RNA–Protein interactions for RNA: ENST00000538333.3

LIMK1-208, Transcript of LIM domain kinase 1, humanhuman

TSL 2 BASIC

Gene LIMK1, Length 2,170 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1-208ENST00000538333 LINC00614P0C842 121 aa10.76□□□□□ -0.69
LIMK1-208ENST00000538333 BMI1P35226 326 aa10.76□□□□□ -0.69
LIMK1-208ENST00000538333 ERCC8Q13216 396 aa10.76□□□□□ -0.69
LIMK1-208ENST00000538333 C2orf88Q9BSF0 95 aa10.76□□□□□ -0.69
LIMK1-208ENST00000538333 CRYBG3Q68DQ2 2970 aa10.76□□□□□ -0.69
LIMK1-208ENST00000538333 IGHV1-24A0A0C4DH33 117 aa10.75□□□□□ -0.69
LIMK1-208ENST00000538333 DSCR9P59020 149 aa10.75□□□□□ -0.69
LIMK1-208ENST00000538333 SRSF2Q01130 221 aaKnown RBP10.75□□□□□ -0.69
LIMK1-208ENST00000538333 MIEN1Q9BRT3 115 aa10.75□□□□□ -0.69
LIMK1-208ENST00000538333 H3BUA1 57 aa10.75□□□□□ -0.69
LIMK1-208ENST00000538333 M0QZK8 103 aa10.75□□□□□ -0.69
LIMK1-208ENST00000538333 EREGO14944 169 aa10.75□□□□□ -0.69
LIMK1-208ENST00000538333 TRBV12-3P01733 135 aa10.75□□□□□ -0.69
LIMK1-208ENST00000538333 IGLC6P0CF74 106 aa10.75□□□□□ -0.69
LIMK1-208ENST00000538333 ARL3P36405 182 aa10.75□□□□□ -0.69
LIMK1-208ENST00000538333 BLCAPP62952 87 aa10.75□□□□□ -0.69
LIMK1-208ENST00000538333 PMCHL1Q16048 86 aa10.75□□□□□ -0.69
LIMK1-208ENST00000538333 Q6ZS46 218 aa10.75□□□□□ -0.69
LIMK1-208ENST00000538333 C8orf86Q6ZUL3 223 aa10.75□□□□□ -0.69
LIMK1-208ENST00000538333 LINC00469Q8N7U9 141 aa10.75□□□□□ -0.69
LIMK1-208ENST00000538333 MRPL53Q96EL3 112 aaKnown RBP10.75□□□□□ -0.69
LIMK1-208ENST00000538333 TMEM213A2RRL7 107 aa10.74□□□□□ -0.69
LIMK1-208ENST00000538333 BTF3P20290 206 aaKnown RBP10.74□□□□□ -0.69
LIMK1-208ENST00000538333 RPS20P60866 119 aaKnown RBP10.74□□□□□ -0.69
LIMK1-208ENST00000538333 GLMPQ8WWB7 406 aa10.74□□□□□ -0.69
LIMK1-208ENST00000538333 CSMD2Q7Z408 3487 aa10.74□□□□□ -0.69
LIMK1-208ENST00000538333 A0A096LNT2 108 aa10.73□□□□□ -0.69
LIMK1-208ENST00000538333 GATA3P23771 443 aa10.73□□□□□ -0.69
LIMK1-208ENST00000538333 UNQ9165/PRO28630Q6UXU0 137 aa10.73□□□□□ -0.69
LIMK1-208ENST00000538333 USMG5Q96IX5 58 aa10.73□□□□□ -0.69
LIMK1-208ENST00000538333 SNHG12Q9BXW3 62 aa10.73□□□□□ -0.69
LIMK1-208ENST00000538333 CLEC5AQ9NY25 188 aa10.73□□□□□ -0.69
LIMK1-208ENST00000538333 ZNF138P52744 262 aa10.73□□□□□ -0.69
LIMK1-208ENST00000538333 IL17RELQ6ZVW7 336 aa10.73□□□□□ -0.69
LIMK1-208ENST00000538333 AGPAT4-IT1Q9H0P7 198 aa10.73□□□□□ -0.69
LIMK1-208ENST00000538333 KLK15Q9H2R5 256 aa10.73□□□□□ -0.69
LIMK1-208ENST00000538333 FABP5P3A8MUU1 101 aa10.72□□□□□ -0.69
LIMK1-208ENST00000538333 NDUFA4O00483 81 aa10.72□□□□□ -0.69
LIMK1-208ENST00000538333 SLC25A16P16260 332 aa10.72□□□□□ -0.69
LIMK1-208ENST00000538333 RAB4AP20338 218 aa10.72□□□□□ -0.69
LIMK1-208ENST00000538333 FAM104BQ5XKR9 115 aa10.72□□□□□ -0.69
LIMK1-208ENST00000538333 SPATA12Q7Z6I5 190 aa10.72□□□□□ -0.69
LIMK1-208ENST00000538333 FER1L6-AS1Q8NA97 138 aa10.72□□□□□ -0.69
LIMK1-208ENST00000538333 A0A1B0GV90 55 aa10.72□□□□□ -0.69
LIMK1-208ENST00000538333 CRXO43186 299 aaPredicted RBP10.72□□□□□ -0.69
LIMK1-208ENST00000538333 LINC01559Q495D7 138 aa10.72□□□□□ -0.69
LIMK1-208ENST00000538333 SPATA45Q537H7 98 aa10.72□□□□□ -0.69
LIMK1-208ENST00000538333 CYB5R2Q6BCY4 276 aa10.72□□□□□ -0.69
LIMK1-208ENST00000538333 U3KQK5 164 aa10.72□□□□□ -0.69
LIMK1-208ENST00000538333 SMAD7O15105 426 aaKnown RBP10.71□□□□□ -0.69
LIMK1-208ENST00000538333 IGLV1-40P01703 118 aa10.71□□□□□ -0.69
LIMK1-208ENST00000538333 CFHR3Q02985 330 aa10.71□□□□□ -0.69
LIMK1-208ENST00000538333 SRSF1Q07955 248 aaKnown RBP eCLIP10.71□□□□□ -0.69
LIMK1-208ENST00000538333 ZNF705AQ6ZN79 300 aaPredicted RBP10.71□□□□□ -0.69
LIMK1-208ENST00000538333 C9orf47Q6ZRZ4 202 aa10.71□□□□□ -0.69
LIMK1-208ENST00000538333 LINC00173Q6ZV60 143 aa10.71□□□□□ -0.69
LIMK1-208ENST00000538333 TMEM70Q9BUB7 260 aa10.71□□□□□ -0.69
LIMK1-208ENST00000538333 CNFNQ9BYD5 112 aa10.71□□□□□ -0.69
LIMK1-208ENST00000538333 UTP20O75691 2785 aaKnown RBP10.71□□□□□ -0.7
LIMK1-208ENST00000538333 MUC21A0A0G2JKD1 596 aa10.7□□□□□ -0.7
LIMK1-208ENST00000538333 MUC21A0A140T8X8 626 aa10.7□□□□□ -0.7
LIMK1-208ENST00000538333 CSN3P07498 182 aa10.7□□□□□ -0.7
LIMK1-208ENST00000538333 MUC21Q5SSG8 566 aa10.7□□□□□ -0.7
LIMK1-208ENST00000538333 GPHB5Q86YW7 130 aa10.7□□□□□ -0.7
LIMK1-208ENST00000538333 AMN1Q8IY45 258 aa10.7□□□□□ -0.7
LIMK1-208ENST00000538333 PPP1R14DQ9NXH3 145 aa10.7□□□□□ -0.7
LIMK1-208ENST00000538333 FBN2P35556 2912 aa10.7□□□□□ -0.7
LIMK1-208ENST00000538333 CSPG4Q6UVK1 2322 aa10.7□□□□□ -0.7
LIMK1-208ENST00000538333 LEPROTL1O95214 131 aa10.7□□□□□ -0.7
LIMK1-208ENST00000538333 ORM1P02763 201 aa10.7□□□□□ -0.7
LIMK1-208ENST00000538333 SSTP61278 116 aa10.7□□□□□ -0.7
LIMK1-208ENST00000538333 ATOH7Q8N100 152 aa10.7□□□□□ -0.7
LIMK1-208ENST00000538333 UBR5O95071 2799 aaPredicted RBP10.7□□□□□ -0.7
LIMK1-208ENST00000538333 D6R8Y8 96 aa10.69□□□□□ -0.7
LIMK1-208ENST00000538333 M0R143 59 aa10.69□□□□□ -0.7
LIMK1-208ENST00000538333 IGHV3-11P01762 117 aa10.69□□□□□ -0.7
LIMK1-208ENST00000538333 OR5AL1P0C617 328 aa10.69□□□□□ -0.7
LIMK1-208ENST00000538333 C9orf139Q6ZV77 190 aa10.69□□□□□ -0.7
LIMK1-208ENST00000538333 MRPL52Q86TS9 123 aaKnown RBP10.69□□□□□ -0.7
LIMK1-208ENST00000538333 LINC01356Q8N9X3 169 aa10.69□□□□□ -0.7
LIMK1-208ENST00000538333 ZNF580Q9UK33 172 aa10.69□□□□□ -0.7
LIMK1-208ENST00000538333 IGKV3D-20A0A0C4DH25 116 aa10.69□□□□□ -0.7
LIMK1-208ENST00000538333 IGLC3P0DOY3 106 aa10.69□□□□□ -0.7
LIMK1-208ENST00000538333 PF4V1P10720 104 aa10.69□□□□□ -0.7
LIMK1-208ENST00000538333 MAJINQ3KP22 176 aa10.69□□□□□ -0.7
LIMK1-208ENST00000538333 MRPL51Q4U2R6 128 aaKnown RBP10.69□□□□□ -0.7
LIMK1-208ENST00000538333 TMEM78Q5T7P6 136 aa10.69□□□□□ -0.7
LIMK1-208ENST00000538333 LCNL1Q6ZST4 164 aa10.69□□□□□ -0.7
LIMK1-208ENST00000538333 C20orf173Q96LM9 149 aa10.69□□□□□ -0.7
LIMK1-208ENST00000538333 AP5S1Q9NUS5 200 aa10.69□□□□□ -0.7
LIMK1-208ENST00000538333 C11orf21Q9P2W6 132 aa10.69□□□□□ -0.7
LIMK1-208ENST00000538333 MAP1AP78559 2803 aaPredicted RBP10.69□□□□□ -0.7
LIMK1-208ENST00000538333 SYS1-DBNDD2H3BUS1 97 aa10.68□□□□□ -0.7
LIMK1-208ENST00000538333 SOCS3O14543 225 aa10.68□□□□□ -0.7
LIMK1-208ENST00000538333 HIST1H1AQ02539 215 aaPredicted RBP10.68□□□□□ -0.7
LIMK1-208ENST00000538333 OR4X2Q8NGF9 303 aa10.68□□□□□ -0.7
LIMK1-208ENST00000538333 C16orf92Q96LL3 132 aa10.68□□□□□ -0.7
LIMK1-208ENST00000538333 LRRK2Q5S007 2527 aa10.68□□□□□ -0.7
LIMK1-208ENST00000538333 COX6B1P14854 86 aa10.67□□□□□ -0.7
LIMK1-208ENST00000538333 TWIST1Q15672 202 aa10.67□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms