RNA–Protein interactions for RNA: ENST00000539197.5

CCDC7-209, Transcript of coiled-coil domain containing 7, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCDC7, Length 581 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-209ENST00000539197 TMEM35BQ8NCS4 154 aa0.54□□□□□ -2.32
CCDC7-209ENST00000539197 OR5AK2Q8NH90 309 aa0.54□□□□□ -2.32
CCDC7-209ENST00000539197 BRK1Q8WUW1 75 aa0.54□□□□□ -2.32
CCDC7-209ENST00000539197 NUP98P52948 1817 aa0.54□□□□□ -2.32
CCDC7-209ENST00000539197 TRPM1Q7Z4N2 1603 aa0.53□□□□□ -2.32
CCDC7-209ENST00000539197 PBRM1Q86U86 1689 aa0.53□□□□□ -2.32
CCDC7-209ENST00000539197 TRBV7-6A0A0J9YX20 115 aa0.53□□□□□ -2.32
CCDC7-209ENST00000539197 TSTD3H0UI37 97 aa0.53□□□□□ -2.32
CCDC7-209ENST00000539197 SLC25A4P12235 298 aa0.53□□□□□ -2.32
CCDC7-209ENST00000539197 CRYGSP22914 178 aa0.53□□□□□ -2.32
CCDC7-209ENST00000539197 CASC2Q6XLA1 102 aa0.53□□□□□ -2.32
CCDC7-209ENST00000539197 C5orf17Q8NAS9 161 aa0.53□□□□□ -2.32
CCDC7-209ENST00000539197 TMEM229BQ8NBD8 167 aa0.53□□□□□ -2.32
CCDC7-209ENST00000539197 MORN4Q8NDC4 146 aa0.53□□□□□ -2.32
CCDC7-209ENST00000539197 OR10AC1Q8NH08 325 aa0.53□□□□□ -2.32
CCDC7-209ENST00000539197 GINS2Q9Y248 185 aa0.53□□□□□ -2.32
CCDC7-209ENST00000539197 KIAA1107Q9UPP5 1409 aa0.53□□□□□ -2.32
CCDC7-209ENST00000539197 UNC13CQ8NB66 2214 aa0.53□□□□□ -2.33
CCDC7-209ENST00000539197 MYH10P35580 1976 aa0.52□□□□□ -2.33
CCDC7-209ENST00000539197 FREM3P0C091 2139 aa0.52□□□□□ -2.33
CCDC7-209ENST00000539197 TRAV16A0A0A6YYK6 109 aaPredicted RBP0.52□□□□□ -2.33
CCDC7-209ENST00000539197 A0A0J9YY99 117 aa0.52□□□□□ -2.33
CCDC7-209ENST00000539197 RPL22P35268 128 aaKnown RBP0.52□□□□□ -2.33
CCDC7-209ENST00000539197 BLCAPP62952 87 aa0.52□□□□□ -2.33
CCDC7-209ENST00000539197 DR1Q01658 176 aa0.52□□□□□ -2.33
CCDC7-209ENST00000539197 OR51A4Q8NGJ6 313 aa0.52□□□□□ -2.33
CCDC7-209ENST00000539197 SKA2Q8WVK7 121 aaPredicted RBP0.52□□□□□ -2.33
CCDC7-209ENST00000539197 FAM135BQ49AJ0 1406 aa0.52□□□□□ -2.33
CCDC7-209ENST00000539197 E9PCH4 1651 aa0.52□□□□□ -2.33
CCDC7-209ENST00000539197 COL24A1Q17RW2 1714 aa0.52□□□□□ -2.33
CCDC7-209ENST00000539197 N4BP2Q86UW6 1770 aaPredicted RBP0.52□□□□□ -2.33
CCDC7-209ENST00000539197 MCM3APO60318 1980 aa0.52□□□□□ -2.33
CCDC7-209ENST00000539197 KIAA1549Q9HCM3 1950 aa0.52□□□□□ -2.33
CCDC7-209ENST00000539197 A2MP01023 1474 aa0.51□□□□□ -2.33
CCDC7-209ENST00000539197 HBDP02042 147 aa0.51□□□□□ -2.33
CCDC7-209ENST00000539197 MT-ND4LP03901 98 aa0.51□□□□□ -2.33
CCDC7-209ENST00000539197 SLC25A5P05141 298 aaKnown RBP0.51□□□□□ -2.33
CCDC7-209ENST00000539197 SAA1P0DJI8 122 aaPredicted RBP0.51□□□□□ -2.33
CCDC7-209ENST00000539197 RPS28P62857 69 aaKnown RBP0.51□□□□□ -2.33
CCDC7-209ENST00000539197 CSAG1Q6PB30 78 aa0.51□□□□□ -2.33
CCDC7-209ENST00000539197 LINC00299Q6ZSB3 139 aa0.51□□□□□ -2.33
CCDC7-209ENST00000539197 AKAP14Q86UN6 197 aa0.51□□□□□ -2.33
CCDC7-209ENST00000539197 NAT14Q8WUY8 206 aa0.51□□□□□ -2.33
CCDC7-209ENST00000539197 CIB3Q96Q77 187 aaPredicted RBP0.51□□□□□ -2.33
CCDC7-209ENST00000539197 DLC1Q96QB1 1528 aa0.51□□□□□ -2.33
CCDC7-209ENST00000539197 HSPB8Q9UJY1 196 aa0.51□□□□□ -2.33
CCDC7-209ENST00000539197 HSPB11Q9Y547 144 aa0.51□□□□□ -2.33
CCDC7-209ENST00000539197 HEATR1Q9H583 2144 aaKnown RBP0.5□□□□□ -2.33
CCDC7-209ENST00000539197 TNRC6AQ8NDV7 1962 aaKnown RBP0.5□□□□□ -2.33
CCDC7-209ENST00000539197 TCOF1Q13428 1488 aaKnown RBP0.5□□□□□ -2.33
CCDC7-209ENST00000539197 ERBINQ96RT1 1412 aa0.5□□□□□ -2.33
CCDC7-209ENST00000539197 LOC107986453A0A1B0GWG9 222 aa0.5□□□□□ -2.33
CCDC7-209ENST00000539197 NUPR2A6NF83 97 aa0.5□□□□□ -2.33
CCDC7-209ENST00000539197 ZNF727A8MUV8 499 aa0.5□□□□□ -2.33
CCDC7-209ENST00000539197 J3KT08 172 aa0.5□□□□□ -2.33
CCDC7-209ENST00000539197 TCRAP04437 139 aa0.5□□□□□ -2.33
CCDC7-209ENST00000539197 PDE6GP18545 87 aa0.5□□□□□ -2.33
CCDC7-209ENST00000539197 SDC4P31431 198 aa0.5□□□□□ -2.33
CCDC7-209ENST00000539197 SRP9P49458 86 aaKnown RBP0.5□□□□□ -2.33
CCDC7-209ENST00000539197 QRFPP83859 136 aa0.5□□□□□ -2.33
CCDC7-209ENST00000539197 OR8B8Q15620 311 aa0.5□□□□□ -2.33
CCDC7-209ENST00000539197 Q5XG85 94 aa0.5□□□□□ -2.33
CCDC7-209ENST00000539197 LINC00575Q6W349 94 aa0.5□□□□□ -2.33
CCDC7-209ENST00000539197 Q86TA4 180 aa0.5□□□□□ -2.33
CCDC7-209ENST00000539197 OR5A2Q8NGI9 324 aa0.5□□□□□ -2.33
CCDC7-209ENST00000539197 LPAR5Q9H1C0 372 aa0.5□□□□□ -2.33
CCDC7-209ENST00000539197 BOKQ9UMX3 212 aaPredicted RBP0.5□□□□□ -2.33
CCDC7-209ENST00000539197 MPC1Q9Y5U8 109 aa0.5□□□□□ -2.33
CCDC7-209ENST00000539197 USP24Q9UPU5 2620 aa0.5□□□□□ -2.33
CCDC7-209ENST00000539197 MED12Q93074 2177 aa0.49□□□□□ -2.33
CCDC7-209ENST00000539197 FGD6Q6ZV73 1430 aa0.49□□□□□ -2.33
CCDC7-209ENST00000539197 TET1Q8NFU7 2136 aa0.49□□□□□ -2.33
CCDC7-209ENST00000539197 TRBV30A0A0K0K1B3 111 aa0.49□□□□□ -2.33
CCDC7-209ENST00000539197 A0A1B0GW64 132 aa0.49□□□□□ -2.33
CCDC7-209ENST00000539197 A0A1W2PPM0 123 aa0.49□□□□□ -2.33
CCDC7-209ENST00000539197 ARL5CA6NH57 179 aa0.49□□□□□ -2.33
CCDC7-209ENST00000539197 BBIP1A8MTZ0 92 aa0.49□□□□□ -2.33
CCDC7-209ENST00000539197 CDC42EP2O14613 210 aa0.49□□□□□ -2.33
CCDC7-209ENST00000539197 UQCRQO14949 82 aa0.49□□□□□ -2.33
CCDC7-209ENST00000539197 DEGS1O15121 323 aa0.49□□□□□ -2.33
CCDC7-209ENST00000539197 EDF1O60869 148 aaKnown RBP0.49□□□□□ -2.33
CCDC7-209ENST00000539197 CCL4P13236 92 aa0.49□□□□□ -2.33
CCDC7-209ENST00000539197 GTF2A1P52655 376 aaPredicted RBP0.49□□□□□ -2.33
CCDC7-209ENST00000539197 RPL37AP61513 92 aaKnown RBP0.49□□□□□ -2.33
CCDC7-209ENST00000539197 TMEM244Q5VVB8 128 aa0.49□□□□□ -2.33
CCDC7-209ENST00000539197 IZUMO2Q6UXV1 221 aa0.49□□□□□ -2.33
CCDC7-209ENST00000539197 TCTEX1D1Q8N7M0 179 aa0.49□□□□□ -2.33
CCDC7-209ENST00000539197 COMMD3Q9UBI1 195 aa0.49□□□□□ -2.33
CCDC7-209ENST00000539197 NUP210LQ5VU65 1888 aa0.49□□□□□ -2.33
CCDC7-209ENST00000539197 PHRF1Q9P1Y6 1649 aaKnown RBP0.49□□□□□ -2.33
CCDC7-209ENST00000539197 MACF1Q9UPN3 7388 aaKnown RBP0.49□□□□□ -2.33
CCDC7-209ENST00000539197 SYNE2Q8WXH0 6885 aaKnown RBP0.48□□□□□ -2.33
CCDC7-209ENST00000539197 MYH3P11055 1940 aa0.48□□□□□ -2.33
CCDC7-209ENST00000539197 MYH2Q9UKX2 1941 aa0.48□□□□□ -2.33
CCDC7-209ENST00000539197 OVOS2A0A0G2JMS6 1433 aa0.48□□□□□ -2.33
CCDC7-209ENST00000539197 ANKRD30AQ9BXX3 1397 aa0.48□□□□□ -2.33
CCDC7-209ENST00000539197 DSPPQ9NZW4 1301 aa0.48□□□□□ -2.33
CCDC7-209ENST00000539197 TRAV36DV7A0A075B6V5 113 aa0.48□□□□□ -2.33
CCDC7-209ENST00000539197 A0A1W2PPB8 328 aa0.48□□□□□ -2.33
CCDC7-209ENST00000539197 A0A1W2PRS3 328 aa0.48□□□□□ -2.33
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms