RNA–Protein interactions for RNA: ENST00000539559.6

TMEM260-203, Transcript of transmembrane protein 260, humanhuman

TSL 1 (best)

Gene TMEM260, Length 2,680 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-203ENST00000539559 A6NDN8 102 aa15.82■□□□□ 0.12
TMEM260-203ENST00000539559 F8W735 103 aaPredicted RBP15.82■□□□□ 0.12
TMEM260-203ENST00000539559 NBR2O15453 112 aa15.82■□□□□ 0.12
TMEM260-203ENST00000539559 ZNF575Q86XF7 245 aa15.82■□□□□ 0.12
TMEM260-203ENST00000539559 NDPQ00604 133 aa15.81■□□□□ 0.12
TMEM260-203ENST00000539559 CSTL1Q9H114 145 aa15.81■□□□□ 0.12
TMEM260-203ENST00000539559 ORM1P02763 201 aa15.81■□□□□ 0.12
TMEM260-203ENST00000539559 NBASA2RRP1 2371 aa15.81■□□□□ 0.12
TMEM260-203ENST00000539559 CCL21O00585 134 aa15.81■□□□□ 0.12
TMEM260-203ENST00000539559 HSD52Q0P140 79 aa15.81■□□□□ 0.12
TMEM260-203ENST00000539559 ERCC8Q13216 396 aa15.81■□□□□ 0.12
TMEM260-203ENST00000539559 LINC01560Q8TB33 94 aa15.81■□□□□ 0.12
TMEM260-203ENST00000539559 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP15.8■□□□□ 0.12
TMEM260-203ENST00000539559 OR1N2Q8NGR9 330 aa15.8■□□□□ 0.12
TMEM260-203ENST00000539559 GTF2H5Q6ZYL4 71 aa15.8■□□□□ 0.12
TMEM260-203ENST00000539559 OR2K2Q8NGT1 345 aa15.8■□□□□ 0.12
TMEM260-203ENST00000539559 K7EP34 96 aa15.79■□□□□ 0.12
TMEM260-203ENST00000539559 SMAD5-AS1Q9Y6J3 95 aa15.79■□□□□ 0.12
TMEM260-203ENST00000539559 NCBP2LA6PVI3 153 aaKnown RBP15.78■□□□□ 0.12
TMEM260-203ENST00000539559 K7ERJ3 54 aa15.78■□□□□ 0.12
TMEM260-203ENST00000539559 IGHG4P01861 327 aa15.78■□□□□ 0.12
TMEM260-203ENST00000539559 LEPP41159 167 aa15.78■□□□□ 0.12
TMEM260-203ENST00000539559 DPF1Q92782 380 aa15.78■□□□□ 0.12
TMEM260-203ENST00000539559 RNF185Q96GF1 192 aa15.78■□□□□ 0.12
TMEM260-203ENST00000539559 FAM90A27PA6NNH2 459 aa15.78■□□□□ 0.12
TMEM260-203ENST00000539559 GCSHP23434 173 aa15.78■□□□□ 0.12
TMEM260-203ENST00000539559 MFAP4P55083 255 aa15.78■□□□□ 0.12
TMEM260-203ENST00000539559 IGHV3-66A0A0C4DH42 116 aa15.77■□□□□ 0.12
TMEM260-203ENST00000539559 PRAC2D3DTV9 90 aa15.77■□□□□ 0.12
TMEM260-203ENST00000539559 FBXL19-AS1Q494R0 122 aa15.77■□□□□ 0.12
TMEM260-203ENST00000539559 CFHR4Q92496 578 aa15.77■□□□□ 0.12
TMEM260-203ENST00000539559 SPCS1Q9Y6A9 102 aa15.77■□□□□ 0.12
TMEM260-203ENST00000539559 IGLV11-55A0A075B6I3 123 aa15.77■□□□□ 0.11
TMEM260-203ENST00000539559 FXYD2P54710 66 aa15.77■□□□□ 0.11
TMEM260-203ENST00000539559 PDE6HQ13956 83 aa15.77■□□□□ 0.11
TMEM260-203ENST00000539559 OR9G4Q8NGQ1 327 aa15.77■□□□□ 0.11
TMEM260-203ENST00000539559 C21orf62Q9NYP8 219 aa15.77■□□□□ 0.11
TMEM260-203ENST00000539559 IGHV3OR16-13A0A075B7E8 117 aa15.76■□□□□ 0.11
TMEM260-203ENST00000539559 IGHV3-74A0A0B4J1X5 117 aa15.76■□□□□ 0.11
TMEM260-203ENST00000539559 CD3EP07766 207 aa15.76■□□□□ 0.11
TMEM260-203ENST00000539559 GRNP28799 593 aaKnown RBP15.76■□□□□ 0.11
TMEM260-203ENST00000539559 RNF182Q8N6D2 247 aa15.76■□□□□ 0.11
TMEM260-203ENST00000539559 DPM3Q9P2X0 92 aa15.76■□□□□ 0.11
TMEM260-203ENST00000539559 PRSS1P07477 247 aa15.75■□□□□ 0.11
TMEM260-203ENST00000539559 IGLC6P0CF74 106 aa15.75■□□□□ 0.11
TMEM260-203ENST00000539559 GTSCR1Q86UQ5 136 aa15.75■□□□□ 0.11
TMEM260-203ENST00000539559 A0A1W2PPM0 123 aa15.75■□□□□ 0.11
TMEM260-203ENST00000539559 C5orf64Q2M2E5 130 aa15.75■□□□□ 0.11
TMEM260-203ENST00000539559 ZNF672Q499Z4 452 aaPredicted RBP15.75■□□□□ 0.11
TMEM260-203ENST00000539559 DYNAPQ8N1N2 210 aa15.75■□□□□ 0.11
TMEM260-203ENST00000539559 RAB1BQ9H0U4 201 aa15.75■□□□□ 0.11
TMEM260-203ENST00000539559 ANKHD1Q8IWZ3 2542 aaKnown RBP15.75■□□□□ 0.11
TMEM260-203ENST00000539559 B9A039 149 aa15.74■□□□□ 0.11
TMEM260-203ENST00000539559 OR4X2Q8NGF9 303 aa15.74■□□□□ 0.11
TMEM260-203ENST00000539559 RNF5Q99942 180 aa15.74■□□□□ 0.11
TMEM260-203ENST00000539559 MAP1LC3AQ9H492 121 aa15.74■□□□□ 0.11
TMEM260-203ENST00000539559 ARPC1AQ92747 370 aa15.73■□□□□ 0.11
TMEM260-203ENST00000539559 TNFRSF6BO95407 300 aa15.73■□□□□ 0.11
TMEM260-203ENST00000539559 RPL7P18124 248 aaKnown RBP15.73■□□□□ 0.11
TMEM260-203ENST00000539559 ODF1Q14990 250 aa15.73■□□□□ 0.11
TMEM260-203ENST00000539559 Q6ZQT7 251 aa15.73■□□□□ 0.11
TMEM260-203ENST00000539559 FOXC2Q99958 501 aa15.73■□□□□ 0.11
TMEM260-203ENST00000539559 SRSF8Q9BRL6 282 aaKnown RBP15.73■□□□□ 0.11
TMEM260-203ENST00000539559 ZFHX3Q15911 3703 aa15.73■□□□□ 0.11
TMEM260-203ENST00000539559 HHLA3Q9XRX5 114 aa15.72■□□□□ 0.11
TMEM260-203ENST00000539559 CTSGP08311 255 aa15.72■□□□□ 0.11
TMEM260-203ENST00000539559 ZNF562Q6V9R5 426 aa15.72■□□□□ 0.11
TMEM260-203ENST00000539559 IGHV3-49A0A0A0MS15 119 aa15.71■□□□□ 0.11
TMEM260-203ENST00000539559 FBLL1A6NHQ2 334 aaKnown RBP15.71■□□□□ 0.11
TMEM260-203ENST00000539559 G3V4G9 280 aa15.71■□□□□ 0.11
TMEM260-203ENST00000539559 NDUFA3O95167 84 aa15.71■□□□□ 0.11
TMEM260-203ENST00000539559 ADORA2A-AS1P86434 159 aa15.71■□□□□ 0.11
TMEM260-203ENST00000539559 IL17RELQ6ZVW7 336 aa15.71■□□□□ 0.11
TMEM260-203ENST00000539559 TMEM158Q8WZ71 300 aa15.71■□□□□ 0.11
TMEM260-203ENST00000539559 HRNRQ86YZ3 2850 aaPredicted RBP15.71■□□□□ 0.11
TMEM260-203ENST00000539559 TRAV26-2A0A0B4J265 109 aa15.71■□□□□ 0.11
TMEM260-203ENST00000539559 TRGV3P03979 118 aa15.71■□□□□ 0.11
TMEM260-203ENST00000539559 BMI1P35226 326 aa15.71■□□□□ 0.11
TMEM260-203ENST00000539559 SIVA1O15304 175 aa15.71■□□□□ 0.1
TMEM260-203ENST00000539559 SAMD5Q5TGI4 173 aa15.71■□□□□ 0.1
TMEM260-203ENST00000539559 NPBQ8NG41 125 aa15.71■□□□□ 0.1
TMEM260-203ENST00000539559 ATRXP46100 2492 aa15.7■□□□□ 0.1
TMEM260-203ENST00000539559 NCOR2Q9Y618 2525 aa15.7■□□□□ 0.1
TMEM260-203ENST00000539559 PRORYQ9H606 182 aa15.7■□□□□ 0.1
TMEM260-203ENST00000539559 CHD8Q9HCK8 2581 aa15.7■□□□□ 0.1
TMEM260-203ENST00000539559 NPFFR1Q9GZQ6 430 aa15.7■□□□□ 0.1
TMEM260-203ENST00000539559 TMEM160Q9NX00 188 aa15.7■□□□□ 0.1
TMEM260-203ENST00000539559 LY6DQ14210 128 aa15.69■□□□□ 0.1
TMEM260-203ENST00000539559 PSMG3-AS1Q96PY0 264 aa15.69■□□□□ 0.1
TMEM260-203ENST00000539559 CHAC1Q9BUX1 264 aa15.69■□□□□ 0.1
TMEM260-203ENST00000539559 FCER1GP30273 86 aa15.69■□□□□ 0.1
TMEM260-203ENST00000539559 RPL24P83731 157 aaKnown RBP15.69■□□□□ 0.1
TMEM260-203ENST00000539559 ZC2HC1BQ5TFG8 222 aa15.69■□□□□ 0.1
TMEM260-203ENST00000539559 NEGR1Q7Z3B1 354 aa15.69■□□□□ 0.1
TMEM260-203ENST00000539559 DTX2Q86UW9 622 aa15.69■□□□□ 0.1
TMEM260-203ENST00000539559 C11orf21Q9P2W6 132 aa15.69■□□□□ 0.1
TMEM260-203ENST00000539559 SMIM13P0DJ93 91 aa15.68■□□□□ 0.1
TMEM260-203ENST00000539559 FABP2P12104 132 aa15.68■□□□□ 0.1
TMEM260-203ENST00000539559 TMEM11P17152 192 aa15.68■□□□□ 0.1
TMEM260-203ENST00000539559 NHP2Q9NX24 153 aaKnown RBP15.68■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 99.3 ms