RNA–Protein interactions for RNA: ENST00000540475.5

SEMA4D-223, Transcript of semaphorin 4D, humanhuman

TSL 3

Gene SEMA4D, Length 826 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4D-223ENST00000540475 WDR61Q9GZS3 305 aaKnown RBP9.14□□□□□ -0.95
SEMA4D-223ENST00000540475 AGPAT4-IT1Q9H0P7 198 aa9.14□□□□□ -0.95
SEMA4D-223ENST00000540475 MUC4Q99102 2169 aa9.13□□□□□ -0.95
SEMA4D-223ENST00000540475 SIX6O95475 246 aa9.13□□□□□ -0.95
SEMA4D-223ENST00000540475 CCL18P55774 89 aa9.13□□□□□ -0.95
SEMA4D-223ENST00000540475 C11orf72Q8NBR9 251 aa9.13□□□□□ -0.95
SEMA4D-223ENST00000540475 ATG101Q9BSB4 218 aa9.13□□□□□ -0.95
SEMA4D-223ENST00000540475 LINC00588Q9Y4M8 146 aa9.13□□□□□ -0.95
SEMA4D-223ENST00000540475 TIMM9Q9Y5J7 89 aa9.13□□□□□ -0.95
SEMA4D-223ENST00000540475 APOBP04114 4563 aaKnown RBP9.13□□□□□ -0.95
SEMA4D-223ENST00000540475 TRBV7-9A0A0J9YWB2 115 aa9.12□□□□□ -0.95
SEMA4D-223ENST00000540475 NBDYA0A0U1RRE5 68 aa9.12□□□□□ -0.95
SEMA4D-223ENST00000540475 C7orf71A4D174 169 aa9.12□□□□□ -0.95
SEMA4D-223ENST00000540475 INMT-MINDY4F8WBC2 141 aa9.12□□□□□ -0.95
SEMA4D-223ENST00000540475 NUDT3O95989 172 aa9.12□□□□□ -0.95
SEMA4D-223ENST00000540475 NBEAP1P0C6P0 100 aa9.12□□□□□ -0.95
SEMA4D-223ENST00000540475 HOXA5P20719 270 aa9.12□□□□□ -0.95
SEMA4D-223ENST00000540475 H2BFSP57053 126 aa9.12□□□□□ -0.95
SEMA4D-223ENST00000540475 ANXA2RQ3ZCQ2 193 aa9.12□□□□□ -0.95
SEMA4D-223ENST00000540475 MIR17HGQ75NE6 70 aa9.12□□□□□ -0.95
SEMA4D-223ENST00000540475 EXOC3-AS1Q8N2X6 119 aa9.12□□□□□ -0.95
SEMA4D-223ENST00000540475 RXFP4Q8TDU9 374 aa9.12□□□□□ -0.95
SEMA4D-223ENST00000540475 FXYD5Q96DB9 178 aa9.12□□□□□ -0.95
SEMA4D-223ENST00000540475 MRPL32Q9BYC8 188 aaKnown RBP9.12□□□□□ -0.95
SEMA4D-223ENST00000540475 PTTG2Q9NZH5 202 aa9.12□□□□□ -0.95
SEMA4D-223ENST00000540475 SNURFLB1AK76 121 aa9.11□□□□□ -0.95
SEMA4D-223ENST00000540475 M6PRP20645 277 aa9.11□□□□□ -0.95
SEMA4D-223ENST00000540475 CD300CQ08708 224 aa9.11□□□□□ -0.95
SEMA4D-223ENST00000540475 ERCC8Q13216 396 aa9.11□□□□□ -0.95
SEMA4D-223ENST00000540475 ZNF680Q8NEM1 530 aa9.11□□□□□ -0.95
SEMA4D-223ENST00000540475 THAP6Q8TBB0 222 aa9.11□□□□□ -0.95
SEMA4D-223ENST00000540475 UPK3BQ9BT76 320 aa9.11□□□□□ -0.95
SEMA4D-223ENST00000540475 OR51M1Q9H341 326 aa9.11□□□□□ -0.95
SEMA4D-223ENST00000540475 AAMDCQ9H7C9 122 aa9.11□□□□□ -0.95
SEMA4D-223ENST00000540475 KCNIP2Q9NS61 270 aa9.11□□□□□ -0.95
SEMA4D-223ENST00000540475 TRAV26-1A0A087WT03 109 aa9.1□□□□□ -0.95
SEMA4D-223ENST00000540475 GAGE12BA1L429 117 aa9.1□□□□□ -0.95
SEMA4D-223ENST00000540475 GAGE7O76087 117 aa9.1□□□□□ -0.95
SEMA4D-223ENST00000540475 GAGE12FP0CL80 117 aa9.1□□□□□ -0.95
SEMA4D-223ENST00000540475 GAGE12GP0CL81 117 aa9.1□□□□□ -0.95
SEMA4D-223ENST00000540475 GAGE12IP0CL82 117 aa9.1□□□□□ -0.95
SEMA4D-223ENST00000540475 ICAM4Q14773 271 aa9.1□□□□□ -0.95
SEMA4D-223ENST00000540475 Q6ZTI0 123 aa9.1□□□□□ -0.95
SEMA4D-223ENST00000540475 EIF4E3Q8N5X7 224 aaKnown RBP9.1□□□□□ -0.95
SEMA4D-223ENST00000540475 ZFAND2AQ8N6M9 145 aa9.1□□□□□ -0.95
SEMA4D-223ENST00000540475 BLNKQ8WV28 456 aa9.1□□□□□ -0.95
SEMA4D-223ENST00000540475 PPP1R1CQ8WVI7 109 aa9.1□□□□□ -0.95
SEMA4D-223ENST00000540475 GNPNAT1Q96EK6 184 aaPredicted RBP9.1□□□□□ -0.95
SEMA4D-223ENST00000540475 ZNF492Q9P255 531 aa9.1□□□□□ -0.95
SEMA4D-223ENST00000540475 FUT9Q9Y231 359 aa9.1□□□□□ -0.95
SEMA4D-223ENST00000540475 J3KRW8 73 aa9.09□□□□□ -0.95
SEMA4D-223ENST00000540475 SPINK4O60575 86 aa9.09□□□□□ -0.95
SEMA4D-223ENST00000540475 MPC2O95563 127 aa9.09□□□□□ -0.95
SEMA4D-223ENST00000540475 BTN1A1Q13410 526 aa9.09□□□□□ -0.95
SEMA4D-223ENST00000540475 OR5I1Q13606 314 aa9.09□□□□□ -0.95
SEMA4D-223ENST00000540475 CLINT1Q14677 625 aa9.09□□□□□ -0.95
SEMA4D-223ENST00000540475 LRRC37A5PQ49AS3 106 aa9.09□□□□□ -0.95
SEMA4D-223ENST00000540475 IBA57Q5T440 356 aaKnown RBP9.09□□□□□ -0.95
SEMA4D-223ENST00000540475 SSX7Q7RTT5 188 aa9.09□□□□□ -0.95
SEMA4D-223ENST00000540475 LYPD1Q8N2G4 141 aa9.09□□□□□ -0.95
SEMA4D-223ENST00000540475 VGLL1Q99990 258 aa9.09□□□□□ -0.95
SEMA4D-223ENST00000540475 GSN-AS1Q9NRJ2 163 aa9.09□□□□□ -0.95
SEMA4D-223ENST00000540475 RBAKDNA6NC62 111 aa9.08□□□□□ -0.96
SEMA4D-223ENST00000540475 C17orf112F2Z3M2 114 aa9.08□□□□□ -0.96
SEMA4D-223ENST00000540475 TCL1AP56279 114 aa9.08□□□□□ -0.96
SEMA4D-223ENST00000540475 ESRGQ1W209 222 aa9.08□□□□□ -0.96
SEMA4D-223ENST00000540475 TMEM78Q5T7P6 136 aa9.08□□□□□ -0.96
SEMA4D-223ENST00000540475 PRR9Q5T870 116 aa9.08□□□□□ -0.96
SEMA4D-223ENST00000540475 C6orf223Q8N319 242 aa9.08□□□□□ -0.96
SEMA4D-223ENST00000540475 VSIG2Q96IQ7 327 aa9.08□□□□□ -0.96
SEMA4D-223ENST00000540475 ATP5SQ99766 215 aa9.08□□□□□ -0.96
SEMA4D-223ENST00000540475 PAXXQ9BUH6 204 aa9.08□□□□□ -0.96
SEMA4D-223ENST00000540475 TMPRSS5Q9H3S3 457 aa9.08□□□□□ -0.96
SEMA4D-223ENST00000540475 Q9H8V8 135 aa9.08□□□□□ -0.96
SEMA4D-223ENST00000540475 HSPB11Q9Y547 144 aa9.08□□□□□ -0.96
SEMA4D-223ENST00000540475 IGKV2-40A0A087WW87 121 aaPredicted RBP9.07□□□□□ -0.96
SEMA4D-223ENST00000540475 IGKV2D-40P01614 121 aaPredicted RBP9.07□□□□□ -0.96
SEMA4D-223ENST00000540475 GPX1P07203 203 aa9.07□□□□□ -0.96
SEMA4D-223ENST00000540475 BTF3P20290 206 aaKnown RBP9.07□□□□□ -0.96
SEMA4D-223ENST00000540475 RNASE4P34096 147 aaKnown RBP9.07□□□□□ -0.96
SEMA4D-223ENST00000540475 ZNF138P52744 262 aa9.07□□□□□ -0.96
SEMA4D-223ENST00000540475 TNP2Q05952 138 aa9.07□□□□□ -0.96
SEMA4D-223ENST00000540475 FAM122CQ6P4D5 195 aa9.07□□□□□ -0.96
SEMA4D-223ENST00000540475 ABCA13Q86UQ4 5058 aa9.07□□□□□ -0.96
SEMA4D-223ENST00000540475 A0A1W2PPQ1 181 aa9.06□□□□□ -0.96
SEMA4D-223ENST00000540475 PET100P0DJ07 73 aa9.06□□□□□ -0.96
SEMA4D-223ENST00000540475 PHYHIPLQ96FC7 376 aa9.06□□□□□ -0.96
SEMA4D-223ENST00000540475 Q9H3A6 140 aa9.06□□□□□ -0.96
SEMA4D-223ENST00000540475 MRPS16Q9Y3D3 137 aaKnown RBP9.06□□□□□ -0.96
SEMA4D-223ENST00000540475 KLF12Q9Y4X4 402 aa9.06□□□□□ -0.96
SEMA4D-223ENST00000540475 LENEPQ9Y5L5 61 aa9.06□□□□□ -0.96
SEMA4D-223ENST00000540475 IGHV1OR15-1A0A075B7D0 117 aa9.05□□□□□ -0.96
SEMA4D-223ENST00000540475 A0A096LPF7 62 aa9.05□□□□□ -0.96
SEMA4D-223ENST00000540475 A0A0J9YY99 117 aa9.05□□□□□ -0.96
SEMA4D-223ENST00000540475 OR10J4P0C629 311 aa9.05□□□□□ -0.96
SEMA4D-223ENST00000540475 RPL12P30050 165 aaKnown RBP9.05□□□□□ -0.96
SEMA4D-223ENST00000540475 DEFA1P59665 94 aa9.05□□□□□ -0.96
SEMA4D-223ENST00000540475 DEFA3P59666 94 aa9.05□□□□□ -0.96
SEMA4D-223ENST00000540475 ZNF266Q14584 549 aa9.05□□□□□ -0.96
SEMA4D-223ENST00000540475 Q6ZQT7 251 aa9.05□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 77.9 ms