RNA–Protein interactions for RNA: ENST00000541615.5

SNHG1-218, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 5 BASIC

Gene SNHG1, Length 748 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-218ENST00000541615 GTF3C1Q12789 2109 aa4.04□□□□□ -1.76
SNHG1-218ENST00000541615 LTBP1Q14766 1721 aa4.04□□□□□ -1.76
SNHG1-218ENST00000541615 POLR2AP24928 1970 aaKnown RBP4.04□□□□□ -1.76
SNHG1-218ENST00000541615 TRGV8A0A0C4DH27 118 aa4.04□□□□□ -1.76
SNHG1-218ENST00000541615 F8VRH5 84 aa4.04□□□□□ -1.76
SNHG1-218ENST00000541615 IGKV1-39P01597 117 aa4.04□□□□□ -1.76
SNHG1-218ENST00000541615 IGKV1D-39P04432 117 aa4.04□□□□□ -1.76
SNHG1-218ENST00000541615 MAGEA5P43359 124 aa4.04□□□□□ -1.76
SNHG1-218ENST00000541615 ZNF138P52744 262 aa4.04□□□□□ -1.76
SNHG1-218ENST00000541615 ATP5EP2Q5VTU8 51 aa4.04□□□□□ -1.76
SNHG1-218ENST00000541615 MIC13Q5XKP0 118 aa4.04□□□□□ -1.76
SNHG1-218ENST00000541615 CXorf67Q86X51 503 aaPredicted RBP4.04□□□□□ -1.76
SNHG1-218ENST00000541615 NUP37Q8NFH4 326 aa4.04□□□□□ -1.76
SNHG1-218ENST00000541615 CCDC140Q96MF4 163 aa4.04□□□□□ -1.76
SNHG1-218ENST00000541615 FOXC2Q99958 501 aa4.04□□□□□ -1.76
SNHG1-218ENST00000541615 FOXQ1Q9C009 403 aa4.04□□□□□ -1.76
SNHG1-218ENST00000541615 DEPPQ9NTK1 212 aa4.04□□□□□ -1.76
SNHG1-218ENST00000541615 SCN3AQ9NY46 2000 aa4.04□□□□□ -1.76
SNHG1-218ENST00000541615 PCNTO95613 3336 aa4.03□□□□□ -1.76
SNHG1-218ENST00000541615 MGAMO43451 1857 aa4.03□□□□□ -1.76
SNHG1-218ENST00000541615 TRAV3A0A0B4J244 114 aa4.03□□□□□ -1.76
SNHG1-218ENST00000541615 IGKV1D-13A0A0B4J2D9 117 aa4.03□□□□□ -1.76
SNHG1-218ENST00000541615 RBMY1BA6NDE4 496 aaKnown RBP4.03□□□□□ -1.76
SNHG1-218ENST00000541615 RBMY1EA6NEQ0 496 aaKnown RBP4.03□□□□□ -1.76
SNHG1-218ENST00000541615 NDUFS5O43920 106 aa4.03□□□□□ -1.76
SNHG1-218ENST00000541615 EIF4EBP3O60516 100 aaPredicted RBP4.03□□□□□ -1.76
SNHG1-218ENST00000541615 IGHV3-33P01772 117 aa4.03□□□□□ -1.76
SNHG1-218ENST00000541615 RBMY1DP0C7P1 496 aaKnown RBP4.03□□□□□ -1.76
SNHG1-218ENST00000541615 RBMY1A1P0DJD3 496 aaKnown RBP4.03□□□□□ -1.76
SNHG1-218ENST00000541615 RBMY1CP0DJD4 496 aa4.03□□□□□ -1.76
SNHG1-218ENST00000541615 IGKV1-13P0DP09 117 aa4.03□□□□□ -1.76
