RNA–Protein interactions for RNA: ENST00000540846.6

SMAD3-204, Transcript of SMAD family member 3, humanhuman

TSL 1 (best) BASIC

Gene SMAD3, Length 1,567 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-204ENST00000540846 GBGT1Q8N5D6 347 aa9.47□□□□□ -0.89
SMAD3-204ENST00000540846 KLHL30-AS1Q8NEE0 82 aa9.47□□□□□ -0.89
SMAD3-204ENST00000540846 MRPL53Q96EL3 112 aaKnown RBP9.47□□□□□ -0.89
SMAD3-204ENST00000540846 RPP21Q9H633 154 aaKnown RBP9.47□□□□□ -0.89
SMAD3-204ENST00000540846 DAZ1Q9NQZ3 744 aaKnown RBP9.47□□□□□ -0.89
SMAD3-204ENST00000540846 TRAV8-2A0A0B4J237 113 aa9.46□□□□□ -0.89
SMAD3-204ENST00000540846 K7EMT4 169 aa9.46□□□□□ -0.89
SMAD3-204ENST00000540846 CA1P00915 261 aaPredicted RBP9.46□□□□□ -0.89
SMAD3-204ENST00000540846 HLA-DMBP28068 263 aa9.46□□□□□ -0.89
SMAD3-204ENST00000540846 TCL1AP56279 114 aa9.46□□□□□ -0.89
SMAD3-204ENST00000540846 RPL19P84098 196 aaKnown RBP9.46□□□□□ -0.89
SMAD3-204ENST00000540846 FHL3Q13643 280 aa9.46□□□□□ -0.89
SMAD3-204ENST00000540846 KHDC1LQ5JSQ8 128 aa9.46□□□□□ -0.89
SMAD3-204ENST00000540846 LCN12Q6JVE5 192 aa9.46□□□□□ -0.89
SMAD3-204ENST00000540846 OR4B1Q8NGF8 309 aa9.46□□□□□ -0.89
SMAD3-204ENST00000540846 TSKUQ8WUA8 353 aa9.46□□□□□ -0.89
SMAD3-204ENST00000540846 ZC2HC1AQ96GY0 325 aa9.46□□□□□ -0.89
SMAD3-204ENST00000540846 CLEC5AQ9NY25 188 aa9.46□□□□□ -0.89
SMAD3-204ENST00000540846 IGHV7-4-1A0A0J9YVY3 117 aa9.46□□□□□ -0.9
SMAD3-204ENST00000540846 RBAKDNA6NC62 111 aa9.46□□□□□ -0.9
SMAD3-204ENST00000540846 IZUMO1RA6ND01 250 aa9.46□□□□□ -0.9
SMAD3-204ENST00000540846 P01737 135 aa9.46□□□□□ -0.9
SMAD3-204ENST00000540846 FAM106AQ4KMX7 169 aa9.46□□□□□ -0.9
SMAD3-204ENST00000540846 IGFL4Q6B9Z1 124 aa9.46□□□□□ -0.9
SMAD3-204ENST00000540846 NDUFA11Q86Y39 141 aa9.46□□□□□ -0.9
SMAD3-204ENST00000540846 RAX2Q96IS3 184 aa9.46□□□□□ -0.9
SMAD3-204ENST00000540846 A0A1W2PRX2 142 aa9.45□□□□□ -0.9
SMAD3-204ENST00000540846 ZNF705FA8MVS1 300 aaPredicted RBP9.45□□□□□ -0.9
SMAD3-204ENST00000540846 FABP9Q0Z7S8 132 aa9.45□□□□□ -0.9
SMAD3-204ENST00000540846 COX19Q49B96 90 aa9.45□□□□□ -0.9
SMAD3-204ENST00000540846 TMEM158Q8WZ71 300 aa9.45□□□□□ -0.9
