RNA–Protein interactions for RNA: ENST00000546433.5

SSH1-203, Transcript of slingshot protein phosphatase 1, humanhuman

TSL 5

Gene SSH1, Length 5,621 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH1-203ENST00000546433 SDK2Q58EX2 2172 aa8.3□□□□□ -1.08
SSH1-203ENST00000546433 C10orf91Q5T1B1 145 aa8.3□□□□□ -1.08
SSH1-203ENST00000546433 LINC00479Q96M42 142 aa8.3□□□□□ -1.08
SSH1-203ENST00000546433 ANAPC1Q9H1A4 1944 aa8.3□□□□□ -1.08
SSH1-203ENST00000546433 SMIM27A0A1W2PRY6 76 aa8.3□□□□□ -1.08
SSH1-203ENST00000546433 I3L3M4 83 aa8.3□□□□□ -1.08
SSH1-203ENST00000546433 ESPL1Q14674 2120 aa8.3□□□□□ -1.08
SSH1-203ENST00000546433 RUSC1-AS1Q66K80 236 aa8.3□□□□□ -1.08
SSH1-203ENST00000546433 ZFAND6Q6FIF0 208 aa8.3□□□□□ -1.08
SSH1-203ENST00000546433 PRIMA1Q86XR5 153 aa8.3□□□□□ -1.08
SSH1-203ENST00000546433 BDP1A6H8Y1 2624 aa8.29□□□□□ -1.08
SSH1-203ENST00000546433 MDC1Q14676 2089 aaKnown RBP8.29□□□□□ -1.08
SSH1-203ENST00000546433 PRB4P10163 310 aaPredicted RBP8.29□□□□□ -1.08
SSH1-203ENST00000546433 UBE2V1Q13404 147 aa8.29□□□□□ -1.08
SSH1-203ENST00000546433 C11orf52Q96A22 123 aa8.29□□□□□ -1.08
SSH1-203ENST00000546433 UBE2E2Q96LR5 201 aa8.29□□□□□ -1.08
SSH1-203ENST00000546433 RTTNQ86VV8 2226 aa8.29□□□□□ -1.08
SSH1-203ENST00000546433 IGHV4-30-2A0A087WSY4 118 aa8.29□□□□□ -1.08
SSH1-203ENST00000546433 EREGO14944 169 aa8.29□□□□□ -1.08
SSH1-203ENST00000546433 SSBP2P81877 361 aaPredicted RBP8.29□□□□□ -1.08
SSH1-203ENST00000546433 ZNF664Q8N3J9 261 aa8.29□□□□□ -1.08
SSH1-203ENST00000546433 IGHV2-5P01817 119 aa8.29□□□□□ -1.08
SSH1-203ENST00000546433 ZNF124Q15973 351 aa8.29□□□□□ -1.08
SSH1-203ENST00000546433 KIF26AQ9ULI4 1882 aaPredicted RBP8.29□□□□□ -1.08
SSH1-203ENST00000546433 C9orf66Q5T8R8 295 aa8.29□□□□□ -1.08
SSH1-203ENST00000546433 C8orf86Q6ZUL3 223 aa8.29□□□□□ -1.08
SSH1-203ENST00000546433 VPREB3Q9UKI3 123 aa8.29□□□□□ -1.08
SSH1-203ENST00000546433 IGHV1OR15-1A0A075B7D0 117 aa8.28□□□□□ -1.08
SSH1-203ENST00000546433 C8orf49Q96NF6 230 aa8.28□□□□□ -1.08
SSH1-203ENST00000546433 F8WEM9 126 aa8.28□□□□□ -1.08
SSH1-203ENST00000546433 PRR25Q96S07 402 aa8.28□□□□□ -1.08
SSH1-203ENST00000546433 LAMTOR3Q9UHA4 124 aa8.28□□□□□ -1.08
SSH1-203ENST00000546433 SNRNP200O75643 2136 aaKnown RBP8.28□□□□□ -1.08
SSH1-203ENST00000546433 C9JQL5 133 aa8.28□□□□□ -1.08
SSH1-203ENST00000546433 NPC2P61916 151 aa8.28□□□□□ -1.08
SSH1-203ENST00000546433 PMVKQ15126 192 aa8.28□□□□□ -1.08
SSH1-203ENST00000546433 ZNF726P1Q15940 193 aa8.28□□□□□ -1.08
SSH1-203ENST00000546433 C1orf122Q6ZSJ8 110 aa8.28□□□□□ -1.08
SSH1-203ENST00000546433 Q8NFD4 153 aa8.28□□□□□ -1.08
SSH1-203ENST00000546433 ZNRD1Q9P1U0 126 aa8.28□□□□□ -1.08
SSH1-203ENST00000546433 TP53TG1Q9Y2A0 90 aa8.28□□□□□ -1.08
SSH1-203ENST00000546433 SELENOKQ9Y6D0 94 aa8.28□□□□□ -1.08
SSH1-203ENST00000546433 V9GYV3 84 aa8.28□□□□□ -1.08
SSH1-203ENST00000546433 TRAV13-1A0A0B4J241 112 aa8.28□□□□□ -1.08
SSH1-203ENST00000546433 TMEM213A2RRL7 107 aa8.28□□□□□ -1.08
SSH1-203ENST00000546433 APOC4P55056 127 aa8.28□□□□□ -1.08
SSH1-203ENST00000546433 KLF12Q9Y4X4 402 aa8.28□□□□□ -1.08
SSH1-203ENST00000546433 A8MWP6 167 aa8.28□□□□□ -1.08
SSH1-203ENST00000546433 C2orf66Q6UXQ4 117 aa8.28□□□□□ -1.08
SSH1-203ENST00000546433 RSPO1Q2MKA7 263 aaPredicted RBP8.27□□□□□ -1.09
SSH1-203ENST00000546433 TRBV25-1A0A075B6N4 114 aa8.27□□□□□ -1.09
SSH1-203ENST00000546433 ZNF503-AS2A6NEH8 195 aa8.27□□□□□ -1.09
SSH1-203ENST00000546433 MBD6Q96DN6 1003 aa8.27□□□□□ -1.09
SSH1-203ENST00000546433 SPXQ9BT56 116 aa8.27□□□□□ -1.09
SSH1-203ENST00000546433 WT1-ASQ06250 92 aa8.27□□□□□ -1.09
SSH1-203ENST00000546433 MYLKQ15746 1914 aa8.27□□□□□ -1.09
SSH1-203ENST00000546433 LRRK1Q38SD2 2015 aa8.27□□□□□ -1.09
SSH1-203ENST00000546433 CDKN1BP46527 198 aa8.26□□□□□ -1.09
SSH1-203ENST00000546433 OR11H6Q8NGC7 330 aa8.26□□□□□ -1.09
SSH1-203ENST00000546433 SPAG8Q99932 426 aaPredicted RBP8.26□□□□□ -1.09
SSH1-203ENST00000546433 POLR3KQ9Y2Y1 108 aaPredicted RBP8.26□□□□□ -1.09
SSH1-203ENST00000546433 GPR179Q6PRD1 2367 aa8.26□□□□□ -1.09
SSH1-203ENST00000546433 LY6G6DO95868 133 aa8.26□□□□□ -1.09
SSH1-203ENST00000546433 LGALS9BQ3B8N2 356 aa8.26□□□□□ -1.09
SSH1-203ENST00000546433 PRR31Q5SQ13 230 aa8.26□□□□□ -1.09
SSH1-203ENST00000546433 LGALS9CQ6DKI2 356 aa8.26□□□□□ -1.09
SSH1-203ENST00000546433 ELANEP08246 267 aa8.26□□□□□ -1.09
SSH1-203ENST00000546433 MRPL51Q4U2R6 128 aaKnown RBP8.26□□□□□ -1.09
SSH1-203ENST00000546433 PYGO2Q9BRQ0 406 aa8.26□□□□□ -1.09
SSH1-203ENST00000546433 TP53BP1Q12888 1972 aaPredicted RBP8.26□□□□□ -1.09
SSH1-203ENST00000546433 MMP23AO75900 390 aa8.26□□□□□ -1.09
SSH1-203ENST00000546433 MRPL53Q96EL3 112 aaKnown RBP8.26□□□□□ -1.09
SSH1-203ENST00000546433 CYYR1Q96J86 154 aa8.26□□□□□ -1.09
SSH1-203ENST00000546433 CACNA1DQ01668 2161 aa8.25□□□□□ -1.09
SSH1-203ENST00000546433 TRBV20-1A0A075B6N2 111 aa8.25□□□□□ -1.09
SSH1-203ENST00000546433 CLPSL1A2RUU4 121 aa8.25□□□□□ -1.09
SSH1-203ENST00000546433 INAFM1C9JVW0 142 aa8.25□□□□□ -1.09
SSH1-203ENST00000546433 PSCAO43653 123 aa8.25□□□□□ -1.09
SSH1-203ENST00000546433 CDK2AP2O75956 126 aa8.25□□□□□ -1.09
SSH1-203ENST00000546433 IGLC1P0CG04 106 aa8.25□□□□□ -1.09
SSH1-203ENST00000546433 RSPO3Q9BXY4 272 aaPredicted RBP8.25□□□□□ -1.09
SSH1-203ENST00000546433 COX11Q9Y6N1 276 aa8.25□□□□□ -1.09
SSH1-203ENST00000546433 G3V318 75 aa8.25□□□□□ -1.09
SSH1-203ENST00000546433 NRGNQ92686 78 aa8.25□□□□□ -1.09
SSH1-203ENST00000546433 SPANXA1Q9NS26 97 aa8.25□□□□□ -1.09
SSH1-203ENST00000546433 DENND4AQ7Z401 1863 aa8.25□□□□□ -1.09
SSH1-203ENST00000546433 SPINK13Q1W4C9 94 aa8.25□□□□□ -1.09
SSH1-203ENST00000546433 NBASA2RRP1 2371 aa8.25□□□□□ -1.09
SSH1-203ENST00000546433 VWC2LB2RUY7 222 aa8.25□□□□□ -1.09
SSH1-203ENST00000546433 DEFB130BP0DP73 79 aa8.25□□□□□ -1.09
SSH1-203ENST00000546433 DEFB130AP0DP74 79 aa8.25□□□□□ -1.09
SSH1-203ENST00000546433 FXYD5Q96DB9 178 aa8.25□□□□□ -1.09
SSH1-203ENST00000546433 PRR20EP86478 221 aa8.24□□□□□ -1.09
SSH1-203ENST00000546433 PRR20CP86479 221 aa8.24□□□□□ -1.09
SSH1-203ENST00000546433 PRR20DP86480 221 aa8.24□□□□□ -1.09
SSH1-203ENST00000546433 PRR20BP86481 221 aa8.24□□□□□ -1.09
SSH1-203ENST00000546433 PRR20AP86496 221 aa8.24□□□□□ -1.09
SSH1-203ENST00000546433 DUX4L9Q6RFH8 374 aaPredicted RBP8.24□□□□□ -1.09
SSH1-203ENST00000546433 BOD1L2Q8IYS8 172 aa8.24□□□□□ -1.09
SSH1-203ENST00000546433 ZNF524Q96C55 264 aa8.24□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms