ENST00000546816 STX12Q86Y82 276 aa0.07□□□□□ -2.4
CCDC38-204ENST00000546816 TMEM229BQ8NBD8 167 aa0.07□□□□□ -2.4
CCDC38-204ENST00000546816 MORN4Q8NDC4 146 aa0.07□□□□□ -2.4
CCDC38-204ENST00000546816 LINC00208Q96KT6 92 aa0.07□□□□□ -2.4
CCDC38-204ENST00000546816 AP1S3Q96PC3 154 aa0.07□□□□□ -2.4
CCDC38-204ENST00000546816 MRPL35Q9NZE8 188 aaKnown RBP0.07□□□□□ -2.4
CCDC38-204ENST00000546816 MPC1Q9Y5U8 109 aa0.07□□□□□ -2.4
CCDC38-204ENST00000546816 USP54Q70EL1 1684 aa0.07□□□□□ -2.4
CCDC38-204ENST00000546816 DLC1Q96QB1 1528 aa0.07□□□□□ -2.4
CCDC38-204ENST00000546816 FAM135BQ49AJ0 1406 aa0.06□□□□□ -2.4
CCDC38-204ENST00000546816 FGD6Q6ZV73 1430 aa0.06□□□□□ -2.4
CCDC38-204ENST00000546816 TRBV7-6A0A0J9YX20 115 aa0.06□□□□□ -2.4
CCDC38-204ENST00000546816 A0A1W2PPB8 328 aa0.06□□□□□ -2.4
CCDC38-204ENST00000546816 A0A1W2PRS3 328 aa0.06□□□□□ -2.4
Retrieved 100 of 20,778 RNA–protein pairs in 55.7 ms