SMAD3-204ENST00000540846 DAZAP1Q96EP5 407 aaKnown RBP9.45□□□□□ -0.9
SMAD3-204ENST00000540846 DUX3Q96PT4 197 aa9.45□□□□□ -0.9
SMAD3-204ENST00000540846 NAT8BQ9UHF3 227 aa9.45□□□□□ -0.9
SMAD3-204ENST00000540846 UFC1Q9Y3C8 167 aa9.45□□□□□ -0.9
SMAD3-204ENST00000540846 TRAPPC1Q9Y5R8 145 aa9.45□□□□□ -0.9
SMAD3-204ENST00000540846 WNK1Q9H4A3 2382 aa9.44□□□□□ -0.9
SMAD3-204ENST00000540846 A8MWL6 223 aa9.44□□□□□ -0.9
SMAD3-204ENST00000540846 SOCS3O14543 225 aa9.44□□□□□ -0.9
SMAD3-204ENST00000540846 PRB4P10163 310 aaPredicted RBP9.44□□□□□ -0.9
SMAD3-204ENST00000540846 CBLN1P23435 193 aa9.44□□□□□ -0.9
SMAD3-204ENST00000540846 RIPPLY3P57055 190 aa9.44□□□□□ -0.9
SMAD3-204ENST00000540846 TM4SF20Q53R12 229 aa9.44□□□□□ -0.9
SMAD3-204ENST00000540846 SAPCD1Q5SSQ6 148 aa9.44□□□□□ -0.9
SMAD3-204ENST00000540846 WDR73Q6P4I2 378 aa9.44□□□□□ -0.9
SMAD3-204ENST00000540846 REC114Q7Z4M0 266 aa9.44□□□□□ -0.9
SMAD3-204ENST00000540846 RNF182Q8N6D2 247 aa9.44□□□□□ -0.9
SMAD3-204ENST00000540846 PRR25Q96S07 402 aa9.44□□□□□ -0.9
SMAD3-204ENST00000540846 NEU1Q99519 415 aa9.44□□□□□ -0.9
SMAD3-204ENST00000540846 VGLL1Q99990 258 aa9.44□□□□□ -0.9
SMAD3-204ENST00000540846 RHPN1-AS1Q9BWJ2 59 aa9.44□□□□□ -0.9
SMAD3-204ENST00000540846 GNB1LQ9BYB4 327 aa9.44□□□□□ -0.9
SMAD3-204ENST00000540846 GFRA4Q9GZZ7 299 aa9.44□□□□□ -0.9
SMAD3-204ENST00000540846 SMPXQ9UHP9 88 aa9.44□□□□□ -0.9
SMAD3-204ENST00000540846 FAM231BA6NCW3 169 aa9.43□□□□□ -0.9
SMAD3-204ENST00000540846 A8MWP6 167 aa9.43□□□□□ -0.9
SMAD3-204ENST00000540846 MT-ND6P03923 174 aa9.43□□□□□ -0.9
SMAD3-204ENST00000540846 CT45A10P0DMU9 189 aa9.43□□□□□ -0.9
SMAD3-204ENST00000540846 HOXA5P20719 270 aa9.43□□□□□ -0.9
SMAD3-204ENST00000540846 HOXD3P31249 432 aaPredicted RBP9.43□□□□□ -0.9
SMAD3-204ENST00000540846 NDUFA6P56556 154 aa9.43□□□□□ -0.9
SMAD3-204ENST00000540846 RASL11AQ6T310 242 aa9.43□□□□□ -0.9
SMAD3-204ENST00000540846 NUP35Q8NFH5 326 aa9.43□□□□□ -0.9
SMAD3-204ENST00000540846 OR11H1Q8NG94 326 aa9.43□□□□□ -0.9
SMAD3-204ENST00000540846 C8orf49Q96NF6 230 aa9.43□□□□□ -0.9
SMAD3-204ENST00000540846 ZNF747Q9BV97 191 aa9.43□□□□□ -0.9
SMAD3-204ENST00000540846 TMEM213A2RRL7 107 aa9.42□□□□□ -0.9
SMAD3-204ENST00000540846 HIGD1CA8MV81 97 aa9.42□□□□□ -0.9
SMAD3-204ENST00000540846 PRAC2D3DTV9 90 aa9.42□□□□□ -0.9
SMAD3-204ENST00000540846 LINC01619G3V211 115 aa9.42□□□□□ -0.9
SMAD3-204ENST00000540846 FRMD6-AS1P0C7T7 363 aa9.42□□□□□ -0.9
SMAD3-204ENST00000540846 CRIP1P50238 77 aa9.42□□□□□ -0.9
SMAD3-204ENST00000540846 SLURP1P55000 103 aa9.42□□□□□ -0.9
SMAD3-204ENST00000540846 KLF5Q13887 457 aaPredicted RBP9.42□□□□□ -0.9
SMAD3-204ENST00000540846 COA6Q5JTJ3 125 aaKnown RBP9.42□□□□□ -0.9
SMAD3-204ENST00000540846 ATP5L2Q7Z4Y8 100 aa9.42□□□□□ -0.9
SMAD3-204ENST00000540846 OR1N2Q8NGR9 330 aa9.42□□□□□ -0.9
SMAD3-204ENST00000540846 Q8TAT8 98 aa9.42□□□□□ -0.9
SMAD3-204ENST00000540846 C16orf92Q96LL3 132 aa9.42□□□□□ -0.9
SMAD3-204ENST00000540846 ASCL2Q99929 193 aa9.42□□□□□ -0.9
SMAD3-204ENST00000540846 NRN1Q9NPD7 142 aa9.42□□□□□ -0.9
SMAD3-204ENST00000540846 CCL24O00175 119 aa9.41□□□□□ -0.9
SMAD3-204ENST00000540846 LGALS9O00182 355 aa9.41□□□□□ -0.9
SMAD3-204ENST00000540846 BMI1P35226 326 aa9.41□□□□□ -0.9
SMAD3-204ENST00000540846 NSUN5P1Q3KNT7 163 aa9.41□□□□□ -0.9
SMAD3-204ENST00000540846 TMEM136Q6ZRR5 245 aa9.41□□□□□ -0.9
SMAD3-204ENST00000540846 GTSF1Q8WW33 167 aa9.41□□□□□ -0.9
SMAD3-204ENST00000540846 NDFIP1Q9BT67 221 aa9.41□□□□□ -0.9
SMAD3-204ENST00000540846 MRPL18Q9H0U6 180 aaKnown RBP9.41□□□□□ -0.9
SMAD3-204ENST00000540846 A0A1B0GXF2 115 aa9.41□□□□□ -0.9
SMAD3-204ENST00000540846 SNURFLB1AK76 121 aa9.41□□□□□ -0.9
SMAD3-204ENST00000540846 SPINK4O60575 86 aa9.41□□□□□ -0.9
SMAD3-204ENST00000540846 HLA-DQA1P01909 254 aa9.41□□□□□ -0.9
SMAD3-204ENST00000540846 FAM162BQ5T6X4 162 aa9.41□□□□□ -0.9
SMAD3-204ENST00000540846 MRPL54Q6P161 138 aaKnown RBP9.41□□□□□ -0.9
SMAD3-204ENST00000540846 RBPMS2Q6ZRY4 209 aaKnown RBP9.41□□□□□ -0.9
SMAD3-204ENST00000540846 TCF24Q7RTU0 167 aa9.41□□□□□ -0.9
SMAD3-204ENST00000540846 OR2D3Q8NGH3 330 aa9.41□□□□□ -0.9
SMAD3-204ENST00000540846 MDFIQ99750 246 aa9.41□□□□□ -0.9
SMAD3-204ENST00000540846 GPR61Q9BZJ8 451 aa9.41□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms