RNA–Protein interactions for RNA: ENST00000541342.2

SPIDR-227, Transcript of scaffold protein involved in DNA repair, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SPIDR, Length 3,311 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-227ENST00000541342 HSBP1L1C9JCN9 74 aa13.33□□□□□ -0.28
SPIDR-227ENST00000541342 RIGQ13278 110 aa13.33□□□□□ -0.28
SPIDR-227ENST00000541342 VAMP3Q15836 100 aa13.33□□□□□ -0.28
SPIDR-227ENST00000541342 TTC9CQ8N5M4 171 aa13.33□□□□□ -0.28
SPIDR-227ENST00000541342 RNF125Q96EQ8 232 aa13.33□□□□□ -0.28
SPIDR-227ENST00000541342 MS4A6AQ9H2W1 248 aa13.33□□□□□ -0.28
SPIDR-227ENST00000541342 TRAV30A0A087WSZ9 112 aa13.33□□□□□ -0.28
SPIDR-227ENST00000541342 IGHV4-38-2P0DP08 117 aa13.33□□□□□ -0.28
SPIDR-227ENST00000541342 OR4C5Q8NGB2 326 aa13.33□□□□□ -0.28
SPIDR-227ENST00000541342 TENM4Q6N022 2769 aa13.32□□□□□ -0.28
SPIDR-227ENST00000541342 IGLV11-55A0A075B6I3 123 aa13.32□□□□□ -0.28
SPIDR-227ENST00000541342 IL4P05112 153 aa13.32□□□□□ -0.28
SPIDR-227ENST00000541342 MSMBP08118 114 aa13.32□□□□□ -0.28
SPIDR-227ENST00000541342 IFI27P40305 119 aaPredicted RBP13.32□□□□□ -0.28
SPIDR-227ENST00000541342 KRTAP10-9P60411 292 aa13.32□□□□□ -0.28
SPIDR-227ENST00000541342 TPPP3Q9BW30 176 aa13.32□□□□□ -0.28
SPIDR-227ENST00000541342 ZNF493Q6ZR52 646 aa13.32□□□□□ -0.28
SPIDR-227ENST00000541342 CHD6Q8TD26 2715 aa13.32□□□□□ -0.28
SPIDR-227ENST00000541342 LYPD1Q8N2G4 141 aa13.31□□□□□ -0.28
SPIDR-227ENST00000541342 USP9YO00507 2555 aaPredicted RBP13.31□□□□□ -0.28
SPIDR-227ENST00000541342 WI2-2373I1.2A0A1W2PRP0 233 aa13.31□□□□□ -0.28
SPIDR-227ENST00000541342 TMEM213A2RRL7 107 aa13.31□□□□□ -0.28
SPIDR-227ENST00000541342 COX8AP10176 69 aa13.31□□□□□ -0.28
SPIDR-227ENST00000541342 DSCR9P59020 149 aa13.31□□□□□ -0.28
SPIDR-227ENST00000541342 C12orf54Q6X4T0 127 aa13.31□□□□□ -0.28
SPIDR-227ENST00000541342 PIFOQ8TCI5 191 aa13.31□□□□□ -0.28
SPIDR-227ENST00000541342 SNAI2O43623 268 aa13.3□□□□□ -0.28
SPIDR-227ENST00000541342 FCGR2BP31994 310 aaPredicted RBP13.3□□□□□ -0.28
SPIDR-227ENST00000541342 HIST1H1AQ02539 215 aaPredicted RBP13.3□□□□□ -0.28
SPIDR-227ENST00000541342 D6R8Y8 96 aa13.3□□□□□ -0.28
SPIDR-227ENST00000541342 FGF6P10767 208 aa13.3□□□□□ -0.28
SPIDR-227ENST00000541342 KMT2BQ9UMN6 2715 aaPredicted RBP13.3□□□□□ -0.28
SPIDR-227ENST00000541342 A0A096LNT2 108 aa13.29□□□□□ -0.28
SPIDR-227ENST00000541342 F8W735 103 aaPredicted RBP13.29□□□□□ -0.28
SPIDR-227ENST00000541342 SIGLEC8Q9NYZ4 499 aa13.29□□□□□ -0.28
SPIDR-227ENST00000541342 U3KQK5 164 aa13.29□□□□□ -0.28
SPIDR-227ENST00000541342 A0A1B0GW15 77 aa13.29□□□□□ -0.28
SPIDR-227ENST00000541342 CDKN1BP46527 198 aa13.29□□□□□ -0.28
SPIDR-227ENST00000541342 LYZL1Q6UWQ5 148 aa13.29□□□□□ -0.28
SPIDR-227ENST00000541342 TMEM219Q86XT9 240 aa13.29□□□□□ -0.28
SPIDR-227ENST00000541342 OR10AG1Q8NH19 301 aa13.29□□□□□ -0.28
SPIDR-227ENST00000541342 PRSS3P2Q8NHM4 247 aa13.29□□□□□ -0.28
SPIDR-227ENST00000541342 ZANQ9Y493 2812 aa13.29□□□□□ -0.28
SPIDR-227ENST00000541342 CBY3A6NI87 242 aa13.29□□□□□ -0.28
SPIDR-227ENST00000541342 LINC01548A6NM66 108 aa13.29□□□□□ -0.28
SPIDR-227ENST00000541342 AVPP01185 164 aa13.29□□□□□ -0.28
SPIDR-227ENST00000541342 FA2HQ7L5A8 372 aa13.29□□□□□ -0.28
SPIDR-227ENST00000541342 ZNF575Q86XF7 245 aa13.29□□□□□ -0.28
SPIDR-227ENST00000541342 HIF1ANQ9NWT6 349 aa13.29□□□□□ -0.28
SPIDR-227ENST00000541342 RNF24Q9Y225 148 aa13.29□□□□□ -0.28
SPIDR-227ENST00000541342 GPR183P32249 361 aa13.28□□□□□ -0.28
SPIDR-227ENST00000541342 AMN1Q8IY45 258 aa13.28□□□□□ -0.28
SPIDR-227ENST00000541342 PTPN13Q12923 2485 aa13.28□□□□□ -0.28
SPIDR-227ENST00000541342 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP13.28□□□□□ -0.289e-7■■■■■ 29.4
SPIDR-227ENST00000541342 TMSB15BA0A087X1C1 80 aa13.28□□□□□ -0.28
SPIDR-227ENST00000541342 K7EQM0 130 aa13.28□□□□□ -0.28
SPIDR-227ENST00000541342 ATP6V0E1O15342 81 aa13.28□□□□□ -0.28
SPIDR-227ENST00000541342 ANKRD39Q53RE8 183 aa13.28□□□□□ -0.28
SPIDR-227ENST00000541342 Q6AWC8 147 aa13.28□□□□□ -0.28
SPIDR-227ENST00000541342 AMMECR1LQ6DCA0 310 aa13.28□□□□□ -0.28
SPIDR-227ENST00000541342 C5orf56Q8N8D9 126 aa13.28□□□□□ -0.28
SPIDR-227ENST00000541342 LOC389332A0A1B0GUA5 103 aa13.28□□□□□ -0.28
SPIDR-227ENST00000541342 B4DSR2 109 aa13.28□□□□□ -0.28
SPIDR-227ENST00000541342 TRAV8-6A0A0B4J262 113 aa13.27□□□□□ -0.28
SPIDR-227ENST00000541342 SLC25A16P16260 332 aa13.27□□□□□ -0.28
SPIDR-227ENST00000541342 CSN1S1P47710 185 aa13.27□□□□□ -0.28
SPIDR-227ENST00000541342 FXYD7P58549 80 aa13.27□□□□□ -0.28
SPIDR-227ENST00000541342 PSG9Q00887 426 aa13.27□□□□□ -0.28
SPIDR-227ENST00000541342 TMEM190Q8WZ59 177 aa13.27□□□□□ -0.28
SPIDR-227ENST00000541342 MEGF9Q9H1U4 602 aa13.27□□□□□ -0.28
SPIDR-227ENST00000541342 ABCA12Q86UK0 2595 aa13.27□□□□□ -0.29
SPIDR-227ENST00000541342 CD5LO43866 347 aa13.27□□□□□ -0.29
SPIDR-227ENST00000541342 SH2D1AO60880 128 aa13.27□□□□□ -0.29
SPIDR-227ENST00000541342 FAM104BQ5XKR9 115 aa13.26□□□□□ -0.29
SPIDR-227ENST00000541342 OR8A1Q8NGG7 326 aa13.26□□□□□ -0.29
SPIDR-227ENST00000541342 PSMG3-AS1Q96PY0 264 aa13.26□□□□□ -0.29
SPIDR-227ENST00000541342 ZNF469Q96JG9 3925 aaPredicted RBP13.26□□□□□ -0.29
SPIDR-227ENST00000541342 IGKV2-40A0A087WW87 121 aaPredicted RBP13.26□□□□□ -0.29
SPIDR-227ENST00000541342 IGKV2D-40P01614 121 aaPredicted RBP13.26□□□□□ -0.29
SPIDR-227ENST00000541342 IGHV3-23P01764 117 aa13.26□□□□□ -0.29
SPIDR-227ENST00000541342 ECSCRQ19T08 205 aa13.26□□□□□ -0.29
SPIDR-227ENST00000541342 SERTM2A0A1B0GWG4 89 aa13.25□□□□□ -0.29
SPIDR-227ENST00000541342 PDE6HQ13956 83 aa13.25□□□□□ -0.29
SPIDR-227ENST00000541342 MAPK1IP1LQ8NDC0 245 aa13.25□□□□□ -0.29
SPIDR-227ENST00000541342 APCP25054 2843 aa13.25□□□□□ -0.29
SPIDR-227ENST00000541342 MRPL51Q4U2R6 128 aaKnown RBP13.24□□□□□ -0.29
SPIDR-227ENST00000541342 PRELID3AQ96N28 172 aa13.24□□□□□ -0.29
SPIDR-227ENST00000541342 G3V318 75 aa13.24□□□□□ -0.29
SPIDR-227ENST00000541342 CT45A10P0DMU9 189 aa13.24□□□□□ -0.29
SPIDR-227ENST00000541342 ZNF80P51504 273 aaPredicted RBP13.24□□□□□ -0.29
SPIDR-227ENST00000541342 MFAP4P55083 255 aa13.24□□□□□ -0.29
SPIDR-227ENST00000541342 FAM110DQ8TAY7 271 aaPredicted RBP13.24□□□□□ -0.29
SPIDR-227ENST00000541342 ZNF48Q96MX3 618 aaPredicted RBP13.24□□□□□ -0.29
SPIDR-227ENST00000541342 TMEM189A5PLL7 270 aa13.24□□□□□ -0.29
SPIDR-227ENST00000541342 GNG7O60262 68 aa13.24□□□□□ -0.29
SPIDR-227ENST00000541342 IGHG4P01861 327 aa13.24□□□□□ -0.29
SPIDR-227ENST00000541342 COX8CQ7Z4L0 72 aa13.24□□□□□ -0.29
SPIDR-227ENST00000541342 CST9LQ9H4G1 147 aa13.24□□□□□ -0.29
SPIDR-227ENST00000541342 C21orf62Q9NYP8 219 aa13.24□□□□□ -0.29
SPIDR-227ENST00000541342 MOB4Q9Y3A3 225 aa13.24□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 68.9 ms