SNHG1-218ENST00000541615 CKS2P33552 79 aa4.03□□□□□ -1.76
SNHG1-218ENST00000541615 MYCNOSP40205 109 aa4.03□□□□□ -1.76
SNHG1-218ENST00000541615 ZNF137PP52743 207 aa4.03□□□□□ -1.76
SNHG1-218ENST00000541615 RBMY1FQ15415 496 aaKnown RBP4.03□□□□□ -1.76
SNHG1-218ENST00000541615 CDSNQ15517 529 aa4.03□□□□□ -1.76
SNHG1-218ENST00000541615 BEAN1Q3B7T3 259 aa4.03□□□□□ -1.76
SNHG1-218ENST00000541615 ORMDL2Q53FV1 153 aa4.03□□□□□ -1.76
SNHG1-218ENST00000541615 Q6JHZ5 121 aa4.03□□□□□ -1.76
SNHG1-218ENST00000541615 CEMP1Q6PRD7 247 aaPredicted RBP4.03□□□□□ -1.76
SNHG1-218ENST00000541615 FOXL2NBQ6ZUU3 175 aa4.03□□□□□ -1.76
SNHG1-218ENST00000541615 ZNF329Q86UD4 541 aa4.03□□□□□ -1.76
SNHG1-218ENST00000541615 MAPKAPK5-AS1Q8N8E1 139 aa4.03□□□□□ -1.76
SNHG1-218ENST00000541615 ARID1AO14497 2285 aa4.03□□□□□ -1.76
SNHG1-218ENST00000541615 HCFC1P51610 2035 aa4.02□□□□□ -1.77
SNHG1-218ENST00000541615 TRBV7-1A0A0A6YYK4 115 aa4.02□□□□□ -1.77
SNHG1-218ENST00000541615 TRAV40A0A0B4J280 105 aa4.02□□□□□ -1.77
SNHG1-218ENST00000541615 A0A1W2PQD3 144 aa4.02□□□□□ -1.77
SNHG1-218ENST00000541615 TMEM202A6NGA9 273 aa4.02□□□□□ -1.77
SNHG1-218ENST00000541615 ZNF815PA8K554 130 aa4.02□□□□□ -1.77
SNHG1-218ENST00000541615 PRSS46E5RG02 174 aa4.02□□□□□ -1.77
SNHG1-218ENST00000541615 COX7A2P2O60397 106 aa4.02□□□□□ -1.77
SNHG1-218ENST00000541615 HOXD3P31249 432 aaPredicted RBP4.02□□□□□ -1.77
SNHG1-218ENST00000541615 SUB1P53999 127 aaKnown RBP eCLIP4.02□□□□□ -1.77
SNHG1-218ENST00000541615 DAZ2Q13117 558 aaKnown RBP4.02□□□□□ -1.77
SNHG1-218ENST00000541615 ERCC8Q13216 396 aa4.02□□□□□ -1.77
SNHG1-218ENST00000541615 CRIP3Q6Q6R5 217 aa4.02□□□□□ -1.77
SNHG1-218ENST00000541615 DAZ4Q86SG3 579 aaKnown RBP4.02□□□□□ -1.77
SNHG1-218ENST00000541615 MKXQ8IYA7 352 aa4.02□□□□□ -1.77
SNHG1-218ENST00000541615 SLC25A29Q8N8R3 303 aa4.02□□□□□ -1.77
SNHG1-218ENST00000541615 NFAM1Q8NET5 270 aaPredicted RBP4.02□□□□□ -1.77
SNHG1-218ENST00000541615 WFDC11Q8NEX6 87 aa4.02□□□□□ -1.77
SNHG1-218ENST00000541615 DAZ3Q9NR90 486 aaKnown RBP4.02□□□□□ -1.77
SNHG1-218ENST00000541615 Q9UF83 564 aa4.02□□□□□ -1.77
SNHG1-218ENST00000541615 NCOA6Q14686 2063 aaPredicted RBP4.02□□□□□ -1.77
SNHG1-218ENST00000541615 COL4A3Q01955 1670 aa4.01□□□□□ -1.77
SNHG1-218ENST00000541615 DOCK3Q8IZD9 2030 aa4.01□□□□□ -1.77
SNHG1-218ENST00000541615 TRAV41A0A0B4J266 112 aa4.01□□□□□ -1.77
SNHG1-218ENST00000541615 TRBV10-3A0A0K0K1G6 114 aa4.01□□□□□ -1.77
SNHG1-218ENST00000541615 LOC101059948A0A1B0GTJ6 334 aa4.01□□□□□ -1.77
SNHG1-218ENST00000541615 D6R8Y8 96 aa4.01□□□□□ -1.77
SNHG1-218ENST00000541615 H7C423 109 aa4.01□□□□□ -1.77
SNHG1-218ENST00000541615 SS18L1O75177 396 aaPredicted RBP4.01□□□□□ -1.77
SNHG1-218ENST00000541615 IGHV3-30P01768 117 aa4.01□□□□□ -1.77
SNHG1-218ENST00000541615 IGF1P05019 195 aa4.01□□□□□ -1.77
SNHG1-218ENST00000541615 IGHV3-30-5P0DP03 117 aa4.01□□□□□ -1.77
SNHG1-218ENST00000541615 FKBP1BP68106 108 aa4.01□□□□□ -1.77
SNHG1-218ENST00000541615 Q1RN00 199 aa4.01□□□□□ -1.77
SNHG1-218ENST00000541615 FAM222AQ5U5X8 452 aa4.01□□□□□ -1.77
SNHG1-218ENST00000541615 MIR17HGQ75NE6 70 aa4.01□□□□□ -1.77
SNHG1-218ENST00000541615 LINC00482Q8N8I6 264 aa4.01□□□□□ -1.77
SNHG1-218ENST00000541615 KLHDC9Q8NEP7 349 aa4.01□□□□□ -1.77
SNHG1-218ENST00000541615 MRPL53Q96EL3 112 aaKnown RBP4.01□□□□□ -1.77
SNHG1-218ENST00000541615 ZNF714Q96N38 554 aa4.01□□□□□ -1.77
SNHG1-218ENST00000541615 GPHA2Q96T91 129 aa4.01□□□□□ -1.77
SNHG1-218ENST00000541615 SLC50A1Q9BRV3 221 aa4.01□□□□□ -1.77
SNHG1-218ENST00000541615 FSCN3Q9NQT6 498 aa4.01□□□□□ -1.77
SNHG1-218ENST00000541615 U3KQE9 123 aa4.01□□□□□ -1.77
SNHG1-218ENST00000541615 EXPH5Q8NEV8 1989 aa4.01□□□□□ -1.77
SNHG1-218ENST00000541615 FANCMQ8IYD8 2048 aa4□□□□□ -1.77
SNHG1-218ENST00000541615 BPTFQ12830 3046 aa4□□□□□ -1.77
SNHG1-218ENST00000541615 LOC389332A0A1B0GUA5 103 aa4□□□□□ -1.77
SNHG1-218ENST00000541615 UBE2L6O14933 153 aa4□□□□□ -1.77
SNHG1-218ENST00000541615 ZNF883P0CG24 379 aa4□□□□□ -1.77
SNHG1-218ENST00000541615 RNASE2P10153 161 aaKnown RBP4□□□□□ -1.77
SNHG1-218ENST00000541615 EIF4EBP1Q13541 118 aaPredicted RBP4□□□□□ -1.77
SNHG1-218ENST00000541615 LAGE3Q14657 143 aa4□□□□□ -1.77
SNHG1-218ENST00000541615 PLGLAQ15195 96 aa4□□□□□ -1.77
SNHG1-218ENST00000541615 IGFL2Q6UWQ7 119 aa4□□□□□ -1.77
SNHG1-218ENST00000541615 PLXDC1Q8IUK5 500 aa4□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms