RNA–Protein interactions for RNA: ENST00000537556.1

SRGAP1-202, Transcript of SLIT-ROBO Rho GTPase activating protein 1, humanhuman

TSL 2

Gene SRGAP1, Length 2,976 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP1-202ENST00000537556 CRYGAP11844 174 aa6.67□□□□□ -1.34
SRGAP1-202ENST00000537556 COX7CP15954 63 aa6.67□□□□□ -1.34
SRGAP1-202ENST00000537556 TMEM170BQ5T4T1 132 aa6.67□□□□□ -1.34
SRGAP1-202ENST00000537556 GGNQ86UU5 652 aa6.67□□□□□ -1.34
SRGAP1-202ENST00000537556 EXOC3-AS1Q8N2X6 119 aa6.67□□□□□ -1.34
SRGAP1-202ENST00000537556 VKORC1Q9BQB6 163 aa6.67□□□□□ -1.34
SRGAP1-202ENST00000537556 TMEM14CQ9P0S9 112 aa6.67□□□□□ -1.34
SRGAP1-202ENST00000537556 IGHV3-64DA0A0J9YX35 117 aa6.67□□□□□ -1.34
SRGAP1-202ENST00000537556 WNT9BO14905 357 aa6.67□□□□□ -1.34
SRGAP1-202ENST00000537556 ACYP1P07311 99 aa6.67□□□□□ -1.34
SRGAP1-202ENST00000537556 EFNA4P52798 201 aa6.67□□□□□ -1.34
SRGAP1-202ENST00000537556 PLGLAQ15195 96 aa6.67□□□□□ -1.34
SRGAP1-202ENST00000537556 DCTN5Q9BTE1 182 aa6.67□□□□□ -1.34
SRGAP1-202ENST00000537556 NDUFA4L2Q9NRX3 87 aa6.67□□□□□ -1.34
SRGAP1-202ENST00000537556 KLK5Q9Y337 293 aaPredicted RBP6.67□□□□□ -1.34
SRGAP1-202ENST00000537556 MYO7AQ13402 2215 aa6.67□□□□□ -1.34
SRGAP1-202ENST00000537556 LAMA3Q16787 3333 aa6.67□□□□□ -1.34
SRGAP1-202ENST00000537556 CCL3P10147 92 aa6.66□□□□□ -1.34
SRGAP1-202ENST00000537556 KNL1Q8NG31 2342 aa6.66□□□□□ -1.34
SRGAP1-202ENST00000537556 IGHV3-13P01766 116 aa6.66□□□□□ -1.34
SRGAP1-202ENST00000537556 SAA2P0DJI9 122 aaPredicted RBP6.66□□□□□ -1.34
SRGAP1-202ENST00000537556 LOXL3P58215 753 aa6.66□□□□□ -1.34
SRGAP1-202ENST00000537556 MZT1Q08AG7 82 aa6.66□□□□□ -1.34
SRGAP1-202ENST00000537556 LYPD1Q8N2G4 141 aa6.66□□□□□ -1.34
SRGAP1-202ENST00000537556 RNF185Q96GF1 192 aa6.66□□□□□ -1.34
SRGAP1-202ENST00000537556 RPP25Q9BUL9 199 aaKnown RBP6.66□□□□□ -1.34
SRGAP1-202ENST00000537556 ZNF503-AS2A6NEH8 195 aa6.66□□□□□ -1.34
SRGAP1-202ENST00000537556 TRACP01848 142 aa6.66□□□□□ -1.34
SRGAP1-202ENST00000537556 SLC25A16P16260 332 aa6.66□□□□□ -1.34
SRGAP1-202ENST00000537556 DLX6P56179 175 aa6.66□□□□□ -1.34
SRGAP1-202ENST00000537556 HERVK_113P61574 105 aa6.66□□□□□ -1.34
SRGAP1-202ENST00000537556 C2orf82Q6UX34 121 aa6.66□□□□□ -1.34
SRGAP1-202ENST00000537556 DTX2Q86UW9 622 aa6.66□□□□□ -1.34
SRGAP1-202ENST00000537556 PLEKHB2Q96CS7 222 aa6.66□□□□□ -1.34
SRGAP1-202ENST00000537556 LINC00527Q9UJ94 153 aa6.66□□□□□ -1.34
SRGAP1-202ENST00000537556 A0A0J9YY99 117 aa6.65□□□□□ -1.34
SRGAP1-202ENST00000537556 H3BT86 120 aa6.65□□□□□ -1.34
SRGAP1-202ENST00000537556 IGHV3-30P01768 117 aa6.65□□□□□ -1.34
SRGAP1-202ENST00000537556 IGHV3-30-5P0DP03 117 aa6.65□□□□□ -1.34
SRGAP1-202ENST00000537556 B3GALT5-AS1P59052 145 aa6.65□□□□□ -1.34
SRGAP1-202ENST00000537556 TMEM258P61165 79 aa6.65□□□□□ -1.34
SRGAP1-202ENST00000537556 TFF2Q03403 129 aa6.65□□□□□ -1.34
SRGAP1-202ENST00000537556 MSRB2Q9Y3D2 182 aa6.65□□□□□ -1.34
SRGAP1-202ENST00000537556 IGLV2-18A0A075B6J9 118 aa6.65□□□□□ -1.35
SRGAP1-202ENST00000537556 TRAV17A0A0B4J275 112 aa6.65□□□□□ -1.35
SRGAP1-202ENST00000537556 TM4SF5O14894 197 aa6.65□□□□□ -1.35
SRGAP1-202ENST00000537556 SH2D1AO60880 128 aa6.65□□□□□ -1.35
SRGAP1-202ENST00000537556 IGHV3-48P01763 117 aa6.65□□□□□ -1.35
SRGAP1-202ENST00000537556 COX6B1P14854 86 aa6.65□□□□□ -1.35
SRGAP1-202ENST00000537556 HOXA4Q00056 320 aaPredicted RBP6.65□□□□□ -1.35
SRGAP1-202ENST00000537556 ASCL5Q7RTU5 278 aa6.65□□□□□ -1.35
SRGAP1-202ENST00000537556 PRR25Q96S07 402 aa6.65□□□□□ -1.35
SRGAP1-202ENST00000537556 OVOL1O14753 267 aa6.64□□□□□ -1.35
SRGAP1-202ENST00000537556 CRYGDP07320 174 aa6.64□□□□□ -1.35
SRGAP1-202ENST00000537556 SAA1P0DJI8 122 aaPredicted RBP6.64□□□□□ -1.35
SRGAP1-202ENST00000537556 PRDX2P32119 198 aa6.64□□□□□ -1.35
SRGAP1-202ENST00000537556 DUX4L9Q6RFH8 374 aaPredicted RBP6.64□□□□□ -1.35
SRGAP1-202ENST00000537556 C1orf229Q6ZS94 237 aaPredicted RBP6.64□□□□□ -1.35
SRGAP1-202ENST00000537556 Q71RC1 249 aaPredicted RBP6.64□□□□□ -1.35
SRGAP1-202ENST00000537556 DPH3Q96FX2 82 aa6.64□□□□□ -1.35
SRGAP1-202ENST00000537556 METRNQ9UJH8 293 aa6.64□□□□□ -1.35
SRGAP1-202ENST00000537556 FER1L5A0AVI2 2057 aa6.64□□□□□ -1.35
SRGAP1-202ENST00000537556 IGKV3D-15A0A087WSY6 115 aa6.64□□□□□ -1.35
SRGAP1-202ENST00000537556 IGHV1-45A0A0A0MS14 117 aa6.64□□□□□ -1.35
SRGAP1-202ENST00000537556 CDX4O14627 284 aaPredicted RBP6.64□□□□□ -1.35
SRGAP1-202ENST00000537556 IGHV3-33P01772 117 aa6.64□□□□□ -1.35
SRGAP1-202ENST00000537556 DEFB121Q5J5C9 76 aa6.64□□□□□ -1.35
SRGAP1-202ENST00000537556 ZNF826PQ6ZT77 177 aa6.64□□□□□ -1.35
SRGAP1-202ENST00000537556 ASCL2Q99929 193 aa6.64□□□□□ -1.35
SRGAP1-202ENST00000537556 RANBP2P49792 3224 aaKnown RBP6.64□□□□□ -1.35
SRGAP1-202ENST00000537556 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa6.63□□□□□ -1.35
SRGAP1-202ENST00000537556 IGHV4-34P06331 123 aa6.63□□□□□ -1.35
SRGAP1-202ENST00000537556 Q1RN00 199 aa6.63□□□□□ -1.35
SRGAP1-202ENST00000537556 CXorf67Q86X51 503 aaPredicted RBP6.63□□□□□ -1.35
SRGAP1-202ENST00000537556 SLC25A29Q8N8R3 303 aa6.63□□□□□ -1.35
SRGAP1-202ENST00000537556 IQCF6A8MYZ5 107 aa6.63□□□□□ -1.35
SRGAP1-202ENST00000537556 IGHV4-39P01824 125 aa6.63□□□□□ -1.35
SRGAP1-202ENST00000537556 C4orf26Q17RF5 130 aa6.63□□□□□ -1.35
SRGAP1-202ENST00000537556 CEMP1Q6PRD7 247 aaPredicted RBP6.63□□□□□ -1.35
SRGAP1-202ENST00000537556 HRCT1Q6UXD1 115 aa6.63□□□□□ -1.35
SRGAP1-202ENST00000537556 C17orf82Q86X59 251 aaPredicted RBP6.63□□□□□ -1.35
SRGAP1-202ENST00000537556 SCGB3A1Q96QR1 104 aa6.63□□□□□ -1.35
SRGAP1-202ENST00000537556 CNFNQ9BYD5 112 aa6.63□□□□□ -1.35
SRGAP1-202ENST00000537556 TNCP24821 2201 aa6.63□□□□□ -1.35
SRGAP1-202ENST00000537556 TRBV19A0A075B6N1 114 aa6.63□□□□□ -1.35
SRGAP1-202ENST00000537556 A0A0B4J2C4 111 aa6.63□□□□□ -1.35
SRGAP1-202ENST00000537556 TFF1P04155 84 aa6.63□□□□□ -1.35
SRGAP1-202ENST00000537556 IGKV1-16P04430 117 aa6.63□□□□□ -1.35
SRGAP1-202ENST00000537556 TCF15Q12870 199 aa6.63□□□□□ -1.35
SRGAP1-202ENST00000537556 PAPPA-AS1Q5QFB9 102 aa6.63□□□□□ -1.35
SRGAP1-202ENST00000537556 LINC00643Q86TS7 51 aa6.63□□□□□ -1.35
SRGAP1-202ENST00000537556 C8orf49Q96NF6 230 aa6.63□□□□□ -1.35
SRGAP1-202ENST00000537556 SCNM1Q9BWG6 230 aa6.63□□□□□ -1.35
SRGAP1-202ENST00000537556 MRPL36Q9P0J6 103 aaKnown RBP6.63□□□□□ -1.35
SRGAP1-202ENST00000537556 PRO0628Q9UI54 55 aa6.63□□□□□ -1.35
SRGAP1-202ENST00000537556 TRAV16A0A0A6YYK6 109 aaPredicted RBP6.62□□□□□ -1.35
SRGAP1-202ENST00000537556 MBD3L4A6NDZ8 208 aaPredicted RBP6.62□□□□□ -1.35
SRGAP1-202ENST00000537556 MBD3L3A6NE82 208 aaPredicted RBP6.62□□□□□ -1.35
SRGAP1-202ENST00000537556 MBD3L5A6NJ08 208 aaPredicted RBP6.62□□□□□ -1.35
SRGAP1-202ENST00000537556 CXCL5P42830 114 aa6.62□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms